RNA–Protein interactions for RNA: ENST00000323022.9

CACNA1F-201, Transcript of calcium voltage-gated channel subunit alpha1 F, humanhuman

TSL 1 (best) BASIC

Gene CACNA1F, Length 6,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1F-201ENST00000323022 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
CACNA1F-201ENST00000323022 SOX12O15370 315 aa16.61■□□□□ 0.25
CACNA1F-201ENST00000323022 POGKQ9P215 609 aa16.61■□□□□ 0.25
CACNA1F-201ENST00000323022 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
CACNA1F-201ENST00000323022 HSP90AA1P07900 732 aaKnown RBP16.58■□□□□ 0.25
CACNA1F-201ENST00000323022 WDR43Q15061 677 aaKnown RBP eCLIP16.58■□□□□ 0.24
CACNA1F-201ENST00000323022 RRP7BPQ9NSQ0 103 aa16.56■□□□□ 0.24
CACNA1F-201ENST00000323022 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
CACNA1F-201ENST00000323022 NCBP3Q53F19 620 aaKnown RBP16.52■□□□□ 0.23
CACNA1F-201ENST00000323022 TAOK2Q9UL54 1235 aa16.5■□□□□ 0.23
CACNA1F-201ENST00000323022 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
CACNA1F-201ENST00000323022 CFDP1Q9UEE9 299 aaPredicted RBP16.49■□□□□ 0.23
CACNA1F-201ENST00000323022 ACIN1Q9UKV3 1341 aaKnown RBP16.48■□□□□ 0.23
CACNA1F-201ENST00000323022 ANP32BQ92688 251 aaKnown RBP16.47■□□□□ 0.23
CACNA1F-201ENST00000323022 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
CACNA1F-201ENST00000323022 MEX3CQ5U5Q3 659 aaKnown RBP16.47■□□□□ 0.23
CACNA1F-201ENST00000323022 GGT6Q6P531 493 aa16.47■□□□□ 0.23
CACNA1F-201ENST00000323022 HDGFP51858 240 aaKnown RBP16.46■□□□□ 0.23
CACNA1F-201ENST00000323022 MYH16Q9H6N6 1097 aa16.46■□□□□ 0.23
CACNA1F-201ENST00000323022 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
CACNA1F-201ENST00000323022 GOLGA2Q08379 1002 aa16.45■□□□□ 0.22
CACNA1F-201ENST00000323022 LAS1LQ9Y4W2 734 aaKnown RBP16.44■□□□□ 0.22
CACNA1F-201ENST00000323022 ANP32AP39687 249 aaKnown RBP16.44■□□□□ 0.22
CACNA1F-201ENST00000323022 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
CACNA1F-201ENST00000323022 SAFB2Q14151 953 aaKnown RBP eCLIP16.42■□□□□ 0.22
CACNA1F-201ENST00000323022 ZNF330Q9Y3S2 320 aaPredicted RBP16.42■□□□□ 0.22
CACNA1F-201ENST00000323022 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.42■□□□□ 0.22
CACNA1F-201ENST00000323022 ISY1Q9ULR0 285 aaKnown RBP16.42■□□□□ 0.22
CACNA1F-201ENST00000323022 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
CACNA1F-201ENST00000323022 CYB5RLQ6IPT4 315 aa16.41■□□□□ 0.22
CACNA1F-201ENST00000323022 KLHL34Q8N239 644 aa16.39■□□□□ 0.21
CACNA1F-201ENST00000323022 TMX4Q9H1E5 349 aaPredicted RBP16.39■□□□□ 0.21
CACNA1F-201ENST00000323022 TNNT2P45379 298 aaPredicted RBP16.39■□□□□ 0.21
CACNA1F-201ENST00000323022 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
CACNA1F-201ENST00000323022 MSH5O43196 834 aa16.36■□□□□ 0.21
CACNA1F-201ENST00000323022 EIF4G1Q04637 1599 aaKnown RBP16.35■□□□□ 0.21
CACNA1F-201ENST00000323022 STK26Q9P289 416 aa16.34■□□□□ 0.21
CACNA1F-201ENST00000323022 UPF2Q9HAU5 1272 aaKnown RBP16.33■□□□□ 0.2
CACNA1F-201ENST00000323022 CFAP53Q96M91 514 aa16.32■□□□□ 0.2
CACNA1F-201ENST00000323022 CLSTN1O94985 981 aa16.31■□□□□ 0.2
CACNA1F-201ENST00000323022 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.31■□□□□ 0.2
CACNA1F-201ENST00000323022 NEUROD2Q15784 382 aa16.29■□□□□ 0.2
CACNA1F-201ENST00000323022 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
CACNA1F-201ENST00000323022 SENP3-EIF4A1A0A087X0R7 540 aa16.28■□□□□ 0.2
CACNA1F-201ENST00000323022 G3V3G9 751 aa16.28■□□□□ 0.2
CACNA1F-201ENST00000323022 DCAF8Q5TAQ9 597 aa16.28■□□□□ 0.2
CACNA1F-201ENST00000323022 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
CACNA1F-201ENST00000323022 KANK1Q14678 1352 aa16.27■□□□□ 0.2
CACNA1F-201ENST00000323022 DDX10Q13206 875 aaKnown RBP16.27■□□□□ 0.19
CACNA1F-201ENST00000323022 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
CACNA1F-201ENST00000323022 BAZ1AQ9NRL2 1556 aaPredicted RBP16.25■□□□□ 0.19
CACNA1F-201ENST00000323022 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
CACNA1F-201ENST00000323022 OS9Q13438 667 aaPredicted RBP16.25■□□□□ 0.19
CACNA1F-201ENST00000323022 EIF5BO60841 1220 aaKnown RBP16.24■□□□□ 0.19
CACNA1F-201ENST00000323022 EIF4G2P78344 907 aaKnown RBP eCLIP16.24■□□□□ 0.19
CACNA1F-201ENST00000323022 EID1Q9Y6B2 187 aa16.24■□□□□ 0.19
CACNA1F-201ENST00000323022 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
CACNA1F-201ENST00000323022 U2SURPO15042 1029 aaKnown RBP16.23■□□□□ 0.19
CACNA1F-201ENST00000323022 WRNQ14191 1432 aaPredicted RBP eCLIP16.22■□□□□ 0.19
CACNA1F-201ENST00000323022 TPRNQ4KMQ1 711 aa16.22■□□□□ 0.19
CACNA1F-201ENST00000323022 KNSTRNQ9Y448 316 aa16.22■□□□□ 0.19
CACNA1F-201ENST00000323022 CECR2Q9BXF3 1484 aa16.2■□□□□ 0.18
CACNA1F-201ENST00000323022 NUTM2FA1L443 756 aa16.18■□□□□ 0.18
CACNA1F-201ENST00000323022 CLIP1P30622 1438 aa16.18■□□□□ 0.18
CACNA1F-201ENST00000323022 NUTM2DQ5VT03 806 aaPredicted RBP16.18■□□□□ 0.18
CACNA1F-201ENST00000323022 NAP1L2Q9ULW6 460 aaPredicted RBP16.17■□□□□ 0.18
CACNA1F-201ENST00000323022 NUDCQ9Y266 331 aa16.16■□□□□ 0.18
CACNA1F-201ENST00000323022 MRS2Q9HD23 443 aa16.16■□□□□ 0.18
CACNA1F-201ENST00000323022 CDCA8Q53HL2 280 aa16.16■□□□□ 0.18
CACNA1F-201ENST00000323022 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
CACNA1F-201ENST00000323022 EVA1CP58658 441 aa16.14■□□□□ 0.17
CACNA1F-201ENST00000323022 OSCARQ8IYS5 282 aa16.13■□□□□ 0.17
CACNA1F-201ENST00000323022 KIF27Q86VH2 1401 aa16.12■□□□□ 0.17
CACNA1F-201ENST00000323022 CCNB3Q8WWL7 1395 aa16.12■□□□□ 0.17
CACNA1F-201ENST00000323022 GOLGA3Q08378 1498 aa16.12■□□□□ 0.17
CACNA1F-201ENST00000323022 EEA1Q15075 1411 aa16.12■□□□□ 0.17
CACNA1F-201ENST00000323022 GTF2E1P29083 439 aaPredicted RBP16.1■□□□□ 0.17
CACNA1F-201ENST00000323022 RTF1Q92541 710 aaKnown RBP16.09■□□□□ 0.17
CACNA1F-201ENST00000323022 FTSJ3Q8IY81 847 aaKnown RBP16.09■□□□□ 0.17
CACNA1F-201ENST00000323022 FGD1P98174 961 aa16.07■□□□□ 0.16
CACNA1F-201ENST00000323022 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
CACNA1F-201ENST00000323022 CC2D1BQ5T0F9 858 aaKnown RBP16.05■□□□□ 0.16
CACNA1F-201ENST00000323022 LTV1Q96GA3 475 aaPredicted RBP16.05■□□□□ 0.16
CACNA1F-201ENST00000323022 PPP1R1BQ9UD71 204 aaPredicted RBP16.04■□□□□ 0.16
CACNA1F-201ENST00000323022 FKBP8Q14318 412 aa16.04■□□□□ 0.16
CACNA1F-201ENST00000323022 PDS5BQ9NTI5 1447 aa16.03■□□□□ 0.16
CACNA1F-201ENST00000323022 CARMIL2Q6F5E8 1435 aa16.03■□□□□ 0.16
CACNA1F-201ENST00000323022 GLIPR1L2Q4G1C9 344 aa16.03■□□□□ 0.16
CACNA1F-201ENST00000323022 ZRSR1Q15695 479 aaKnown RBP16.02■□□□□ 0.16
CACNA1F-201ENST00000323022 CEP162Q5TB80 1403 aa16.02■□□□□ 0.16
CACNA1F-201ENST00000323022 FAM69CQ0P6D2 419 aa16.02■□□□□ 0.16
CACNA1F-201ENST00000323022 KCNJ4P48050 445 aa16.02■□□□□ 0.16
CACNA1F-201ENST00000323022 KIF3BO15066 747 aa16.02■□□□□ 0.15
CACNA1F-201ENST00000323022 DCAF11Q8TEB1 546 aa16.02■□□□□ 0.15
CACNA1F-201ENST00000323022 AMER1Q5JTC6 1135 aaPredicted RBP16.01■□□□□ 0.15
CACNA1F-201ENST00000323022 HDGFL2Q7Z4V5 671 aaPredicted RBP16.01■□□□□ 0.15
CACNA1F-201ENST00000323022 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
CACNA1F-201ENST00000323022 WASHC2CQ9Y4E1 1318 aa16.01■□□□□ 0.15
CACNA1F-201ENST00000323022 SYTL4Q96C24 671 aaPredicted RBP16■□□□□ 0.15
CACNA1F-201ENST00000323022 SF3B2Q13435 895 aaKnown RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms