RNA–Protein interactions for RNA: ENST00000322349.12

EEA1-201, Transcript of early endosome antigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EEA1, Length 9,875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-201ENST00000322349 SENP3-EIF4A1A0A087X0R7 540 aa13.61□□□□□ -0.23
EEA1-201ENST00000322349 MLECQ14165 292 aa13.59□□□□□ -0.23
EEA1-201ENST00000322349 CSRNP3Q8WYN3 585 aa13.59□□□□□ -0.23
EEA1-201ENST00000322349 RGL3Q3MIN7 710 aa13.58□□□□□ -0.23
EEA1-201ENST00000322349 EIF5BO60841 1220 aaKnown RBP13.58□□□□□ -0.24
EEA1-201ENST00000322349 DDX10Q13206 875 aaKnown RBP13.58□□□□□ -0.24
EEA1-201ENST00000322349 LAS1LQ9Y4W2 734 aaKnown RBP13.58□□□□□ -0.24
EEA1-201ENST00000322349 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.58□□□□□ -0.24
EEA1-201ENST00000322349 FKBP8Q14318 412 aa13.56□□□□□ -0.24
EEA1-201ENST00000322349 HIRIP3Q9BW71 556 aaPredicted RBP13.55□□□□□ -0.24
EEA1-201ENST00000322349 SOX12O15370 315 aa13.53□□□□□ -0.24
EEA1-201ENST00000322349 CLSTN1O94985 981 aa13.52□□□□□ -0.24
EEA1-201ENST00000322349 RRP7BPQ9NSQ0 103 aa13.51□□□□□ -0.25
EEA1-201ENST00000322349 ISY1Q9ULR0 285 aaKnown RBP13.5□□□□□ -0.25
EEA1-201ENST00000322349 IRX6P78412 446 aaPredicted RBP13.49□□□□□ -0.25
EEA1-201ENST00000322349 GOLGA2Q08379 1002 aa13.48□□□□□ -0.25
EEA1-201ENST00000322349 NBR1Q14596 966 aa13.48□□□□□ -0.25
EEA1-201ENST00000322349 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
EEA1-201ENST00000322349 CCDC136Q96JN2 1154 aa13.47□□□□□ -0.25
EEA1-201ENST00000322349 TNNT2P45379 298 aaPredicted RBP13.46□□□□□ -0.25
EEA1-201ENST00000322349 POGKQ9P215 609 aa13.46□□□□□ -0.25
EEA1-201ENST00000322349 CCDC9Q9Y3X0 531 aaKnown RBP13.46□□□□□ -0.26
EEA1-201ENST00000322349 NEUROD2Q15784 382 aa13.45□□□□□ -0.26
EEA1-201ENST00000322349 NAP1L2Q9ULW6 460 aaPredicted RBP13.45□□□□□ -0.26
EEA1-201ENST00000322349 MTUS2Q5JR59 1369 aa13.44□□□□□ -0.26
EEA1-201ENST00000322349 MRS2Q9HD23 443 aa13.43□□□□□ -0.26
EEA1-201ENST00000322349 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
EEA1-201ENST00000322349 NCLP19338 710 aaKnown RBP13.43□□□□□ -0.26
EEA1-201ENST00000322349 PLEKHD1A6NEE1 506 aa13.42□□□□□ -0.26
EEA1-201ENST00000322349 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
EEA1-201ENST00000322349 ZRSR1Q15695 479 aaKnown RBP13.4□□□□□ -0.26
EEA1-201ENST00000322349 AMER1Q5JTC6 1135 aaPredicted RBP13.39□□□□□ -0.27
EEA1-201ENST00000322349 ZNF330Q9Y3S2 320 aaPredicted RBP13.38□□□□□ -0.27
EEA1-201ENST00000322349 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
EEA1-201ENST00000322349 CFAP53Q96M91 514 aa13.37□□□□□ -0.27
EEA1-201ENST00000322349 AEBP2Q6ZN18 517 aaPredicted RBP13.35□□□□□ -0.27
EEA1-201ENST00000322349 SAFB2Q14151 953 aaKnown RBP eCLIP13.35□□□□□ -0.27
EEA1-201ENST00000322349 PAK3O75914 559 aaPredicted RBP13.34□□□□□ -0.27
EEA1-201ENST00000322349 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
EEA1-201ENST00000322349 FGD1P98174 961 aa13.33□□□□□ -0.28
EEA1-201ENST00000322349 U2SURPO15042 1029 aaKnown RBP13.33□□□□□ -0.28
EEA1-201ENST00000322349 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
EEA1-201ENST00000322349 CASC1Q6TDU7 716 aa13.32□□□□□ -0.28
EEA1-201ENST00000322349 KNSTRNQ9Y448 316 aa13.3□□□□□ -0.28
EEA1-201ENST00000322349 CSB-PGBD3P0DP91 1061 aa13.3□□□□□ -0.28
EEA1-201ENST00000322349 PRM3Q9NNZ6 103 aa13.29□□□□□ -0.28
EEA1-201ENST00000322349 KCNJ4P48050 445 aa13.29□□□□□ -0.28
EEA1-201ENST00000322349 PLCB2Q00722 1185 aa13.29□□□□□ -0.28
EEA1-201ENST00000322349 STK26Q9P289 416 aa13.27□□□□□ -0.29
EEA1-201ENST00000322349 CFDP1Q9UEE9 299 aaPredicted RBP13.27□□□□□ -0.29
EEA1-201ENST00000322349 TMX4Q9H1E5 349 aaPredicted RBP13.27□□□□□ -0.29
EEA1-201ENST00000322349 FRAT1Q92837 279 aaPredicted RBP13.26□□□□□ -0.29
EEA1-201ENST00000322349 PTMAP06454 111 aaKnown RBP13.26□□□□□ -0.29
EEA1-201ENST00000322349 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
EEA1-201ENST00000322349 EIF4G2P78344 907 aaKnown RBP eCLIP13.25□□□□□ -0.29
EEA1-201ENST00000322349 G3V3G9 751 aa13.24□□□□□ -0.29
EEA1-201ENST00000322349 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
EEA1-201ENST00000322349 DCAF8Q5TAQ9 597 aa13.24□□□□□ -0.29
EEA1-201ENST00000322349 NUDCQ9Y266 331 aa13.23□□□□□ -0.29
EEA1-201ENST00000322349 CARD11Q9BXL7 1154 aa13.23□□□□□ -0.29
EEA1-201ENST00000322349 GGT6Q6P531 493 aa13.22□□□□□ -0.29
EEA1-201ENST00000322349 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
EEA1-201ENST00000322349 ANO8Q9HCE9 1232 aaPredicted RBP13.21□□□□□ -0.29
EEA1-201ENST00000322349 DNTTIP2Q5QJE6 756 aaKnown RBP13.21□□□□□ -0.3
EEA1-201ENST00000322349 ACIN1Q9UKV3 1341 aaKnown RBP13.2□□□□□ -0.3
EEA1-201ENST00000322349 BECN1Q14457 450 aa13.2□□□□□ -0.3
EEA1-201ENST00000322349 GOLGA6L22H0YM25 854 aa13.2□□□□□ -0.3
EEA1-201ENST00000322349 TRIM44Q96DX7 344 aaPredicted RBP13.2□□□□□ -0.3
EEA1-201ENST00000322349 MSH5O43196 834 aa13.19□□□□□ -0.3
EEA1-201ENST00000322349 HDGFP51858 240 aaKnown RBP13.18□□□□□ -0.3
EEA1-201ENST00000322349 PDE4CQ08493 712 aa13.18□□□□□ -0.3
EEA1-201ENST00000322349 CDCA8Q53HL2 280 aa13.18□□□□□ -0.3
EEA1-201ENST00000322349 KLHL34Q8N239 644 aa13.17□□□□□ -0.3
EEA1-201ENST00000322349 APBB1O00213 710 aa13.16□□□□□ -0.3
EEA1-201ENST00000322349 RTF1Q92541 710 aaKnown RBP13.16□□□□□ -0.3
EEA1-201ENST00000322349 CHMP3Q9Y3E7 222 aa13.14□□□□□ -0.31
EEA1-201ENST00000322349 RGS3P49796 1198 aa13.13□□□□□ -0.31
EEA1-201ENST00000322349 GNL2Q13823 731 aaKnown RBP13.13□□□□□ -0.31
EEA1-201ENST00000322349 MEX3CQ5U5Q3 659 aaKnown RBP13.13□□□□□ -0.31
EEA1-201ENST00000322349 ZCCHC6Q5VYS8 1495 aaKnown RBP13.12□□□□□ -0.31
EEA1-201ENST00000322349 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
EEA1-201ENST00000322349 HSP90AB1P08238 724 aaKnown RBP13.1□□□□□ -0.31
EEA1-201ENST00000322349 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
EEA1-201ENST00000322349 NUTM2FA1L443 756 aa13.1□□□□□ -0.31
EEA1-201ENST00000322349 NUTM2DQ5VT03 806 aaPredicted RBP13.1□□□□□ -0.31
EEA1-201ENST00000322349 RSF1Q96T23 1441 aaPredicted RBP13.1□□□□□ -0.31
EEA1-201ENST00000322349 KANK1Q14678 1352 aa13.09□□□□□ -0.31
EEA1-201ENST00000322349 GLIPR1L2Q4G1C9 344 aa13.09□□□□□ -0.31
EEA1-201ENST00000322349 TAF7LQ5H9L4 462 aa13.08□□□□□ -0.32
EEA1-201ENST00000322349 ERICH6BQ5W0A0 696 aa13.08□□□□□ -0.32
EEA1-201ENST00000322349 DDRGK1Q96HY6 314 aa13.08□□□□□ -0.32
EEA1-201ENST00000322349 SPRYD3Q8NCJ5 442 aa13.07□□□□□ -0.32
EEA1-201ENST00000322349 DCAF11Q8TEB1 546 aa13.07□□□□□ -0.32
EEA1-201ENST00000322349 GOLGA6L4A6NEF3 574 aa13.07□□□□□ -0.32
EEA1-201ENST00000322349 PNNQ9H307 717 aaKnown RBP13.07□□□□□ -0.32
EEA1-201ENST00000322349 LTV1Q96GA3 475 aaPredicted RBP13.06□□□□□ -0.32
EEA1-201ENST00000322349 VPS53Q5VIR6 699 aa13.06□□□□□ -0.32
EEA1-201ENST00000322349 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
EEA1-201ENST00000322349 GORABQ5T7V8 394 aa13.05□□□□□ -0.32
EEA1-201ENST00000322349 GOLGA6L6A8MZA4 724 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms