RNA–Protein interactions for RNA: ENST00000315480.8

USP20-201, Transcript of ubiquitin specific peptidase 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP20, Length 4,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP20-201ENST00000315480 CECR2Q9BXF3 1484 aa17.54■□□□□ 0.4
USP20-201ENST00000315480 DDX10Q13206 875 aaKnown RBP17.54■□□□□ 0.4
USP20-201ENST00000315480 WDR43Q15061 677 aaKnown RBP eCLIP17.53■□□□□ 0.4
USP20-201ENST00000315480 CEP162Q5TB80 1403 aa17.52■□□□□ 0.4
USP20-201ENST00000315480 CARMIL1Q5VZK9 1371 aa17.51■□□□□ 0.39
USP20-201ENST00000315480 TNIKQ9UKE5 1360 aa17.51■□□□□ 0.39
USP20-201ENST00000315480 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
USP20-201ENST00000315480 RGL3Q3MIN7 710 aa17.49■□□□□ 0.39
USP20-201ENST00000315480 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
USP20-201ENST00000315480 CUX2O14529 1486 aa17.48■□□□□ 0.39
USP20-201ENST00000315480 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
USP20-201ENST00000315480 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
USP20-201ENST00000315480 HAP1P54257 671 aaPredicted RBP17.47■□□□□ 0.39
USP20-201ENST00000315480 FAM9BQ8IZU0 186 aa17.47■□□□□ 0.39
USP20-201ENST00000315480 HNRNPUQ00839 825 aaKnown RBP eCLIP17.46■□□□□ 0.39
USP20-201ENST00000315480 A0A0G2JS52 829 aa17.45■□□□□ 0.38
USP20-201ENST00000315480 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.45■□□□□ 0.38
USP20-201ENST00000315480 CCNB3Q8WWL7 1395 aa17.44■□□□□ 0.38
USP20-201ENST00000315480 CARMIL2Q6F5E8 1435 aa17.43■□□□□ 0.38
USP20-201ENST00000315480 HDGFP51858 240 aaKnown RBP17.42■□□□□ 0.38
USP20-201ENST00000315480 SENP3Q9H4L4 574 aaPredicted RBP17.4■□□□□ 0.38
USP20-201ENST00000315480 MRS2Q9HD23 443 aa17.4■□□□□ 0.38
USP20-201ENST00000315480 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
USP20-201ENST00000315480 ZBTB7CA1YPR0 619 aa17.39■□□□□ 0.37
USP20-201ENST00000315480 CFAP53Q96M91 514 aa17.37■□□□□ 0.37
USP20-201ENST00000315480 PLEKHG5O94827 1062 aa17.36■□□□□ 0.37
USP20-201ENST00000315480 SOGA1O94964 1423 aa17.36■□□□□ 0.37
USP20-201ENST00000315480 KANK1Q14678 1352 aa17.36■□□□□ 0.37
USP20-201ENST00000315480 POGKQ9P215 609 aa17.36■□□□□ 0.37
USP20-201ENST00000315480 EIF4G1Q04637 1599 aaKnown RBP17.34■□□□□ 0.37
USP20-201ENST00000315480 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
USP20-201ENST00000315480 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
USP20-201ENST00000315480 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
USP20-201ENST00000315480 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
USP20-201ENST00000315480 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
USP20-201ENST00000315480 CARD11Q9BXL7 1154 aa17.31■□□□□ 0.36
USP20-201ENST00000315480 KNSTRNQ9Y448 316 aa17.31■□□□□ 0.36
USP20-201ENST00000315480 MLECQ14165 292 aa17.3■□□□□ 0.36
USP20-201ENST00000315480 EFCAB2Q5VUJ9 269 aa17.3■□□□□ 0.36
USP20-201ENST00000315480 HSP90AA1P07900 732 aaKnown RBP17.27■□□□□ 0.36
USP20-201ENST00000315480 LMOD2Q6P5Q4 547 aa17.27■□□□□ 0.36
USP20-201ENST00000315480 MROH2BQ7Z745 1585 aa17.27■□□□□ 0.36
USP20-201ENST00000315480 CCDC88BA6NC98 1476 aa17.27■□□□□ 0.36
USP20-201ENST00000315480 MYH16Q9H6N6 1097 aa17.26■□□□□ 0.35
USP20-201ENST00000315480 GGT6Q6P531 493 aa17.23■□□□□ 0.35
USP20-201ENST00000315480 HIRIP3Q9BW71 556 aaPredicted RBP17.22■□□□□ 0.35
USP20-201ENST00000315480 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
USP20-201ENST00000315480 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
USP20-201ENST00000315480 FKBP8Q14318 412 aa17.19■□□□□ 0.34
USP20-201ENST00000315480 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
USP20-201ENST00000315480 FMN1Q68DA7 1419 aa17.18■□□□□ 0.34
USP20-201ENST00000315480 JPH4Q96JJ6 628 aa17.15■□□□□ 0.34
USP20-201ENST00000315480 MAPK8IP3Q9UPT6 1336 aa17.14■□□□□ 0.33
USP20-201ENST00000315480 RSPH4AQ5TD94 716 aa17.13■□□□□ 0.33
USP20-201ENST00000315480 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
USP20-201ENST00000315480 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
USP20-201ENST00000315480 ARXQ96QS3 562 aa17.12■□□□□ 0.33
USP20-201ENST00000315480 TIMELESSQ9UNS1 1208 aa17.12■□□□□ 0.33
USP20-201ENST00000315480 TMF1P82094 1093 aa17.11■□□□□ 0.33
USP20-201ENST00000315480 PNNQ9H307 717 aaKnown RBP17.09■□□□□ 0.33
USP20-201ENST00000315480 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
USP20-201ENST00000315480 VPS8Q8N3P4 1428 aa17.08■□□□□ 0.32
USP20-201ENST00000315480 TOP2AP11388 1531 aaKnown RBP17.08■□□□□ 0.32
USP20-201ENST00000315480 ABCC8Q09428 1581 aa17.08■□□□□ 0.32
USP20-201ENST00000315480 ARHGAP35Q9NRY4 1499 aa17.07■□□□□ 0.32
USP20-201ENST00000315480 SRPK2P78362 688 aaKnown RBP17.07■□□□□ 0.32
USP20-201ENST00000315480 ANP32BQ92688 251 aaKnown RBP17.06■□□□□ 0.32
USP20-201ENST00000315480 SIN3AQ96ST3 1273 aa17.06■□□□□ 0.32
USP20-201ENST00000315480 PKD2Q13563 968 aa17.05■□□□□ 0.32
USP20-201ENST00000315480 ANKRD30AQ9BXX3 1397 aa17.05■□□□□ 0.32
USP20-201ENST00000315480 KIF3BO15066 747 aa17.03■□□□□ 0.32
USP20-201ENST00000315480 SPAG9O60271 1321 aaKnown RBP17.03■□□□□ 0.32
USP20-201ENST00000315480 RAPGEF2Q9Y4G8 1499 aa17.02■□□□□ 0.31
USP20-201ENST00000315480 ANP32EQ9BTT0 268 aa17.01■□□□□ 0.31
USP20-201ENST00000315480 NPHP1O15259 732 aa17■□□□□ 0.31
USP20-201ENST00000315480 EID1Q9Y6B2 187 aa17■□□□□ 0.31
USP20-201ENST00000315480 U2SURPO15042 1029 aaKnown RBP17■□□□□ 0.31
USP20-201ENST00000315480 NEUROD2Q15784 382 aa17■□□□□ 0.31
USP20-201ENST00000315480 CYB5RLQ6IPT4 315 aa16.99■□□□□ 0.31
USP20-201ENST00000315480 CHMP4BQ9H444 224 aaKnown RBP16.99■□□□□ 0.31
USP20-201ENST00000315480 FANCD2Q9BXW9 1451 aa16.99■□□□□ 0.31
USP20-201ENST00000315480 NUP155O75694 1391 aa16.99■□□□□ 0.31
USP20-201ENST00000315480 MIER1Q8N108 512 aa16.98■□□□□ 0.31
USP20-201ENST00000315480 TNNT2P45379 298 aaPredicted RBP16.98■□□□□ 0.31
USP20-201ENST00000315480 HDGFL2Q7Z4V5 671 aaPredicted RBP16.98■□□□□ 0.31
USP20-201ENST00000315480 SETD5Q9C0A6 1442 aa16.97■□□□□ 0.31
USP20-201ENST00000315480 LAS1LQ9Y4W2 734 aaKnown RBP16.97■□□□□ 0.31
USP20-201ENST00000315480 FTSJ3Q8IY81 847 aaKnown RBP16.97■□□□□ 0.31
USP20-201ENST00000315480 STK26Q9P289 416 aa16.97■□□□□ 0.31
USP20-201ENST00000315480 SAFB2Q14151 953 aaKnown RBP eCLIP16.96■□□□□ 0.31
USP20-201ENST00000315480 WASHC2CQ9Y4E1 1318 aa16.96■□□□□ 0.31
USP20-201ENST00000315480 EIF5BO60841 1220 aaKnown RBP16.96■□□□□ 0.3
USP20-201ENST00000315480 PTPRGP23470 1445 aa16.96■□□□□ 0.3
USP20-201ENST00000315480 MS4A1P11836 297 aa16.95■□□□□ 0.3
USP20-201ENST00000315480 CCDC18Q5T9S5 1454 aa16.94■□□□□ 0.3
USP20-201ENST00000315480 MORC1Q86VD1 984 aa16.93■□□□□ 0.3
USP20-201ENST00000315480 KANK4Q5T7N3 995 aaPredicted RBP16.92■□□□□ 0.3
USP20-201ENST00000315480 SOX12O15370 315 aa16.92■□□□□ 0.3
USP20-201ENST00000315480 HNRNPMP52272 730 aaKnown RBP eCLIP16.92■□□□□ 0.3
USP20-201ENST00000315480 CC2D1BQ5T0F9 858 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms