RNA–Protein interactions for RNA: ENST00000314358.9

KDM3B-201, Transcript of lysine demethylase 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3B, Length 6,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-201ENST00000314358 NCLP19338 710 aaKnown RBP27.89■■■□□ 2.06
KDM3B-201ENST00000314358 TAOK2Q9UL54 1235 aa27.88■■■□□ 2.05
KDM3B-201ENST00000314358 C14orf37Q86TY3 774 aa27.84■■■□□ 2.05
KDM3B-201ENST00000314358 MYH16Q9H6N6 1097 aa27.83■■■□□ 2.05
KDM3B-201ENST00000314358 TRIM44Q96DX7 344 aaPredicted RBP27.81■■■□□ 2.04
KDM3B-201ENST00000314358 RTN4Q9NQC3 1192 aaKnown RBP27.81■■■□□ 2.04
KDM3B-201ENST00000314358 MIER1Q8N108 512 aa27.73■■■□□ 2.03
KDM3B-201ENST00000314358 CCDC180Q9P1Z9 1646 aa27.71■■■□□ 2.03
KDM3B-201ENST00000314358 PTMAP06454 111 aaKnown RBP27.7■■■□□ 2.02
KDM3B-201ENST00000314358 DNTTIP2Q5QJE6 756 aaKnown RBP27.69■■■□□ 2.02
KDM3B-201ENST00000314358 BECN1Q14457 450 aa27.61■■■□□ 2.01
KDM3B-201ENST00000314358 LAS1LQ9Y4W2 734 aaKnown RBP27.59■■■□□ 2.01
KDM3B-201ENST00000314358 PLCB2Q00722 1185 aa27.59■■■□□ 2.01
KDM3B-201ENST00000314358 AMER1Q5JTC6 1135 aaPredicted RBP27.56■■■□□ 2
KDM3B-201ENST00000314358 PPM1GO15355 546 aaPredicted RBP27.56■■■□□ 2
KDM3B-201ENST00000314358 NAP1L5Q96NT1 182 aaPredicted RBP27.55■■■□□ 2
KDM3B-201ENST00000314358 ZRSR1Q15695 479 aaKnown RBP27.54■■■□□ 2
KDM3B-201ENST00000314358 CHMP7Q8WUX9 453 aaPredicted RBP27.54■■■□□ 2
KDM3B-201ENST00000314358 DDRGK1Q96HY6 314 aa27.53■■■□□ 2
KDM3B-201ENST00000314358 GOLGA6L22H0YM25 854 aa27.53■■■□□ 2
KDM3B-201ENST00000314358 KCNH8Q96L42 1107 aa27.52■■■□□ 2
KDM3B-201ENST00000314358 RB1CC1Q8TDY2 1594 aa27.51■■■□□ 2
KDM3B-201ENST00000314358 NCBP3Q53F19 620 aaKnown RBP27.5■■□□□ 1.99
KDM3B-201ENST00000314358 NEUROD2Q15784 382 aa27.49■■□□□ 1.99
KDM3B-201ENST00000314358 TNNT2P45379 298 aaPredicted RBP27.48■■□□□ 1.99
KDM3B-201ENST00000314358 RGL3Q3MIN7 710 aa27.45■■□□□ 1.98
KDM3B-201ENST00000314358 RRP7BPQ9NSQ0 103 aa27.45■■□□□ 1.98
KDM3B-201ENST00000314358 SUPT16HQ9Y5B9 1047 aaKnown RBP27.41■■□□□ 1.98
KDM3B-201ENST00000314358 HAP1P54257 671 aaPredicted RBP27.4■■□□□ 1.98
KDM3B-201ENST00000314358 PPP1R15AO75807 674 aaPredicted RBP27.4■■□□□ 1.98
KDM3B-201ENST00000314358 RGS3P49796 1198 aa27.39■■□□□ 1.98
KDM3B-201ENST00000314358 ARID4BQ4LE39 1312 aaPredicted RBP27.38■■□□□ 1.97
KDM3B-201ENST00000314358 TSPY4P0CV99 314 aa27.38■■□□□ 1.97
KDM3B-201ENST00000314358 TSPY10P0CW01 314 aa27.38■■□□□ 1.97
KDM3B-201ENST00000314358 FTSJ3Q8IY81 847 aaKnown RBP27.37■■□□□ 1.97
KDM3B-201ENST00000314358 NAP1L2Q9ULW6 460 aaPredicted RBP27.34■■□□□ 1.97
KDM3B-201ENST00000314358 EIF4G2P78344 907 aaKnown RBP eCLIP27.33■■□□□ 1.97
KDM3B-201ENST00000314358 CASC1Q6TDU7 716 aa27.32■■□□□ 1.96
KDM3B-201ENST00000314358 FRAT1Q92837 279 aaPredicted RBP27.29■■□□□ 1.96
KDM3B-201ENST00000314358 MTUS2Q5JR59 1369 aa27.28■■□□□ 1.96
KDM3B-201ENST00000314358 SPRYD3Q8NCJ5 442 aa27.27■■□□□ 1.96
KDM3B-201ENST00000314358 ANP32EQ9BTT0 268 aa27.27■■□□□ 1.96
KDM3B-201ENST00000314358 LMOD2Q6P5Q4 547 aa27.26■■□□□ 1.95
KDM3B-201ENST00000314358 NPHP1O15259 732 aa27.23■■□□□ 1.95
KDM3B-201ENST00000314358 HSP90AB1P08238 724 aaKnown RBP27.21■■□□□ 1.95
KDM3B-201ENST00000314358 DCAF1Q9Y4B6 1507 aa27.2■■□□□ 1.94
KDM3B-201ENST00000314358 FGD1P98174 961 aa27.18■■□□□ 1.94
KDM3B-201ENST00000314358 CLSTN1O94985 981 aa27.18■■□□□ 1.94
KDM3B-201ENST00000314358 OS9Q13438 667 aaPredicted RBP27.17■■□□□ 1.94
KDM3B-201ENST00000314358 ARID3AQ99856 593 aa27.17■■□□□ 1.94
KDM3B-201ENST00000314358 ERICH6BQ5W0A0 696 aa27.16■■□□□ 1.94
KDM3B-201ENST00000314358 CLIP1P30622 1438 aa27.16■■□□□ 1.94
KDM3B-201ENST00000314358 CFAP53Q96M91 514 aa27.16■■□□□ 1.94
KDM3B-201ENST00000314358 KNSTRNQ9Y448 316 aa27.14■■□□□ 1.94
KDM3B-201ENST00000314358 NACADO15069 1562 aa27.13■■□□□ 1.93
KDM3B-201ENST00000314358 CC2D1BQ5T0F9 858 aaKnown RBP27.12■■□□□ 1.93
KDM3B-201ENST00000314358 KCNJ4P48050 445 aa27.11■■□□□ 1.93
KDM3B-201ENST00000314358 BAZ1BQ9UIG0 1483 aaKnown RBP27.11■■□□□ 1.93
KDM3B-201ENST00000314358 B4GALNT3Q6L9W6 998 aa27.1■■□□□ 1.93
KDM3B-201ENST00000314358 NOP58Q9Y2X3 529 aaKnown RBP27.09■■□□□ 1.93
KDM3B-201ENST00000314358 RSF1Q96T23 1441 aaPredicted RBP27.08■■□□□ 1.93
KDM3B-201ENST00000314358 MAPK8IP3Q9UPT6 1336 aa27.08■■□□□ 1.93
KDM3B-201ENST00000314358 SOX12O15370 315 aa27.06■■□□□ 1.92
KDM3B-201ENST00000314358 U2SURPO15042 1029 aaKnown RBP27.04■■□□□ 1.92
KDM3B-201ENST00000314358 GOLGA6L6A8MZA4 724 aa27.02■■□□□ 1.92
KDM3B-201ENST00000314358 CARD11Q9BXL7 1154 aa27.02■■□□□ 1.92
KDM3B-201ENST00000314358 PLEKHD1A6NEE1 506 aa27■■□□□ 1.91
KDM3B-201ENST00000314358 DRC7Q8IY82 874 aa27■■□□□ 1.91
KDM3B-201ENST00000314358 GOLGA3Q08378 1498 aa27■■□□□ 1.91
KDM3B-201ENST00000314358 ISY1Q9ULR0 285 aaKnown RBP26.99■■□□□ 1.91
KDM3B-201ENST00000314358 GOLGA2Q08379 1002 aa26.98■■□□□ 1.91
KDM3B-201ENST00000314358 WRNQ14191 1432 aaPredicted RBP eCLIP26.97■■□□□ 1.913e-6■■■■□ 19.5
KDM3B-201ENST00000314358 TRHP20396 242 aaPredicted RBP26.97■■□□□ 1.91
KDM3B-201ENST00000314358 EEA1Q15075 1411 aa26.96■■□□□ 1.91
KDM3B-201ENST00000314358 GOLGA6L4A6NEF3 574 aa26.96■■□□□ 1.91
KDM3B-201ENST00000314358 APBB1O00213 710 aa26.94■■□□□ 1.9
KDM3B-201ENST00000314358 ERCC6Q03468 1493 aa26.92■■□□□ 1.9
KDM3B-201ENST00000314358 POGKQ9P215 609 aa26.91■■□□□ 1.9
KDM3B-201ENST00000314358 PPP4R2Q9NY27 417 aa26.91■■□□□ 1.9
KDM3B-201ENST00000314358 MSNP26038 577 aaKnown RBP26.9■■□□□ 1.9
KDM3B-201ENST00000314358 HSCBQ8IWL3 235 aa26.88■■□□□ 1.89
KDM3B-201ENST00000314358 SIN3AQ96ST3 1273 aa26.88■■□□□ 1.89
KDM3B-201ENST00000314358 KIF27Q86VH2 1401 aa26.88■■□□□ 1.89
KDM3B-201ENST00000314358 CHAF1AQ13111 956 aaPredicted RBP26.87■■□□□ 1.89
KDM3B-201ENST00000314358 DEKP35659 375 aaKnown RBP26.87■■□□□ 1.89
KDM3B-201ENST00000314358 CEP162Q5TB80 1403 aa26.86■■□□□ 1.89
KDM3B-201ENST00000314358 MLECQ14165 292 aa26.86■■□□□ 1.89
KDM3B-201ENST00000314358 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.85■■□□□ 1.89
KDM3B-201ENST00000314358 NUDCQ9Y266 331 aa26.85■■□□□ 1.89
KDM3B-201ENST00000314358 GZF1Q9H116 711 aaPredicted RBP26.85■■□□□ 1.89
KDM3B-201ENST00000314358 PDE4CQ08493 712 aa26.85■■□□□ 1.89
KDM3B-201ENST00000314358 NRDCO43847 1150 aa26.83■■□□□ 1.89
KDM3B-201ENST00000314358 SAFB2Q14151 953 aaKnown RBP eCLIP26.8■■□□□ 1.88
KDM3B-201ENST00000314358 CDCA8Q53HL2 280 aa26.79■■□□□ 1.88
KDM3B-201ENST00000314358 CFDP1Q9UEE9 299 aaPredicted RBP26.78■■□□□ 1.88
KDM3B-201ENST00000314358 GNL2Q13823 731 aaKnown RBP26.76■■□□□ 1.87
KDM3B-201ENST00000314358 ANO8Q9HCE9 1232 aaPredicted RBP26.74■■□□□ 1.87
KDM3B-201ENST00000314358 CEP164Q9UPV0 1460 aa26.71■■□□□ 1.87
KDM3B-201ENST00000314358 BAZ1AQ9NRL2 1556 aaPredicted RBP26.71■■□□□ 1.87
KDM3B-201ENST00000314358 PNNQ9H307 717 aaKnown RBP26.7■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms