RNA–Protein interactions for RNA: ENST00000306901.8

CHRNA7-201, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHRNA7, Length 6,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-201ENST00000306901 SENP3Q9H4L4 574 aaPredicted RBP18.92■□□□□ 0.62
CHRNA7-201ENST00000306901 ARID4BQ4LE39 1312 aaPredicted RBP18.91■□□□□ 0.62
CHRNA7-201ENST00000306901 MYH16Q9H6N6 1097 aa18.9■□□□□ 0.62
CHRNA7-201ENST00000306901 SUPT16HQ9Y5B9 1047 aaKnown RBP18.89■□□□□ 0.61
CHRNA7-201ENST00000306901 STAG3Q9UJ98 1225 aa18.88■□□□□ 0.61
CHRNA7-201ENST00000306901 GOLGA6L22H0YM25 854 aa18.88■□□□□ 0.61
CHRNA7-201ENST00000306901 CSRNP3Q8WYN3 585 aa18.88■□□□□ 0.61
CHRNA7-201ENST00000306901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
CHRNA7-201ENST00000306901 PLCB2Q00722 1185 aa18.86■□□□□ 0.61
CHRNA7-201ENST00000306901 ERICH6BQ5W0A0 696 aa18.86■□□□□ 0.61
CHRNA7-201ENST00000306901 TULP1O00294 542 aaPredicted RBP18.85■□□□□ 0.61
CHRNA7-201ENST00000306901 PLEKHG5O94827 1062 aa18.84■□□□□ 0.61
CHRNA7-201ENST00000306901 NOP58Q9Y2X3 529 aaKnown RBP18.83■□□□□ 0.6
CHRNA7-201ENST00000306901 TAOK2Q9UL54 1235 aa18.83■□□□□ 0.6
CHRNA7-201ENST00000306901 ZBTB7CA1YPR0 619 aa18.8■□□□□ 0.6
CHRNA7-201ENST00000306901 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.8■□□□□ 0.6
CHRNA7-201ENST00000306901 DEKP35659 375 aaKnown RBP18.79■□□□□ 0.6
CHRNA7-201ENST00000306901 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
CHRNA7-201ENST00000306901 ARID3AQ99856 593 aa18.77■□□□□ 0.6
CHRNA7-201ENST00000306901 A0A0G2JS52 829 aa18.77■□□□□ 0.6
CHRNA7-201ENST00000306901 RGS3P49796 1198 aa18.75■□□□□ 0.59
CHRNA7-201ENST00000306901 ZRSR1Q15695 479 aaKnown RBP18.74■□□□□ 0.59
CHRNA7-201ENST00000306901 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
CHRNA7-201ENST00000306901 ESF1Q9H501 851 aaKnown RBP18.72■□□□□ 0.59
CHRNA7-201ENST00000306901 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
CHRNA7-201ENST00000306901 B4GALNT3Q6L9W6 998 aa18.68■□□□□ 0.58
CHRNA7-201ENST00000306901 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
CHRNA7-201ENST00000306901 HSP90AB1P08238 724 aaKnown RBP18.64■□□□□ 0.57
CHRNA7-201ENST00000306901 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
CHRNA7-201ENST00000306901 CASC1Q6TDU7 716 aa18.62■□□□□ 0.57
CHRNA7-201ENST00000306901 FTSJ3Q8IY81 847 aaKnown RBP18.62■□□□□ 0.57
CHRNA7-201ENST00000306901 PPP4R2Q9NY27 417 aa18.61■□□□□ 0.57
CHRNA7-201ENST00000306901 C14orf37Q86TY3 774 aa18.58■□□□□ 0.57
CHRNA7-201ENST00000306901 FRAT1Q92837 279 aaPredicted RBP18.58■□□□□ 0.56
CHRNA7-201ENST00000306901 RRP7BPQ9NSQ0 103 aa18.58■□□□□ 0.56
CHRNA7-201ENST00000306901 MSNP26038 577 aaKnown RBP18.57■□□□□ 0.56
CHRNA7-201ENST00000306901 RBM19Q9Y4C8 960 aaKnown RBP18.54■□□□□ 0.56
CHRNA7-201ENST00000306901 ABCC9O60706 1549 aa18.54■□□□□ 0.56
CHRNA7-201ENST00000306901 NAP1L2Q9ULW6 460 aaPredicted RBP18.51■□□□□ 0.55
CHRNA7-201ENST00000306901 GOLGA6L6A8MZA4 724 aa18.5■□□□□ 0.55
CHRNA7-201ENST00000306901 RGL3Q3MIN7 710 aa18.5■□□□□ 0.55
CHRNA7-201ENST00000306901 CHAF1AQ13111 956 aaPredicted RBP18.49■□□□□ 0.55
CHRNA7-201ENST00000306901 DRC7Q8IY82 874 aa18.49■□□□□ 0.55
CHRNA7-201ENST00000306901 GZF1Q9H116 711 aaPredicted RBP18.49■□□□□ 0.55
CHRNA7-201ENST00000306901 L1TD1Q5T7N2 865 aaKnown RBP18.47■□□□□ 0.55
CHRNA7-201ENST00000306901 HSCBQ8IWL3 235 aa18.45■□□□□ 0.54
CHRNA7-201ENST00000306901 CC2D1BQ5T0F9 858 aaKnown RBP18.44■□□□□ 0.54
CHRNA7-201ENST00000306901 NCBP3Q53F19 620 aaKnown RBP18.43■□□□□ 0.54
CHRNA7-201ENST00000306901 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
CHRNA7-201ENST00000306901 FGD1P98174 961 aa18.41■□□□□ 0.54
CHRNA7-201ENST00000306901 TSPY4P0CV99 314 aa18.4■□□□□ 0.54
CHRNA7-201ENST00000306901 TSPY10P0CW01 314 aa18.4■□□□□ 0.54
CHRNA7-201ENST00000306901 CFAP53Q96M91 514 aa18.39■□□□□ 0.53
CHRNA7-201ENST00000306901 MTUS2Q5JR59 1369 aa18.38■□□□□ 0.53
CHRNA7-201ENST00000306901 GOLGA6L4A6NEF3 574 aa18.38■□□□□ 0.53
CHRNA7-201ENST00000306901 KCNJ4P48050 445 aa18.38■□□□□ 0.53
CHRNA7-201ENST00000306901 MYO15BQ96JP2 1530 aa18.38■□□□□ 0.53
CHRNA7-201ENST00000306901 OS9Q13438 667 aaPredicted RBP18.37■□□□□ 0.53
CHRNA7-201ENST00000306901 SIN3AQ96ST3 1273 aa18.37■□□□□ 0.53
CHRNA7-201ENST00000306901 NRDCO43847 1150 aa18.34■□□□□ 0.53
CHRNA7-201ENST00000306901 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
CHRNA7-201ENST00000306901 SLKQ9H2G2 1235 aaPredicted RBP18.34■□□□□ 0.53
CHRNA7-201ENST00000306901 MAPK8IP3Q9UPT6 1336 aa18.34■□□□□ 0.53
CHRNA7-201ENST00000306901 TNNT3P45378 269 aaPredicted RBP18.33■□□□□ 0.52
CHRNA7-201ENST00000306901 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
CHRNA7-201ENST00000306901 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
CHRNA7-201ENST00000306901 CLSTN1O94985 981 aa18.3■□□□□ 0.52
CHRNA7-201ENST00000306901 APBB1O00213 710 aa18.28■□□□□ 0.52
CHRNA7-201ENST00000306901 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
CHRNA7-201ENST00000306901 NPM1P06748 294 aaKnown RBP eCLIP18.26■□□□□ 0.51
CHRNA7-201ENST00000306901 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
CHRNA7-201ENST00000306901 CLIP1P30622 1438 aa18.25■□□□□ 0.51
CHRNA7-201ENST00000306901 FOXD4L1Q9NU39 408 aa18.22■□□□□ 0.51
CHRNA7-201ENST00000306901 KIAA2012Q0VF49 1180 aa18.22■□□□□ 0.51
CHRNA7-201ENST00000306901 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
CHRNA7-201ENST00000306901 KCNH8Q96L42 1107 aa18.2■□□□□ 0.5
CHRNA7-201ENST00000306901 GOLGA6L3A6NEY3 463 aa18.2■□□□□ 0.5
CHRNA7-201ENST00000306901 HAP1P54257 671 aaPredicted RBP18.19■□□□□ 0.5
CHRNA7-201ENST00000306901 MCCP23508 829 aa18.18■□□□□ 0.5
CHRNA7-201ENST00000306901 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
CHRNA7-201ENST00000306901 PDE4CQ08493 712 aa18.18■□□□□ 0.5
CHRNA7-201ENST00000306901 NUDCQ9Y266 331 aa18.18■□□□□ 0.5
CHRNA7-201ENST00000306901 NOC3LQ8WTT2 800 aaKnown RBP18.17■□□□□ 0.5
CHRNA7-201ENST00000306901 GBP4Q96PP9 640 aa18.17■□□□□ 0.5
CHRNA7-201ENST00000306901 LMOD2Q6P5Q4 547 aa18.15■□□□□ 0.5
CHRNA7-201ENST00000306901 GNL2Q13823 731 aaKnown RBP18.15■□□□□ 0.5
CHRNA7-201ENST00000306901 HSP90AA2PQ14568 343 aaPredicted RBP18.15■□□□□ 0.5
CHRNA7-201ENST00000306901 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
CHRNA7-201ENST00000306901 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
CHRNA7-201ENST00000306901 NPHP1O15259 732 aa18.15■□□□□ 0.5
CHRNA7-201ENST00000306901 MFAP1P55081 439 aaKnown RBP18.13■□□□□ 0.49
CHRNA7-201ENST00000306901 SOX12O15370 315 aa18.13■□□□□ 0.49
CHRNA7-201ENST00000306901 SCRIBQ14160 1630 aa18.13■□□□□ 0.49
CHRNA7-201ENST00000306901 CEP162Q5TB80 1403 aa18.12■□□□□ 0.49
CHRNA7-201ENST00000306901 GOLGA2Q08379 1002 aa18.12■□□□□ 0.49
CHRNA7-201ENST00000306901 MS4A1P11836 297 aa18.12■□□□□ 0.49
CHRNA7-201ENST00000306901 NOL8Q76FK4 1167 aaKnown RBP18.11■□□□□ 0.49
CHRNA7-201ENST00000306901 ISY1Q9ULR0 285 aaKnown RBP18.11■□□□□ 0.49
CHRNA7-201ENST00000306901 FOXD4L5Q5VV16 416 aaPredicted RBP18.1■□□□□ 0.49
CHRNA7-201ENST00000306901 FOXD4L4Q8WXT5 416 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms