RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 TPRNQ4KMQ1 711 aa18.94■□□□□ 0.62
SPRED1-201ENST00000299084 SENP3Q9H4L4 574 aaPredicted RBP18.93■□□□□ 0.62
SPRED1-201ENST00000299084 PTMAP06454 111 aaKnown RBP18.91■□□□□ 0.62
SPRED1-201ENST00000299084 FKBP8Q14318 412 aa18.91■□□□□ 0.62
SPRED1-201ENST00000299084 LMOD2Q6P5Q4 547 aa18.9■□□□□ 0.62
SPRED1-201ENST00000299084 ISY1Q9ULR0 285 aaKnown RBP18.9■□□□□ 0.62
SPRED1-201ENST00000299084 TMC1Q8TDI8 760 aa18.9■□□□□ 0.62
SPRED1-201ENST00000299084 GOLGA6L22H0YM25 854 aa18.89■□□□□ 0.61
SPRED1-201ENST00000299084 GOLGA6L6A8MZA4 724 aa18.86■□□□□ 0.61
SPRED1-201ENST00000299084 FAM9BQ8IZU0 186 aa18.84■□□□□ 0.61
SPRED1-201ENST00000299084 TONSLQ96HA7 1378 aa18.83■□□□□ 0.61
SPRED1-201ENST00000299084 TMX4Q9H1E5 349 aaPredicted RBP18.83■□□□□ 0.6
SPRED1-201ENST00000299084 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
SPRED1-201ENST00000299084 FGD1P98174 961 aa18.81■□□□□ 0.6
SPRED1-201ENST00000299084 BECN1Q14457 450 aa18.8■□□□□ 0.6
SPRED1-201ENST00000299084 NAP1L2Q9ULW6 460 aaPredicted RBP18.79■□□□□ 0.6
SPRED1-201ENST00000299084 CCDC136Q96JN2 1154 aa18.79■□□□□ 0.6
SPRED1-201ENST00000299084 ANP32EQ9BTT0 268 aa18.76■□□□□ 0.59
SPRED1-201ENST00000299084 KDM2AQ9Y2K7 1162 aa18.76■□□□□ 0.59
SPRED1-201ENST00000299084 HNRNPUQ00839 825 aaKnown RBP eCLIP18.75■□□□□ 0.59
SPRED1-201ENST00000299084 OS9Q13438 667 aaPredicted RBP18.74■□□□□ 0.59
SPRED1-201ENST00000299084 PPM1GO15355 546 aaPredicted RBP18.74■□□□□ 0.59
SPRED1-201ENST00000299084 L1TD1Q5T7N2 865 aaKnown RBP18.74■□□□□ 0.59
SPRED1-201ENST00000299084 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
SPRED1-201ENST00000299084 NRDCO43847 1150 aa18.73■□□□□ 0.59
SPRED1-201ENST00000299084 KIAA2012Q0VF49 1180 aa18.72■□□□□ 0.59
SPRED1-201ENST00000299084 TSPY4P0CV99 314 aa18.72■□□□□ 0.59
SPRED1-201ENST00000299084 TSPY10P0CW01 314 aa18.72■□□□□ 0.59
SPRED1-201ENST00000299084 PLCB2Q00722 1185 aa18.71■□□□□ 0.59
SPRED1-201ENST00000299084 KCNJ4P48050 445 aa18.69■□□□□ 0.58
SPRED1-201ENST00000299084 CFAP53Q96M91 514 aa18.67■□□□□ 0.58
SPRED1-201ENST00000299084 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
SPRED1-201ENST00000299084 TRHP20396 242 aaPredicted RBP18.66■□□□□ 0.58
SPRED1-201ENST00000299084 NOC3LQ8WTT2 800 aaKnown RBP18.66■□□□□ 0.58
SPRED1-201ENST00000299084 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
SPRED1-201ENST00000299084 LAS1LQ9Y4W2 734 aaKnown RBP18.65■□□□□ 0.58
SPRED1-201ENST00000299084 CHAF1AQ13111 956 aaPredicted RBP18.63■□□□□ 0.57
SPRED1-201ENST00000299084 PNNQ9H307 717 aaKnown RBP18.62■□□□□ 0.57
SPRED1-201ENST00000299084 DDRGK1Q96HY6 314 aa18.61■□□□□ 0.57
SPRED1-201ENST00000299084 G3V3G9 751 aa18.59■□□□□ 0.57
SPRED1-201ENST00000299084 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
SPRED1-201ENST00000299084 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.57
SPRED1-201ENST00000299084 RTN4Q9NQC3 1192 aaKnown RBP18.57■□□□□ 0.56
SPRED1-201ENST00000299084 CHMP7Q8WUX9 453 aaPredicted RBP18.57■□□□□ 0.56
SPRED1-201ENST00000299084 CHIC2Q9UKJ5 165 aa18.55■□□□□ 0.56
SPRED1-201ENST00000299084 GOLGA6L4A6NEF3 574 aa18.55■□□□□ 0.56
SPRED1-201ENST00000299084 KCNH8Q96L42 1107 aa18.54■□□□□ 0.56
SPRED1-201ENST00000299084 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
SPRED1-201ENST00000299084 IRX6P78412 446 aaPredicted RBP18.51■□□□□ 0.55
SPRED1-201ENST00000299084 POGKQ9P215 609 aa18.5■□□□□ 0.55
SPRED1-201ENST00000299084 ERICH6BQ5W0A0 696 aa18.5■□□□□ 0.55
SPRED1-201ENST00000299084 SCRIBQ14160 1630 aa18.5■□□□□ 0.55
SPRED1-201ENST00000299084 CNKSR2Q8WXI2 1034 aa18.49■□□□□ 0.55
SPRED1-201ENST00000299084 CCDC9Q9Y3X0 531 aaKnown RBP18.48■□□□□ 0.55
SPRED1-201ENST00000299084 CHMP4BQ9H444 224 aaKnown RBP18.47■□□□□ 0.55
SPRED1-201ENST00000299084 DCAF8L1A6NGE4 600 aa18.47■□□□□ 0.55
SPRED1-201ENST00000299084 MRS2Q9HD23 443 aa18.47■□□□□ 0.55
SPRED1-201ENST00000299084 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
SPRED1-201ENST00000299084 PDE4CQ08493 712 aa18.45■□□□□ 0.54
SPRED1-201ENST00000299084 CDCA8Q53HL2 280 aa18.45■□□□□ 0.54
SPRED1-201ENST00000299084 DRC7Q8IY82 874 aa18.45■□□□□ 0.54
SPRED1-201ENST00000299084 DDX10Q13206 875 aaKnown RBP18.45■□□□□ 0.54
SPRED1-201ENST00000299084 NUDCQ9Y266 331 aa18.45■□□□□ 0.54
SPRED1-201ENST00000299084 HSP90AB1P08238 724 aaKnown RBP18.42■□□□□ 0.54
SPRED1-201ENST00000299084 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
SPRED1-201ENST00000299084 CEP89Q96ST8 783 aa18.4■□□□□ 0.54
SPRED1-201ENST00000299084 HDGFP51858 240 aaKnown RBP18.4■□□□□ 0.54
SPRED1-201ENST00000299084 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.39■□□□□ 0.53
SPRED1-201ENST00000299084 TNNT3P45378 269 aaPredicted RBP18.39■□□□□ 0.53
SPRED1-201ENST00000299084 MCCP23508 829 aa18.38■□□□□ 0.53
SPRED1-201ENST00000299084 ZNF330Q9Y3S2 320 aaPredicted RBP18.36■□□□□ 0.53
SPRED1-201ENST00000299084 VPS53Q5VIR6 699 aa18.35■□□□□ 0.53
SPRED1-201ENST00000299084 RGL3Q3MIN7 710 aa18.33■□□□□ 0.53
SPRED1-201ENST00000299084 ARID3AQ99856 593 aa18.33■□□□□ 0.52
SPRED1-201ENST00000299084 FBXO3Q9UK99 471 aa18.33■□□□□ 0.52
SPRED1-201ENST00000299084 NEUROD2Q15784 382 aa18.32■□□□□ 0.52
SPRED1-201ENST00000299084 SOX12O15370 315 aa18.32■□□□□ 0.52
SPRED1-201ENST00000299084 MTUS2Q5JR59 1369 aa18.31■□□□□ 0.52
SPRED1-201ENST00000299084 MSNP26038 577 aaKnown RBP18.31■□□□□ 0.52
SPRED1-201ENST00000299084 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
SPRED1-201ENST00000299084 CCDC180Q9P1Z9 1646 aa18.31■□□□□ 0.52
SPRED1-201ENST00000299084 CSB-PGBD3P0DP91 1061 aa18.31■□□□□ 0.52
SPRED1-201ENST00000299084 RTF1Q92541 710 aaKnown RBP18.3■□□□□ 0.52
SPRED1-201ENST00000299084 MS4A1P11836 297 aa18.29■□□□□ 0.52
SPRED1-201ENST00000299084 U2SURPO15042 1029 aaKnown RBP18.28■□□□□ 0.52
SPRED1-201ENST00000299084 ANO8Q9HCE9 1232 aaPredicted RBP18.28■□□□□ 0.52
SPRED1-201ENST00000299084 TAF7LQ5H9L4 462 aa18.27■□□□□ 0.52
SPRED1-201ENST00000299084 CCDC34Q96HJ3 373 aa18.26■□□□□ 0.51
SPRED1-201ENST00000299084 CWC22Q9HCG8 908 aaKnown RBP18.26■□□□□ 0.51
SPRED1-201ENST00000299084 KIAA1211Q6ZU35 1233 aa18.26■□□□□ 0.51
SPRED1-201ENST00000299084 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
SPRED1-201ENST00000299084 GORABQ5T7V8 394 aa18.26■□□□□ 0.51
SPRED1-201ENST00000299084 RASSF8Q8NHQ8 419 aa18.26■□□□□ 0.51
SPRED1-201ENST00000299084 CALRP27797 417 aaKnown RBP18.26■□□□□ 0.51
SPRED1-201ENST00000299084 PLEKHD1A6NEE1 506 aa18.25■□□□□ 0.51
SPRED1-201ENST00000299084 PAK3O75914 559 aaPredicted RBP18.25■□□□□ 0.51
SPRED1-201ENST00000299084 MARCH6O60337 910 aa18.24■□□□□ 0.51
SPRED1-201ENST00000299084 MLECQ14165 292 aa18.23■□□□□ 0.51
SPRED1-201ENST00000299084 TPM4P67936 248 aa18.23■□□□□ 0.51
SPRED1-201ENST00000299084 FRAT1Q92837 279 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms