RNA–Protein interactions for RNA: ENST00000288447.8

DMD-201, Transcript of dystrophin, humanhuman

TSL 1 (best) BASIC

Gene DMD, Length 3,856 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-201ENST00000288447 DMRT2Q9Y5R5 561 aa4.89□□□□□ -1.63
DMD-201ENST00000288447 CANXP27824 592 aaKnown RBP4.88□□□□□ -1.63
DMD-201ENST00000288447 ZBTB7CA1YPR0 619 aa4.88□□□□□ -1.63
DMD-201ENST00000288447 SUPT5HO00267 1087 aaKnown RBP4.88□□□□□ -1.63
DMD-201ENST00000288447 NECTIN2Q92692 538 aa4.87□□□□□ -1.63
DMD-201ENST00000288447 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.86□□□□□ -1.63
DMD-201ENST00000288447 CLSTN1O94985 981 aa4.85□□□□□ -1.63
DMD-201ENST00000288447 CADPSQ9ULU8 1353 aa4.85□□□□□ -1.63
DMD-201ENST00000288447 PKD2Q13563 968 aa4.85□□□□□ -1.63
DMD-201ENST00000288447 BRPF1P55201 1214 aaPredicted RBP4.84□□□□□ -1.63
DMD-201ENST00000288447 ERICH6BQ5W0A0 696 aa4.84□□□□□ -1.64
DMD-201ENST00000288447 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.84□□□□□ -1.64
DMD-201ENST00000288447 NBR1Q14596 966 aa4.83□□□□□ -1.64
DMD-201ENST00000288447 IGSF5Q9NSI5 407 aa4.83□□□□□ -1.64
DMD-201ENST00000288447 MYCNP04198 464 aaPredicted RBP4.82□□□□□ -1.64
DMD-201ENST00000288447 SETQ01105 290 aaPredicted RBP4.82□□□□□ -1.64
DMD-201ENST00000288447 AAMPQ13685 434 aa4.82□□□□□ -1.64
DMD-201ENST00000288447 CCDC125Q86Z20 511 aa4.82□□□□□ -1.64
DMD-201ENST00000288447 PROM2Q8N271 834 aa4.82□□□□□ -1.64
DMD-201ENST00000288447 SLC4A2P04920 1241 aa4.81□□□□□ -1.64
DMD-201ENST00000288447 HOXD11P31277 338 aaPredicted RBP4.81□□□□□ -1.64
DMD-201ENST00000288447 GRIPAP1Q4V328 841 aa4.81□□□□□ -1.64
DMD-201ENST00000288447 KCTD17Q8N5Z5 321 aa4.81□□□□□ -1.64
DMD-201ENST00000288447 ZNF692Q9BU19 519 aaPredicted RBP4.81□□□□□ -1.64
DMD-201ENST00000288447 MAFGO15525 162 aa4.81□□□□□ -1.64
DMD-201ENST00000288447 C1orf115Q9H7X2 142 aa4.79□□□□□ -1.64
DMD-201ENST00000288447 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.79□□□□□ -1.64
DMD-201ENST00000288447 AMOTL2Q9Y2J4 779 aa4.79□□□□□ -1.64
DMD-201ENST00000288447 DCAF1Q9Y4B6 1507 aa4.78□□□□□ -1.64
DMD-201ENST00000288447 DHX37Q8IY37 1157 aaKnown RBP4.78□□□□□ -1.64
DMD-201ENST00000288447 TSHZ2Q9NRE2 1034 aa4.77□□□□□ -1.65
DMD-201ENST00000288447 BCL11BQ9C0K0 894 aaPredicted RBP4.77□□□□□ -1.65
DMD-201ENST00000288447 VGFO15240 615 aaPredicted RBP4.76□□□□□ -1.65
DMD-201ENST00000288447 TEX2Q8IWB9 1127 aa4.75□□□□□ -1.65
DMD-201ENST00000288447 ZC3H4Q9UPT8 1303 aaKnown RBP4.75□□□□□ -1.65
DMD-201ENST00000288447 SPRYD3Q8NCJ5 442 aa4.74□□□□□ -1.65
DMD-201ENST00000288447 CENPBP07199 599 aaPredicted RBP4.73□□□□□ -1.65
DMD-201ENST00000288447 TRHP20396 242 aaPredicted RBP4.73□□□□□ -1.65
DMD-201ENST00000288447 PAXIP1Q6ZW49 1069 aaPredicted RBP4.73□□□□□ -1.65
DMD-201ENST00000288447 MCCP23508 829 aa4.72□□□□□ -1.65
DMD-201ENST00000288447 FAM177A1Q8N128 213 aaPredicted RBP4.72□□□□□ -1.65
DMD-201ENST00000288447 CERS3Q8IU89 383 aa4.71□□□□□ -1.66
DMD-201ENST00000288447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.71□□□□□ -1.66
DMD-201ENST00000288447 HNRNPUL2Q1KMD3 747 aaKnown RBP4.71□□□□□ -1.66
DMD-201ENST00000288447 ANP32EQ9BTT0 268 aa4.71□□□□□ -1.66
DMD-201ENST00000288447 PLEKHD1A6NEE1 506 aa4.7□□□□□ -1.66
DMD-201ENST00000288447 BARGINQ6ZT62 677 aa4.7□□□□□ -1.66
DMD-201ENST00000288447 MCCD1P59942 119 aaPredicted RBP4.69□□□□□ -1.66
DMD-201ENST00000288447 IGF1RP08069 1367 aa4.69□□□□□ -1.66
DMD-201ENST00000288447 MKL1Q969V6 931 aa4.69□□□□□ -1.66
DMD-201ENST00000288447 PRDM16Q9HAZ2 1276 aa4.69□□□□□ -1.66
DMD-201ENST00000288447 PSMD1Q99460 953 aa4.69□□□□□ -1.66
DMD-201ENST00000288447 CAPN15O75808 1086 aa4.68□□□□□ -1.66
DMD-201ENST00000288447 ATF5Q9Y2D1 282 aaPredicted RBP4.68□□□□□ -1.66
DMD-201ENST00000288447 A6NJR5 290 aa4.67□□□□□ -1.66
DMD-201ENST00000288447 PATL2C9JE40 543 aaKnown RBP4.66□□□□□ -1.66
DMD-201ENST00000288447 BRPF3Q9ULD4 1205 aa4.66□□□□□ -1.66
DMD-201ENST00000288447 NOP58Q9Y2X3 529 aaKnown RBP4.66□□□□□ -1.66
DMD-201ENST00000288447 MTMR7Q9Y216 660 aa4.66□□□□□ -1.66
DMD-201ENST00000288447 U3KPZ7 1027 aaPredicted RBP4.66□□□□□ -1.66
DMD-201ENST00000288447 MMP14P50281 582 aa4.65□□□□□ -1.66
DMD-201ENST00000288447 EXOC8Q8IYI6 725 aa4.65□□□□□ -1.66
DMD-201ENST00000288447 ZNF592Q92610 1267 aa4.65□□□□□ -1.66
DMD-201ENST00000288447 ZFP91Q96JP5 570 aaPredicted RBP4.65□□□□□ -1.66
DMD-201ENST00000288447 TMED8Q6PL24 325 aaPredicted RBP4.65□□□□□ -1.67
DMD-201ENST00000288447 IFNLR1Q8IU57 520 aaPredicted RBP4.65□□□□□ -1.67
DMD-201ENST00000288447 RTL5Q5HYW3 569 aaPredicted RBP4.64□□□□□ -1.67
DMD-201ENST00000288447 E9PSI1 815 aa4.64□□□□□ -1.67
DMD-201ENST00000288447 DNAJC2Q99543 621 aaKnown RBP4.64□□□□□ -1.67
DMD-201ENST00000288447 MYT1LQ9UL68 1186 aa4.64□□□□□ -1.67
DMD-201ENST00000288447 CCDC27Q2M243 656 aa4.63□□□□□ -1.67
DMD-201ENST00000288447 IPO4Q8TEX9 1081 aaKnown RBP4.63□□□□□ -1.67
DMD-201ENST00000288447 RAD21O60216 631 aa4.62□□□□□ -1.67
DMD-201ENST00000288447 NCLP19338 710 aaKnown RBP4.62□□□□□ -1.67
DMD-201ENST00000288447 ABCB7O75027 752 aa4.62□□□□□ -1.67
DMD-201ENST00000288447 ERCC3P19447 782 aa4.62□□□□□ -1.67
DMD-201ENST00000288447 VASPP50552 380 aaPredicted RBP4.62□□□□□ -1.67
DMD-201ENST00000288447 CACTIN-AS1Q8N1I8 211 aa4.62□□□□□ -1.67
DMD-201ENST00000288447 C8orf37Q96NL8 207 aa4.62□□□□□ -1.67
DMD-201ENST00000288447 RIPOR2Q9Y4F9 1068 aa4.62□□□□□ -1.67
DMD-201ENST00000288447 MFAP1P55081 439 aaKnown RBP4.61□□□□□ -1.67
DMD-201ENST00000288447 HSP90AB4PQ58FF6 505 aa4.61□□□□□ -1.67
DMD-201ENST00000288447 SPATA32Q96LK8 384 aa4.61□□□□□ -1.67
DMD-201ENST00000288447 ONECUT3O60422 494 aaPredicted RBP4.61□□□□□ -1.67
DMD-201ENST00000288447 CFAP44Q96MT7 982 aa4.61□□□□□ -1.67
DMD-201ENST00000288447 ANO8Q9HCE9 1232 aaPredicted RBP4.61□□□□□ -1.67
DMD-201ENST00000288447 NAP1L5Q96NT1 182 aaPredicted RBP4.6□□□□□ -1.67
DMD-201ENST00000288447 ZNF219Q9P2Y4 722 aaPredicted RBP4.6□□□□□ -1.67
DMD-201ENST00000288447 ARIH1Q9Y4X5 557 aaPredicted RBP4.6□□□□□ -1.67
DMD-201ENST00000288447 LOC102724159A0A0B4J2E5 919 aa4.6□□□□□ -1.67
DMD-201ENST00000288447 PWP2Q15269 919 aaKnown RBP4.6□□□□□ -1.67
DMD-201ENST00000288447 NEFMP07197 916 aa4.59□□□□□ -1.67
DMD-201ENST00000288447 NME8Q8N427 588 aa4.58□□□□□ -1.68
DMD-201ENST00000288447 PLCD4Q9BRC7 762 aa4.58□□□□□ -1.68
DMD-201ENST00000288447 CLSPNQ9HAW4 1339 aa4.58□□□□□ -1.68
DMD-201ENST00000288447 RBM10P98175 930 aaKnown RBP4.58□□□□□ -1.68
DMD-201ENST00000288447 POLA2Q14181 598 aa4.58□□□□□ -1.68
DMD-201ENST00000288447 TMCO4Q5TGY1 634 aa4.58□□□□□ -1.68
DMD-201ENST00000288447 SNRNP27Q8WVK2 155 aaKnown RBP4.58□□□□□ -1.68
DMD-201ENST00000288447 SPINK5Q9NQ38 1064 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms