RNA–Protein interactions for RNA: ENST00000272793.9

UBR3-201, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBR3, Length 8,005 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-201ENST00000272793 PLEKHG5O94827 1062 aa20.78■□□□□ 0.92
UBR3-201ENST00000272793 DDRGK1Q96HY6 314 aa20.77■□□□□ 0.92
UBR3-201ENST00000272793 ESF1Q9H501 851 aaKnown RBP20.76■□□□□ 0.91
UBR3-201ENST00000272793 ARID3AQ99856 593 aa20.76■□□□□ 0.91
UBR3-201ENST00000272793 NRDCO43847 1150 aa20.75■□□□□ 0.91
UBR3-201ENST00000272793 ZBTB7CA1YPR0 619 aa20.7■□□□□ 0.9
UBR3-201ENST00000272793 CASC1Q6TDU7 716 aa20.7■□□□□ 0.9
UBR3-201ENST00000272793 DRC7Q8IY82 874 aa20.7■□□□□ 0.9
UBR3-201ENST00000272793 FBXO3Q9UK99 471 aa20.7■□□□□ 0.9
UBR3-201ENST00000272793 A0A0U1RQG5 324 aaPredicted RBP20.69■□□□□ 0.9
UBR3-201ENST00000272793 KIAA2012Q0VF49 1180 aa20.69■□□□□ 0.9
UBR3-201ENST00000272793 L1TD1Q5T7N2 865 aaKnown RBP20.68■□□□□ 0.9
UBR3-201ENST00000272793 CHGAP10645 457 aaKnown RBP20.67■□□□□ 0.9
UBR3-201ENST00000272793 NAP1L2Q9ULW6 460 aaPredicted RBP20.67■□□□□ 0.9
UBR3-201ENST00000272793 PNNQ9H307 717 aaKnown RBP20.66■□□□□ 0.9
UBR3-201ENST00000272793 DDX10Q13206 875 aaKnown RBP20.66■□□□□ 0.9
UBR3-201ENST00000272793 PDE4CQ08493 712 aa20.65■□□□□ 0.9
UBR3-201ENST00000272793 MSNP26038 577 aaKnown RBP20.64■□□□□ 0.9
UBR3-201ENST00000272793 ARID3CA6NKF2 412 aa20.64■□□□□ 0.9
UBR3-201ENST00000272793 WDR43Q15061 677 aaKnown RBP eCLIP20.64■□□□□ 0.89
UBR3-201ENST00000272793 NPHP1O15259 732 aa20.63■□□□□ 0.89
UBR3-201ENST00000272793 TMC1Q8TDI8 760 aa20.61■□□□□ 0.89
UBR3-201ENST00000272793 FGD1P98174 961 aa20.57■□□□□ 0.88
UBR3-201ENST00000272793 C14orf37Q86TY3 774 aa20.53■□□□□ 0.88
UBR3-201ENST00000272793 LAS1LQ9Y4W2 734 aaKnown RBP20.53■□□□□ 0.88
UBR3-201ENST00000272793 GOLGA6L1Q8N7Z2 621 aa20.52■□□□□ 0.88
UBR3-201ENST00000272793 ANO8Q9HCE9 1232 aaPredicted RBP20.52■□□□□ 0.88
UBR3-201ENST00000272793 KRI1Q8N9T8 703 aaKnown RBP20.5■□□□□ 0.87
UBR3-201ENST00000272793 SENP3-EIF4A1A0A087X0R7 540 aa20.5■□□□□ 0.87
UBR3-201ENST00000272793 SETQ01105 290 aaPredicted RBP20.49■□□□□ 0.87
UBR3-201ENST00000272793 HSP90AB1P08238 724 aaKnown RBP20.49■□□□□ 0.87
UBR3-201ENST00000272793 FBLN2P98095 1184 aa20.49■□□□□ 0.87
UBR3-201ENST00000272793 PATL2C9JE40 543 aaKnown RBP20.48■□□□□ 0.87
UBR3-201ENST00000272793 GOLGA6L4A6NEF3 574 aa20.48■□□□□ 0.87
UBR3-201ENST00000272793 ZNF777Q9ULD5 760 aaPredicted RBP20.47■□□□□ 0.87
UBR3-201ENST00000272793 ISY1Q9ULR0 285 aaKnown RBP20.47■□□□□ 0.87
UBR3-201ENST00000272793 GOLGA2Q08379 1002 aa20.47■□□□□ 0.87
UBR3-201ENST00000272793 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
UBR3-201ENST00000272793 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.43■□□□□ 0.86
UBR3-201ENST00000272793 KCNJ4P48050 445 aa20.43■□□□□ 0.86
UBR3-201ENST00000272793 TONSLQ96HA7 1378 aa20.38■□□□□ 0.85
UBR3-201ENST00000272793 MRS2Q9HD23 443 aa20.38■□□□□ 0.85
UBR3-201ENST00000272793 HAP1P54257 671 aaPredicted RBP20.37■□□□□ 0.85
UBR3-201ENST00000272793 HIRIP3Q9BW71 556 aaPredicted RBP20.36■□□□□ 0.85
UBR3-201ENST00000272793 FTSJ3Q8IY81 847 aaKnown RBP20.36■□□□□ 0.85
UBR3-201ENST00000272793 GNL2Q13823 731 aaKnown RBP20.36■□□□□ 0.85
UBR3-201ENST00000272793 PTMSP20962 102 aa20.35■□□□□ 0.85
UBR3-201ENST00000272793 SENP3Q9H4L4 574 aaPredicted RBP20.35■□□□□ 0.85
UBR3-201ENST00000272793 TAF7LQ5H9L4 462 aa20.33■□□□□ 0.85
UBR3-201ENST00000272793 OS9Q13438 667 aaPredicted RBP20.3■□□□□ 0.84
UBR3-201ENST00000272793 MIER1Q8N108 512 aa20.3■□□□□ 0.84
UBR3-201ENST00000272793 PPM1GO15355 546 aaPredicted RBP20.29■□□□□ 0.84
UBR3-201ENST00000272793 APPP05067 770 aa20.27■□□□□ 0.84
UBR3-201ENST00000272793 RRP12Q5JTH9 1297 aaKnown RBP20.25■□□□□ 0.83
UBR3-201ENST00000272793 SPRYD3Q8NCJ5 442 aa20.24■□□□□ 0.83
UBR3-201ENST00000272793 USP35Q9P2H5 1018 aa20.24■□□□□ 0.83
UBR3-201ENST00000272793 KDM2AQ9Y2K7 1162 aa20.23■□□□□ 0.83
UBR3-201ENST00000272793 CEP89Q96ST8 783 aa20.22■□□□□ 0.83
UBR3-201ENST00000272793 DEKP35659 375 aaKnown RBP20.21■□□□□ 0.83
UBR3-201ENST00000272793 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
UBR3-201ENST00000272793 CREBRFQ8IUR6 639 aa20.2■□□□□ 0.82
UBR3-201ENST00000272793 SUPT16HQ9Y5B9 1047 aaKnown RBP20.17■□□□□ 0.82
UBR3-201ENST00000272793 WWC1Q8IX03 1113 aa20.17■□□□□ 0.82
UBR3-201ENST00000272793 RGS3P49796 1198 aa20.16■□□□□ 0.82
UBR3-201ENST00000272793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.16■□□□□ 0.823e-6■■■□□ 15.2
UBR3-201ENST00000272793 HSCBQ8IWL3 235 aa20.14■□□□□ 0.81
UBR3-201ENST00000272793 TPM4P67936 248 aa20.1■□□□□ 0.81
UBR3-201ENST00000272793 GZF1Q9H116 711 aaPredicted RBP20.06■□□□□ 0.8
UBR3-201ENST00000272793 MCCP23508 829 aa20.06■□□□□ 0.8
UBR3-201ENST00000272793 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
UBR3-201ENST00000272793 CNKSR2Q8WXI2 1034 aa20.02■□□□□ 0.79
UBR3-201ENST00000272793 HSP90B1P14625 803 aaKnown RBP20■□□□□ 0.79
UBR3-201ENST00000272793 KAT6BQ8WYB5 2073 aa20■□□□□ 0.79
UBR3-201ENST00000272793 ZNF771Q7L3S4 317 aaPredicted RBP19.99■□□□□ 0.79
UBR3-201ENST00000272793 CCAR2Q8N163 923 aaKnown RBP19.99■□□□□ 0.79
UBR3-201ENST00000272793 NEUROD2Q15784 382 aa19.99■□□□□ 0.79
UBR3-201ENST00000272793 PES1O00541 588 aaKnown RBP19.98■□□□□ 0.79
UBR3-201ENST00000272793 TPM3P06753 285 aa19.98■□□□□ 0.79
UBR3-201ENST00000272793 B4GALNT3Q6L9W6 998 aa19.97■□□□□ 0.79
UBR3-201ENST00000272793 HSP90AA2PQ14568 343 aaPredicted RBP19.97■□□□□ 0.79
UBR3-201ENST00000272793 FRAT1Q92837 279 aaPredicted RBP19.96■□□□□ 0.79
UBR3-201ENST00000272793 MAP7D2Q96T17 732 aa19.96■□□□□ 0.79
UBR3-201ENST00000272793 RASSF8Q8NHQ8 419 aa19.96■□□□□ 0.79
UBR3-201ENST00000272793 MEX3CQ5U5Q3 659 aaKnown RBP19.95■□□□□ 0.78
UBR3-201ENST00000272793 LMOD2Q6P5Q4 547 aa19.95■□□□□ 0.78
UBR3-201ENST00000272793 VPS53Q5VIR6 699 aa19.94■□□□□ 0.78
UBR3-201ENST00000272793 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
UBR3-201ENST00000272793 STK11IPQ8N1F8 1099 aa19.91■□□□□ 0.78
UBR3-201ENST00000272793 SYAP1Q96A49 352 aaPredicted RBP19.9■□□□□ 0.78
UBR3-201ENST00000272793 PPP1R15AO75807 674 aaPredicted RBP19.89■□□□□ 0.77
UBR3-201ENST00000272793 CFAP53Q96M91 514 aa19.89■□□□□ 0.77
UBR3-201ENST00000272793 HTATSF1O43719 755 aaKnown RBP19.88■□□□□ 0.77
UBR3-201ENST00000272793 TSR1Q2NL82 804 aaKnown RBP19.88■□□□□ 0.77
UBR3-201ENST00000272793 CCDC70Q6NSX1 233 aa19.88■□□□□ 0.77
UBR3-201ENST00000272793 CCDC34Q96HJ3 373 aa19.87■□□□□ 0.77
UBR3-201ENST00000272793 GPS2Q13227 327 aa19.86■□□□□ 0.77
UBR3-201ENST00000272793 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.86■□□□□ 0.77
UBR3-201ENST00000272793 PLCD4Q9BRC7 762 aa19.86■□□□□ 0.77
UBR3-201ENST00000272793 TPD52L1Q16890 204 aaPredicted RBP19.85■□□□□ 0.77
UBR3-201ENST00000272793 GBP4Q96PP9 640 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms