RNA–Protein interactions for RNA: ENST00000269122.7

CLTC-201, Transcript of clathrin heavy chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTC, Length 7,760 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-201ENST00000269122 NOP58Q9Y2X3 529 aaKnown RBP10.62□□□□□ -0.71
CLTC-201ENST00000269122 PTMAP06454 111 aaKnown RBP10.62□□□□□ -0.71
CLTC-201ENST00000269122 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
CLTC-201ENST00000269122 CHGAP10645 457 aaKnown RBP10.61□□□□□ -0.71
CLTC-201ENST00000269122 SPRYD3Q8NCJ5 442 aa10.6□□□□□ -0.71
CLTC-201ENST00000269122 TONSLQ96HA7 1378 aa10.59□□□□□ -0.71
CLTC-201ENST00000269122 A0A0G2JS52 829 aa10.59□□□□□ -0.71
CLTC-201ENST00000269122 B4GALNT3Q6L9W6 998 aa10.59□□□□□ -0.71
CLTC-201ENST00000269122 PLCB2Q00722 1185 aa10.59□□□□□ -0.71
CLTC-201ENST00000269122 TAOK2Q9UL54 1235 aa10.58□□□□□ -0.72
CLTC-201ENST00000269122 DDRGK1Q96HY6 314 aa10.57□□□□□ -0.72
CLTC-201ENST00000269122 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.57□□□□□ -0.72
CLTC-201ENST00000269122 ERICH6BQ5W0A0 696 aa10.56□□□□□ -0.72
CLTC-201ENST00000269122 RBM19Q9Y4C8 960 aaKnown RBP10.55□□□□□ -0.72
CLTC-201ENST00000269122 BECN1Q14457 450 aa10.54□□□□□ -0.72
CLTC-201ENST00000269122 KDM2AQ9Y2K7 1162 aa10.54□□□□□ -0.72
CLTC-201ENST00000269122 TULP1O00294 542 aaPredicted RBP10.53□□□□□ -0.72
CLTC-201ENST00000269122 MYO15BQ96JP2 1530 aa10.53□□□□□ -0.72
CLTC-201ENST00000269122 RGS3P49796 1198 aa10.53□□□□□ -0.72
CLTC-201ENST00000269122 CHIC2Q9UKJ5 165 aa10.52□□□□□ -0.73
CLTC-201ENST00000269122 WDR43Q15061 677 aaKnown RBP eCLIP10.51□□□□□ -0.731e-5■■□□□ 14.2
CLTC-201ENST00000269122 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
CLTC-201ENST00000269122 DCAF1Q9Y4B6 1507 aa10.5□□□□□ -0.73
CLTC-201ENST00000269122 GZF1Q9H116 711 aaPredicted RBP10.49□□□□□ -0.73
CLTC-201ENST00000269122 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.48□□□□□ -0.734e-7■■□□□ 13.9
CLTC-201ENST00000269122 TIMELESSQ9UNS1 1208 aa10.47□□□□□ -0.73
CLTC-201ENST00000269122 PPM1GO15355 546 aaPredicted RBP10.46□□□□□ -0.74
CLTC-201ENST00000269122 GOLGA6L22H0YM25 854 aa10.46□□□□□ -0.74
CLTC-201ENST00000269122 ESF1Q9H501 851 aaKnown RBP10.45□□□□□ -0.74
CLTC-201ENST00000269122 MSNP26038 577 aaKnown RBP10.41□□□□□ -0.74
CLTC-201ENST00000269122 TSHZ2Q9NRE2 1034 aa10.41□□□□□ -0.74
CLTC-201ENST00000269122 MYH16Q9H6N6 1097 aa10.41□□□□□ -0.74
CLTC-201ENST00000269122 HSP90AB1P08238 724 aaKnown RBP10.4□□□□□ -0.74
CLTC-201ENST00000269122 NEUROD2Q15784 382 aa10.4□□□□□ -0.74
CLTC-201ENST00000269122 VSIG10Q8N0Z9 540 aa10.4□□□□□ -0.74
CLTC-201ENST00000269122 PPP4R2Q9NY27 417 aa10.4□□□□□ -0.74
CLTC-201ENST00000269122 CCDC180Q9P1Z9 1646 aa10.38□□□□□ -0.75
CLTC-201ENST00000269122 C14orf37Q86TY3 774 aa10.37□□□□□ -0.75
CLTC-201ENST00000269122 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
CLTC-201ENST00000269122 ZRSR1Q15695 479 aaKnown RBP10.36□□□□□ -0.75
CLTC-201ENST00000269122 SLKQ9H2G2 1235 aaPredicted RBP10.35□□□□□ -0.75
CLTC-201ENST00000269122 DRC7Q8IY82 874 aa10.34□□□□□ -0.75
CLTC-201ENST00000269122 FTSJ3Q8IY81 847 aaKnown RBP10.34□□□□□ -0.75
CLTC-201ENST00000269122 A0A0U1RQG5 324 aaPredicted RBP10.33□□□□□ -0.76
CLTC-201ENST00000269122 RRP7BPQ9NSQ0 103 aa10.32□□□□□ -0.76
CLTC-201ENST00000269122 EIF4G2P78344 907 aaKnown RBP eCLIP10.31□□□□□ -0.76
CLTC-201ENST00000269122 HSP90AA2PQ14568 343 aaPredicted RBP10.31□□□□□ -0.76
CLTC-201ENST00000269122 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
CLTC-201ENST00000269122 TNNT3P45378 269 aaPredicted RBP10.31□□□□□ -0.76
CLTC-201ENST00000269122 NAP1L2Q9ULW6 460 aaPredicted RBP10.31□□□□□ -0.76
CLTC-201ENST00000269122 CHAF1AQ13111 956 aaPredicted RBP10.31□□□□□ -0.76
CLTC-201ENST00000269122 L1TD1Q5T7N2 865 aaKnown RBP10.3□□□□□ -0.76
CLTC-201ENST00000269122 NCBP3Q53F19 620 aaKnown RBP10.3□□□□□ -0.76
CLTC-201ENST00000269122 CC2D1BQ5T0F9 858 aaKnown RBP10.3□□□□□ -0.76
CLTC-201ENST00000269122 SIN3AQ96ST3 1273 aa10.3□□□□□ -0.76
CLTC-201ENST00000269122 FOXD4L1Q9NU39 408 aa10.28□□□□□ -0.76
CLTC-201ENST00000269122 ANO8Q9HCE9 1232 aaPredicted RBP10.28□□□□□ -0.76
CLTC-201ENST00000269122 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
CLTC-201ENST00000269122 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
CLTC-201ENST00000269122 CASC1Q6TDU7 716 aa10.27□□□□□ -0.77
CLTC-201ENST00000269122 HSCBQ8IWL3 235 aa10.27□□□□□ -0.77
CLTC-201ENST00000269122 BCL11BQ9C0K0 894 aaPredicted RBP10.24□□□□□ -0.77
CLTC-201ENST00000269122 KCNH8Q96L42 1107 aa10.23□□□□□ -0.77
CLTC-201ENST00000269122 APBB1O00213 710 aa10.23□□□□□ -0.77
CLTC-201ENST00000269122 NPM1P06748 294 aaKnown RBP eCLIP10.23□□□□□ -0.77
CLTC-201ENST00000269122 SCRIBQ14160 1630 aa10.22□□□□□ -0.77
CLTC-201ENST00000269122 FOXD4L5Q5VV16 416 aaPredicted RBP10.21□□□□□ -0.77
CLTC-201ENST00000269122 FOXD4L4Q8WXT5 416 aaPredicted RBP10.21□□□□□ -0.77
CLTC-201ENST00000269122 GOLGA6L6A8MZA4 724 aa10.2□□□□□ -0.78
CLTC-201ENST00000269122 GOLGA6L3A6NEY3 463 aa10.2□□□□□ -0.78
CLTC-201ENST00000269122 IPO9Q96P70 1041 aaKnown RBP10.2□□□□□ -0.78
CLTC-201ENST00000269122 FGD1P98174 961 aa10.19□□□□□ -0.78
CLTC-201ENST00000269122 BAZ1BQ9UIG0 1483 aaKnown RBP10.19□□□□□ -0.78
CLTC-201ENST00000269122 GOLGA6L4A6NEF3 574 aa10.19□□□□□ -0.78
CLTC-201ENST00000269122 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
CLTC-201ENST00000269122 PDE4CQ08493 712 aa10.18□□□□□ -0.78
CLTC-201ENST00000269122 KCNJ4P48050 445 aa10.18□□□□□ -0.78
CLTC-201ENST00000269122 LMOD2Q6P5Q4 547 aa10.17□□□□□ -0.78
CLTC-201ENST00000269122 PRKCSHP14314 528 aaPredicted RBP10.17□□□□□ -0.78
CLTC-201ENST00000269122 NOL8Q76FK4 1167 aaKnown RBP10.17□□□□□ -0.78
CLTC-201ENST00000269122 FOXD4L6Q3SYB3 417 aaPredicted RBP10.16□□□□□ -0.78
CLTC-201ENST00000269122 FOXD4L3Q6VB84 417 aaPredicted RBP10.16□□□□□ -0.78
CLTC-201ENST00000269122 PTMSP20962 102 aa10.16□□□□□ -0.78
CLTC-201ENST00000269122 KNSTRNQ9Y448 316 aa10.16□□□□□ -0.78
CLTC-201ENST00000269122 MFAP1P55081 439 aaKnown RBP10.15□□□□□ -0.78
CLTC-201ENST00000269122 KIAA2012Q0VF49 1180 aa10.15□□□□□ -0.78
CLTC-201ENST00000269122 RSPH6AQ9H0K4 717 aa10.14□□□□□ -0.79
CLTC-201ENST00000269122 OS9Q13438 667 aaPredicted RBP10.14□□□□□ -0.79
CLTC-201ENST00000269122 FAM13BQ9NYF5 915 aa10.14□□□□□ -0.79
CLTC-201ENST00000269122 CARD11Q9BXL7 1154 aa10.14□□□□□ -0.79
CLTC-201ENST00000269122 PPP1R15AO75807 674 aaPredicted RBP10.14□□□□□ -0.79
CLTC-201ENST00000269122 ZNF771Q7L3S4 317 aaPredicted RBP10.13□□□□□ -0.79
CLTC-201ENST00000269122 U2SURPO15042 1029 aaKnown RBP10.12□□□□□ -0.79
CLTC-201ENST00000269122 PATL2C9JE40 543 aaKnown RBP10.12□□□□□ -0.79
CLTC-201ENST00000269122 IL27Q8NEV9 243 aa10.12□□□□□ -0.79
CLTC-201ENST00000269122 PKNOX2Q96KN3 472 aa10.12□□□□□ -0.79
CLTC-201ENST00000269122 SOX12O15370 315 aa10.12□□□□□ -0.79
CLTC-201ENST00000269122 CLSTN1O94985 981 aa10.12□□□□□ -0.79
CLTC-201ENST00000269122 MAPK8IP2Q13387 824 aaPredicted RBP10.11□□□□□ -0.79
CLTC-201ENST00000269122 NRDCO43847 1150 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms