RNA–Protein interactions for RNA: ENST00000268603.8

CDH11-201, Transcript of cadherin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH11, Length 6,857 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-201ENST00000268603 CCDC136Q96JN2 1154 aa16.69■□□□□ 0.26
CDH11-201ENST00000268603 TMC1Q8TDI8 760 aa16.68■□□□□ 0.26
CDH11-201ENST00000268603 LMOD2Q6P5Q4 547 aa16.66■□□□□ 0.26
CDH11-201ENST00000268603 KDM2AQ9Y2K7 1162 aa16.65■□□□□ 0.26
CDH11-201ENST00000268603 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
CDH11-201ENST00000268603 ISY1Q9ULR0 285 aaKnown RBP16.64■□□□□ 0.25
CDH11-201ENST00000268603 ARID4BQ4LE39 1312 aaPredicted RBP16.64■□□□□ 0.25
CDH11-201ENST00000268603 GOLGA2Q08379 1002 aa16.62■□□□□ 0.25
CDH11-201ENST00000268603 GOLGA6L22H0YM25 854 aa16.6■□□□□ 0.25
CDH11-201ENST00000268603 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
CDH11-201ENST00000268603 TONSLQ96HA7 1378 aa16.6■□□□□ 0.25
CDH11-201ENST00000268603 PLCB2Q00722 1185 aa16.59■□□□□ 0.25
CDH11-201ENST00000268603 PPM1GO15355 546 aaPredicted RBP16.57■□□□□ 0.24
CDH11-201ENST00000268603 CASC1Q6TDU7 716 aa16.57■□□□□ 0.24
CDH11-201ENST00000268603 ACIN1Q9UKV3 1341 aaKnown RBP16.57■□□□□ 0.24
CDH11-201ENST00000268603 FGD1P98174 961 aa16.54■□□□□ 0.24
CDH11-201ENST00000268603 BECN1Q14457 450 aa16.54■□□□□ 0.24
CDH11-201ENST00000268603 CHIC2Q9UKJ5 165 aa16.53■□□□□ 0.24
CDH11-201ENST00000268603 LAS1LQ9Y4W2 734 aaKnown RBP16.52■□□□□ 0.24
CDH11-201ENST00000268603 NAP1L5Q96NT1 182 aaPredicted RBP16.52■□□□□ 0.23
CDH11-201ENST00000268603 GOLGA6L6A8MZA4 724 aa16.5■□□□□ 0.23
CDH11-201ENST00000268603 DDX10Q13206 875 aaKnown RBP16.5■□□□□ 0.23
CDH11-201ENST00000268603 OS9Q13438 667 aaPredicted RBP16.49■□□□□ 0.23
CDH11-201ENST00000268603 ANP32EQ9BTT0 268 aa16.48■□□□□ 0.23
CDH11-201ENST00000268603 KRI1Q8N9T8 703 aaKnown RBP16.48■□□□□ 0.23
CDH11-201ENST00000268603 IRX6P78412 446 aaPredicted RBP16.47■□□□□ 0.23
CDH11-201ENST00000268603 ABCC9O60706 1549 aa16.46■□□□□ 0.23
CDH11-201ENST00000268603 DDRGK1Q96HY6 314 aa16.45■□□□□ 0.22
CDH11-201ENST00000268603 KCNJ4P48050 445 aa16.44■□□□□ 0.22
CDH11-201ENST00000268603 MRS2Q9HD23 443 aa16.43■□□□□ 0.22
CDH11-201ENST00000268603 PDE4CQ08493 712 aa16.42■□□□□ 0.22
CDH11-201ENST00000268603 TSPY4P0CV99 314 aa16.41■□□□□ 0.22
CDH11-201ENST00000268603 TSPY10P0CW01 314 aa16.41■□□□□ 0.22
CDH11-201ENST00000268603 FTSJ3Q8IY81 847 aaKnown RBP16.41■□□□□ 0.22
CDH11-201ENST00000268603 PNNQ9H307 717 aaKnown RBP16.38■□□□□ 0.21
CDH11-201ENST00000268603 NRDCO43847 1150 aa16.37■□□□□ 0.21
CDH11-201ENST00000268603 CFAP53Q96M91 514 aa16.37■□□□□ 0.21
CDH11-201ENST00000268603 NOC3LQ8WTT2 800 aaKnown RBP16.37■□□□□ 0.21
CDH11-201ENST00000268603 KCNH8Q96L42 1107 aa16.36■□□□□ 0.21
CDH11-201ENST00000268603 SENP3-EIF4A1A0A087X0R7 540 aa16.36■□□□□ 0.21
CDH11-201ENST00000268603 RTN4Q9NQC3 1192 aaKnown RBP16.35■□□□□ 0.21
CDH11-201ENST00000268603 KIAA2012Q0VF49 1180 aa16.34■□□□□ 0.21
CDH11-201ENST00000268603 NEUROD2Q15784 382 aa16.33■□□□□ 0.21
CDH11-201ENST00000268603 ERICH6BQ5W0A0 696 aa16.33■□□□□ 0.2
CDH11-201ENST00000268603 GOLGA6L4A6NEF3 574 aa16.33■□□□□ 0.2
CDH11-201ENST00000268603 ANO8Q9HCE9 1232 aaPredicted RBP16.32■□□□□ 0.2
CDH11-201ENST00000268603 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
CDH11-201ENST00000268603 TMX4Q9H1E5 349 aaPredicted RBP16.31■□□□□ 0.2
CDH11-201ENST00000268603 MAPK8IP3Q9UPT6 1336 aa16.3■□□□□ 0.2
CDH11-201ENST00000268603 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
CDH11-201ENST00000268603 L1TD1Q5T7N2 865 aaKnown RBP16.3■□□□□ 0.2
CDH11-201ENST00000268603 EIF4G2P78344 907 aaKnown RBP eCLIP16.3■□□□□ 0.2
CDH11-201ENST00000268603 FBXO3Q9UK99 471 aa16.29■□□□□ 0.2
CDH11-201ENST00000268603 DRC7Q8IY82 874 aa16.29■□□□□ 0.2
CDH11-201ENST00000268603 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
CDH11-201ENST00000268603 CHAF1AQ13111 956 aaPredicted RBP16.28■□□□□ 0.2
CDH11-201ENST00000268603 HSP90AB1P08238 724 aaKnown RBP16.28■□□□□ 0.2
CDH11-201ENST00000268603 RGL3Q3MIN7 710 aa16.28■□□□□ 0.2
CDH11-201ENST00000268603 SOX12O15370 315 aa16.27■□□□□ 0.19
CDH11-201ENST00000268603 POGKQ9P215 609 aa16.26■□□□□ 0.19
CDH11-201ENST00000268603 HIRIP3Q9BW71 556 aaPredicted RBP16.25■□□□□ 0.19
CDH11-201ENST00000268603 ZNF330Q9Y3S2 320 aaPredicted RBP16.24■□□□□ 0.19
CDH11-201ENST00000268603 A0A0U1RQG5 324 aaPredicted RBP16.23■□□□□ 0.19
CDH11-201ENST00000268603 CHMP7Q8WUX9 453 aaPredicted RBP16.23■□□□□ 0.19
CDH11-201ENST00000268603 G3V3G9 751 aa16.22■□□□□ 0.19
CDH11-201ENST00000268603 DCAF8Q5TAQ9 597 aa16.22■□□□□ 0.19
CDH11-201ENST00000268603 CCDC9Q9Y3X0 531 aaKnown RBP16.22■□□□□ 0.19
CDH11-201ENST00000268603 FRAT1Q92837 279 aaPredicted RBP16.21■□□□□ 0.19
CDH11-201ENST00000268603 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
CDH11-201ENST00000268603 NUDCQ9Y266 331 aa16.18■□□□□ 0.18
CDH11-201ENST00000268603 U2SURPO15042 1029 aaKnown RBP16.18■□□□□ 0.18
CDH11-201ENST00000268603 TNNT3P45378 269 aaPredicted RBP16.17■□□□□ 0.18
CDH11-201ENST00000268603 MYO15BQ96JP2 1530 aa16.16■□□□□ 0.18
CDH11-201ENST00000268603 RGS3P49796 1198 aa16.16■□□□□ 0.18
CDH11-201ENST00000268603 WWC1Q8IX03 1113 aa16.16■□□□□ 0.18
CDH11-201ENST00000268603 MSNP26038 577 aaKnown RBP16.15■□□□□ 0.18
CDH11-201ENST00000268603 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
CDH11-201ENST00000268603 VPS53Q5VIR6 699 aa16.13■□□□□ 0.17
CDH11-201ENST00000268603 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
CDH11-201ENST00000268603 CNKSR2Q8WXI2 1034 aa16.12■□□□□ 0.17
CDH11-201ENST00000268603 ARID3AQ99856 593 aa16.12■□□□□ 0.17
CDH11-201ENST00000268603 RRP7BPQ9NSQ0 103 aa16.12■□□□□ 0.17
CDH11-201ENST00000268603 MCCP23508 829 aa16.11■□□□□ 0.17
CDH11-201ENST00000268603 MLECQ14165 292 aa16.11■□□□□ 0.17
CDH11-201ENST00000268603 CSB-PGBD3P0DP91 1061 aa16.1■□□□□ 0.17
CDH11-201ENST00000268603 CREBRFQ8IUR6 639 aa16.1■□□□□ 0.17
CDH11-201ENST00000268603 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
CDH11-201ENST00000268603 CEP89Q96ST8 783 aa16.09■□□□□ 0.17
CDH11-201ENST00000268603 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
CDH11-201ENST00000268603 CHMP4BQ9H444 224 aaKnown RBP16.08■□□□□ 0.17
CDH11-201ENST00000268603 SCRIBQ14160 1630 aa16.07■□□□□ 0.16
CDH11-201ENST00000268603 MTUS2Q5JR59 1369 aa16.07■□□□□ 0.16
CDH11-201ENST00000268603 RASSF8Q8NHQ8 419 aa16.07■□□□□ 0.16
CDH11-201ENST00000268603 APBB1O00213 710 aa16.06■□□□□ 0.16
CDH11-201ENST00000268603 HSP90B1P14625 803 aaKnown RBP16.06■□□□□ 0.16
CDH11-201ENST00000268603 PAK3O75914 559 aaPredicted RBP16.05■□□□□ 0.16
CDH11-201ENST00000268603 HSCBQ8IWL3 235 aa16.04■□□□□ 0.16
CDH11-201ENST00000268603 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
CDH11-201ENST00000268603 CHMP3Q9Y3E7 222 aa16.04■□□□□ 0.16
CDH11-201ENST00000268603 GORABQ5T7V8 394 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms