RNA–Protein interactions for RNA: ENST00000268138.11

TICRR-201, Transcript of TOPBP1 interacting checkpoint and replication regulator, humanhuman

APPRIS P3 TSL 5 BASIC

Gene TICRR, Length 6,775 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TICRR-201ENST00000268138 SOX12O15370 315 aa18.62■□□□□ 0.57
TICRR-201ENST00000268138 MTUS2Q5JR59 1369 aa18.62■□□□□ 0.57
TICRR-201ENST00000268138 CCDC9Q9Y3X0 531 aaKnown RBP18.62■□□□□ 0.57
TICRR-201ENST00000268138 TONSLQ96HA7 1378 aa18.59■□□□□ 0.57
TICRR-201ENST00000268138 RB1CC1Q8TDY2 1594 aa18.59■□□□□ 0.57
TICRR-201ENST00000268138 FAM9BQ8IZU0 186 aa18.54■□□□□ 0.56
TICRR-201ENST00000268138 GLIPR1L2Q4G1C9 344 aa18.53■□□□□ 0.56
TICRR-201ENST00000268138 POGKQ9P215 609 aa18.53■□□□□ 0.56
TICRR-201ENST00000268138 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.56
TICRR-201ENST00000268138 TAOK2Q9UL54 1235 aa18.51■□□□□ 0.55
TICRR-201ENST00000268138 HSP90AA1P07900 732 aaKnown RBP18.49■□□□□ 0.55
TICRR-201ENST00000268138 ANP32BQ92688 251 aaKnown RBP18.48■□□□□ 0.55
TICRR-201ENST00000268138 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
TICRR-201ENST00000268138 PHF23Q9BUL5 403 aaPredicted RBP18.46■□□□□ 0.55
TICRR-201ENST00000268138 HIRIP3Q9BW71 556 aaPredicted RBP18.44■□□□□ 0.54
TICRR-201ENST00000268138 EIF4G1Q04637 1599 aaKnown RBP18.44■□□□□ 0.54
TICRR-201ENST00000268138 SAFB2Q14151 953 aaKnown RBP eCLIP18.44■□□□□ 0.54
TICRR-201ENST00000268138 HNRNPUQ00839 825 aaKnown RBP eCLIP18.44■□□□□ 0.54
TICRR-201ENST00000268138 CFDP1Q9UEE9 299 aaPredicted RBP18.44■□□□□ 0.54
TICRR-201ENST00000268138 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
TICRR-201ENST00000268138 GGT6Q6P531 493 aa18.42■□□□□ 0.54
TICRR-201ENST00000268138 TNNT2P45379 298 aaPredicted RBP18.41■□□□□ 0.54
TICRR-201ENST00000268138 PAK3O75914 559 aaPredicted RBP18.41■□□□□ 0.54
TICRR-201ENST00000268138 BAZ1BQ9UIG0 1483 aaKnown RBP18.39■□□□□ 0.53
TICRR-201ENST00000268138 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
TICRR-201ENST00000268138 DDX10Q13206 875 aaKnown RBP18.37■□□□□ 0.53
TICRR-201ENST00000268138 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.37■□□□□ 0.53
TICRR-201ENST00000268138 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
TICRR-201ENST00000268138 CYB5RLQ6IPT4 315 aa18.35■□□□□ 0.53
TICRR-201ENST00000268138 ZNF330Q9Y3S2 320 aaPredicted RBP18.34■□□□□ 0.53
TICRR-201ENST00000268138 STK26Q9P289 416 aa18.33■□□□□ 0.53
TICRR-201ENST00000268138 CSB-PGBD3P0DP91 1061 aa18.32■□□□□ 0.52
TICRR-201ENST00000268138 MYH16Q9H6N6 1097 aa18.31■□□□□ 0.52
TICRR-201ENST00000268138 CCDC136Q96JN2 1154 aa18.31■□□□□ 0.52
TICRR-201ENST00000268138 UPF2Q9HAU5 1272 aaKnown RBP18.3■□□□□ 0.52
TICRR-201ENST00000268138 MEX3CQ5U5Q3 659 aaKnown RBP18.29■□□□□ 0.52
TICRR-201ENST00000268138 CDK11BP21127 795 aaKnown RBP18.29■□□□□ 0.52
TICRR-201ENST00000268138 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
TICRR-201ENST00000268138 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
TICRR-201ENST00000268138 ISY1Q9ULR0 285 aaKnown RBP18.27■□□□□ 0.52
TICRR-201ENST00000268138 MIER1Q8N108 512 aa18.26■□□□□ 0.51
TICRR-201ENST00000268138 TPRNQ4KMQ1 711 aa18.25■□□□□ 0.51
TICRR-201ENST00000268138 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
TICRR-201ENST00000268138 ZCCHC6Q5VYS8 1495 aaKnown RBP18.23■□□□□ 0.51
TICRR-201ENST00000268138 HDGFP51858 240 aaKnown RBP18.23■□□□□ 0.51
TICRR-201ENST00000268138 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
TICRR-201ENST00000268138 NUTM2DQ5VT03 806 aaPredicted RBP18.21■□□□□ 0.51
TICRR-201ENST00000268138 MSH5O43196 834 aa18.2■□□□□ 0.5
TICRR-201ENST00000268138 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
TICRR-201ENST00000268138 U2SURPO15042 1029 aaKnown RBP18.17■□□□□ 0.5
TICRR-201ENST00000268138 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
TICRR-201ENST00000268138 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
TICRR-201ENST00000268138 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.16■□□□□ 0.5
TICRR-201ENST00000268138 KANK1Q14678 1352 aa18.14■□□□□ 0.49
TICRR-201ENST00000268138 RSF1Q96T23 1441 aaPredicted RBP18.14■□□□□ 0.49
TICRR-201ENST00000268138 CLSTN1O94985 981 aa18.13■□□□□ 0.49
TICRR-201ENST00000268138 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
TICRR-201ENST00000268138 RTN4Q9NQC3 1192 aaKnown RBP18.12■□□□□ 0.49
TICRR-201ENST00000268138 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
TICRR-201ENST00000268138 OS9Q13438 667 aaPredicted RBP18.12■□□□□ 0.49
TICRR-201ENST00000268138 KNSTRNQ9Y448 316 aa18.12■□□□□ 0.49
TICRR-201ENST00000268138 TMX4Q9H1E5 349 aaPredicted RBP18.12■□□□□ 0.49
TICRR-201ENST00000268138 DCAF1Q9Y4B6 1507 aa18.11■□□□□ 0.49
TICRR-201ENST00000268138 MAPK8IP3Q9UPT6 1336 aa18.11■□□□□ 0.49
TICRR-201ENST00000268138 CARD11Q9BXL7 1154 aa18.1■□□□□ 0.49
TICRR-201ENST00000268138 NAP1L2Q9ULW6 460 aaPredicted RBP18.07■□□□□ 0.48
TICRR-201ENST00000268138 CC2D1BQ5T0F9 858 aaKnown RBP18.06■□□□□ 0.48
TICRR-201ENST00000268138 G3V3G9 751 aa18.06■□□□□ 0.48
TICRR-201ENST00000268138 DCAF8Q5TAQ9 597 aa18.06■□□□□ 0.48
TICRR-201ENST00000268138 CLIP1P30622 1438 aa18.06■□□□□ 0.48
TICRR-201ENST00000268138 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
TICRR-201ENST00000268138 CCNB3Q8WWL7 1395 aa18.05■□□□□ 0.48
TICRR-201ENST00000268138 AMER1Q5JTC6 1135 aaPredicted RBP18.02■□□□□ 0.48
TICRR-201ENST00000268138 KIF27Q86VH2 1401 aa18.02■□□□□ 0.47
TICRR-201ENST00000268138 CCDC180Q9P1Z9 1646 aa18.02■□□□□ 0.47
TICRR-201ENST00000268138 TRIM44Q96DX7 344 aaPredicted RBP18.01■□□□□ 0.47
TICRR-201ENST00000268138 EIF4G2P78344 907 aaKnown RBP eCLIP18.01■□□□□ 0.47
TICRR-201ENST00000268138 NUDCQ9Y266 331 aa17.99■□□□□ 0.47
TICRR-201ENST00000268138 LTV1Q96GA3 475 aaPredicted RBP17.99■□□□□ 0.47
TICRR-201ENST00000268138 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
TICRR-201ENST00000268138 NACADO15069 1562 aa17.98■□□□□ 0.47
TICRR-201ENST00000268138 DCAF11Q8TEB1 546 aa17.98■□□□□ 0.47
TICRR-201ENST00000268138 EVA1CP58658 441 aa17.97■□□□□ 0.47
TICRR-201ENST00000268138 DCAF8L1A6NGE4 600 aa17.97■□□□□ 0.47
TICRR-201ENST00000268138 CDCA8Q53HL2 280 aa17.97■□□□□ 0.47
TICRR-201ENST00000268138 DDRGK1Q96HY6 314 aa17.96■□□□□ 0.47
TICRR-201ENST00000268138 WRNQ14191 1432 aaPredicted RBP eCLIP17.96■□□□□ 0.47
TICRR-201ENST00000268138 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
TICRR-201ENST00000268138 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
TICRR-201ENST00000268138 CUX2O14529 1486 aa17.95■□□□□ 0.46
TICRR-201ENST00000268138 RTF1Q92541 710 aaKnown RBP17.93■□□□□ 0.46
TICRR-201ENST00000268138 PDS5BQ9NTI5 1447 aa17.93■□□□□ 0.46
TICRR-201ENST00000268138 KIF3BO15066 747 aa17.93■□□□□ 0.46
TICRR-201ENST00000268138 NGDNQ8NEJ9 315 aaKnown RBP17.93■□□□□ 0.46
TICRR-201ENST00000268138 NAP1L5Q96NT1 182 aaPredicted RBP17.92■□□□□ 0.46
TICRR-201ENST00000268138 FRAT1Q92837 279 aaPredicted RBP17.91■□□□□ 0.46
TICRR-201ENST00000268138 BECN1Q14457 450 aa17.9■□□□□ 0.46
TICRR-201ENST00000268138 SUPT16HQ9Y5B9 1047 aaKnown RBP17.9■□□□□ 0.46
TICRR-201ENST00000268138 FAM69CQ0P6D2 419 aa17.9■□□□□ 0.46
TICRR-201ENST00000268138 CARMIL2Q6F5E8 1435 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms