RNA–Protein interactions for RNA: ENST00000263710.8

CLASP1-201, Transcript of cytoplasmic linker associated protein 1, humanhuman

TSL 5 BASIC

Gene CLASP1, Length 8,092 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLASP1-201ENST00000263710 RB1CC1Q8TDY2 1594 aa13.64□□□□□ -0.23
CLASP1-201ENST00000263710 TRHP20396 242 aaPredicted RBP13.6□□□□□ -0.23
CLASP1-201ENST00000263710 LMOD2Q6P5Q4 547 aa13.6□□□□□ -0.23
CLASP1-201ENST00000263710 FKBP8Q14318 412 aa13.6□□□□□ -0.23
CLASP1-201ENST00000263710 DDX10Q13206 875 aaKnown RBP13.59□□□□□ -0.23
CLASP1-201ENST00000263710 CCDC136Q96JN2 1154 aa13.58□□□□□ -0.24
CLASP1-201ENST00000263710 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
CLASP1-201ENST00000263710 NCLP19338 710 aaKnown RBP13.54□□□□□ -0.24
CLASP1-201ENST00000263710 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
CLASP1-201ENST00000263710 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
CLASP1-201ENST00000263710 CASC1Q6TDU7 716 aa13.52□□□□□ -0.24
CLASP1-201ENST00000263710 CFAP53Q96M91 514 aa13.52□□□□□ -0.25
CLASP1-201ENST00000263710 ZRSR1Q15695 479 aaKnown RBP13.52□□□□□ -0.25
CLASP1-201ENST00000263710 MRS2Q9HD23 443 aa13.5□□□□□ -0.25
CLASP1-201ENST00000263710 GOLGA2Q08379 1002 aa13.5□□□□□ -0.25
CLASP1-201ENST00000263710 RSF1Q96T23 1441 aaPredicted RBP13.5□□□□□ -0.25
CLASP1-201ENST00000263710 RGL3Q3MIN7 710 aa13.5□□□□□ -0.25
CLASP1-201ENST00000263710 RRP7BPQ9NSQ0 103 aa13.49□□□□□ -0.25
CLASP1-201ENST00000263710 LAS1LQ9Y4W2 734 aaKnown RBP13.49□□□□□ -0.25
CLASP1-201ENST00000263710 POGKQ9P215 609 aa13.47□□□□□ -0.25
CLASP1-201ENST00000263710 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
CLASP1-201ENST00000263710 CDCA8Q53HL2 280 aa13.45□□□□□ -0.26
CLASP1-201ENST00000263710 FTSJ3Q8IY81 847 aaKnown RBP13.45□□□□□ -0.26
CLASP1-201ENST00000263710 NBR1Q14596 966 aa13.45□□□□□ -0.26
CLASP1-201ENST00000263710 BECN1Q14457 450 aa13.44□□□□□ -0.26
CLASP1-201ENST00000263710 EIF4G2P78344 907 aaKnown RBP eCLIP13.43□□□□□ -0.261e-7■■■■■ 83.7
CLASP1-201ENST00000263710 KNSTRNQ9Y448 316 aa13.43□□□□□ -0.26
CLASP1-201ENST00000263710 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
CLASP1-201ENST00000263710 MAPK8IP3Q9UPT6 1336 aa13.41□□□□□ -0.26
CLASP1-201ENST00000263710 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
CLASP1-201ENST00000263710 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
CLASP1-201ENST00000263710 NCBP3Q53F19 620 aaKnown RBP13.41□□□□□ -0.26
CLASP1-201ENST00000263710 GLIPR1L2Q4G1C9 344 aa13.4□□□□□ -0.26
CLASP1-201ENST00000263710 GOLGA6L22H0YM25 854 aa13.4□□□□□ -0.26
CLASP1-201ENST00000263710 ACIN1Q9UKV3 1341 aaKnown RBP13.4□□□□□ -0.26
CLASP1-201ENST00000263710 CFDP1Q9UEE9 299 aaPredicted RBP13.39□□□□□ -0.27
CLASP1-201ENST00000263710 EIF4G1Q04637 1599 aaKnown RBP13.38□□□□□ -0.27
CLASP1-201ENST00000263710 BAZ1BQ9UIG0 1483 aaKnown RBP13.38□□□□□ -0.27
CLASP1-201ENST00000263710 HDGFP51858 240 aaKnown RBP13.38□□□□□ -0.27
CLASP1-201ENST00000263710 MLECQ14165 292 aa13.38□□□□□ -0.27
CLASP1-201ENST00000263710 HIRIP3Q9BW71 556 aaPredicted RBP13.38□□□□□ -0.27
CLASP1-201ENST00000263710 CLSTN1O94985 981 aa13.38□□□□□ -0.27
CLASP1-201ENST00000263710 NUDCQ9Y266 331 aa13.36□□□□□ -0.27
CLASP1-201ENST00000263710 TRIM44Q96DX7 344 aaPredicted RBP13.36□□□□□ -0.27
CLASP1-201ENST00000263710 NAP1L2Q9ULW6 460 aaPredicted RBP13.36□□□□□ -0.27
CLASP1-201ENST00000263710 KANK1Q14678 1352 aa13.36□□□□□ -0.27
CLASP1-201ENST00000263710 FGD1P98174 961 aa13.36□□□□□ -0.27
CLASP1-201ENST00000263710 DDRGK1Q96HY6 314 aa13.36□□□□□ -0.27
CLASP1-201ENST00000263710 PNNQ9H307 717 aaKnown RBP13.36□□□□□ -0.27
CLASP1-201ENST00000263710 CLIP1P30622 1438 aa13.35□□□□□ -0.27
CLASP1-201ENST00000263710 IRX6P78412 446 aaPredicted RBP13.35□□□□□ -0.27
CLASP1-201ENST00000263710 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
CLASP1-201ENST00000263710 TNNT2P45379 298 aaPredicted RBP13.33□□□□□ -0.28
CLASP1-201ENST00000263710 KCNJ4P48050 445 aa13.32□□□□□ -0.28
CLASP1-201ENST00000263710 NEUROD2Q15784 382 aa13.32□□□□□ -0.28
CLASP1-201ENST00000263710 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
CLASP1-201ENST00000263710 TMX4Q9H1E5 349 aaPredicted RBP13.31□□□□□ -0.28
CLASP1-201ENST00000263710 SOX12O15370 315 aa13.31□□□□□ -0.28
CLASP1-201ENST00000263710 CARD11Q9BXL7 1154 aa13.31□□□□□ -0.28
CLASP1-201ENST00000263710 U2SURPO15042 1029 aaKnown RBP13.3□□□□□ -0.28
CLASP1-201ENST00000263710 NACADO15069 1562 aa13.29□□□□□ -0.28
CLASP1-201ENST00000263710 GOLGA3Q08378 1498 aa13.29□□□□□ -0.28
CLASP1-201ENST00000263710 ANP32EQ9BTT0 268 aa13.29□□□□□ -0.28
CLASP1-201ENST00000263710 CHMP4BQ9H444 224 aaKnown RBP13.27□□□□□ -0.28
CLASP1-201ENST00000263710 DNTTIP2Q5QJE6 756 aaKnown RBP13.27□□□□□ -0.28
CLASP1-201ENST00000263710 GOLGA6L6A8MZA4 724 aa13.27□□□□□ -0.29
CLASP1-201ENST00000263710 SRPK2P78362 688 aaKnown RBP13.26□□□□□ -0.29
CLASP1-201ENST00000263710 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
CLASP1-201ENST00000263710 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
CLASP1-201ENST00000263710 CCDC9Q9Y3X0 531 aaKnown RBP13.25□□□□□ -0.29
CLASP1-201ENST00000263710 DCAF1Q9Y4B6 1507 aa13.24□□□□□ -0.29
CLASP1-201ENST00000263710 SENP3-EIF4A1A0A087X0R7 540 aa13.23□□□□□ -0.29
CLASP1-201ENST00000263710 RTF1Q92541 710 aaKnown RBP13.23□□□□□ -0.29
CLASP1-201ENST00000263710 CC2D1BQ5T0F9 858 aaKnown RBP13.23□□□□□ -0.29
CLASP1-201ENST00000263710 FRAT1Q92837 279 aaPredicted RBP13.23□□□□□ -0.29
CLASP1-201ENST00000263710 HSP90AB1P08238 724 aaKnown RBP13.21□□□□□ -0.3
CLASP1-201ENST00000263710 PLCB2Q00722 1185 aa13.21□□□□□ -0.3
CLASP1-201ENST00000263710 CSB-PGBD3P0DP91 1061 aa13.2□□□□□ -0.3
CLASP1-201ENST00000263710 MS4A1P11836 297 aa13.2□□□□□ -0.3
CLASP1-201ENST00000263710 CCNB3Q8WWL7 1395 aa13.19□□□□□ -0.3
CLASP1-201ENST00000263710 G3V3G9 751 aa13.19□□□□□ -0.3
CLASP1-201ENST00000263710 DCAF8Q5TAQ9 597 aa13.19□□□□□ -0.3
CLASP1-201ENST00000263710 SAFB2Q14151 953 aaKnown RBP eCLIP13.19□□□□□ -0.32e-6■□□□□ 10
CLASP1-201ENST00000263710 GNL2Q13823 731 aaKnown RBP13.18□□□□□ -0.3
CLASP1-201ENST00000263710 ZNF330Q9Y3S2 320 aaPredicted RBP13.18□□□□□ -0.3
CLASP1-201ENST00000263710 STK26Q9P289 416 aa13.17□□□□□ -0.3
CLASP1-201ENST00000263710 TMF1P82094 1093 aa13.16□□□□□ -0.3
CLASP1-201ENST00000263710 NRDCO43847 1150 aa13.16□□□□□ -0.3
CLASP1-201ENST00000263710 MCCP23508 829 aa13.16□□□□□ -0.3
CLASP1-201ENST00000263710 EEA1Q15075 1411 aa13.16□□□□□ -0.3
CLASP1-201ENST00000263710 GOLGA6L4A6NEF3 574 aa13.15□□□□□ -0.3
CLASP1-201ENST00000263710 GGT6Q6P531 493 aa13.14□□□□□ -0.31
CLASP1-201ENST00000263710 WRNQ14191 1432 aaPredicted RBP eCLIP13.14□□□□□ -0.319e-6■■■■■ 50.1
CLASP1-201ENST00000263710 HDGFL2Q7Z4V5 671 aaPredicted RBP13.13□□□□□ -0.31
CLASP1-201ENST00000263710 PRM3Q9NNZ6 103 aa13.13□□□□□ -0.31
CLASP1-201ENST00000263710 DCAF11Q8TEB1 546 aa13.13□□□□□ -0.31
CLASP1-201ENST00000263710 CEP162Q5TB80 1403 aa13.12□□□□□ -0.31
CLASP1-201ENST00000263710 CEP164Q9UPV0 1460 aa13.12□□□□□ -0.31
CLASP1-201ENST00000263710 AEBP2Q6ZN18 517 aaPredicted RBP13.11□□□□□ -0.31
CLASP1-201ENST00000263710 MORC1Q86VD1 984 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms