RNA–Protein interactions for RNA: ENST00000262519.13

SETD1A-201, Transcript of SET domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SETD1A, Length 6,451 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETD1A-201ENST00000262519 HIRIP3Q9BW71 556 aaPredicted RBP18.57■□□□□ 0.56
SETD1A-201ENST00000262519 ABCC9O60706 1549 aa18.53■□□□□ 0.56
SETD1A-201ENST00000262519 NPHP1O15259 732 aa18.51■□□□□ 0.55
SETD1A-201ENST00000262519 PPM1GO15355 546 aaPredicted RBP18.49■□□□□ 0.55
SETD1A-201ENST00000262519 PPP1R15AO75807 674 aaPredicted RBP18.47■□□□□ 0.55
SETD1A-201ENST00000262519 PTMAP06454 111 aaKnown RBP18.46■□□□□ 0.55
SETD1A-201ENST00000262519 ZRSR1Q15695 479 aaKnown RBP18.46■□□□□ 0.55
SETD1A-201ENST00000262519 TRIM44Q96DX7 344 aaPredicted RBP18.46■□□□□ 0.55
SETD1A-201ENST00000262519 MRS2Q9HD23 443 aa18.46■□□□□ 0.55
SETD1A-201ENST00000262519 CLSTN1O94985 981 aa18.45■□□□□ 0.54
SETD1A-201ENST00000262519 LMOD2Q6P5Q4 547 aa18.45■□□□□ 0.54
SETD1A-201ENST00000262519 DNTTIP2Q5QJE6 756 aaKnown RBP18.44■□□□□ 0.54
SETD1A-201ENST00000262519 PLCB2Q00722 1185 aa18.44■□□□□ 0.54
SETD1A-201ENST00000262519 AMER1Q5JTC6 1135 aaPredicted RBP18.43■□□□□ 0.54
SETD1A-201ENST00000262519 LAS1LQ9Y4W2 734 aaKnown RBP18.43■□□□□ 0.54
SETD1A-201ENST00000262519 NAP1L2Q9ULW6 460 aaPredicted RBP18.38■□□□□ 0.53
SETD1A-201ENST00000262519 ARID4BQ4LE39 1312 aaPredicted RBP18.38■□□□□ 0.53
SETD1A-201ENST00000262519 RTN4Q9NQC3 1192 aaKnown RBP18.35■□□□□ 0.53
SETD1A-201ENST00000262519 NEUROD2Q15784 382 aa18.34■□□□□ 0.53
SETD1A-201ENST00000262519 KCNH8Q96L42 1107 aa18.32■□□□□ 0.52
SETD1A-201ENST00000262519 RGL3Q3MIN7 710 aa18.3■□□□□ 0.52
SETD1A-201ENST00000262519 ISY1Q9ULR0 285 aaKnown RBP18.3■□□□□ 0.52
SETD1A-201ENST00000262519 GOLGA6L22H0YM25 854 aa18.29■□□□□ 0.52
SETD1A-201ENST00000262519 BECN1Q14457 450 aa18.29■□□□□ 0.52
SETD1A-201ENST00000262519 CSRNP3Q8WYN3 585 aa18.26■□□□□ 0.51
SETD1A-201ENST00000262519 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
SETD1A-201ENST00000262519 TSPY4P0CV99 314 aa18.24■□□□□ 0.51
SETD1A-201ENST00000262519 TSPY10P0CW01 314 aa18.24■□□□□ 0.51
SETD1A-201ENST00000262519 NAP1L5Q96NT1 182 aaPredicted RBP18.24■□□□□ 0.51
SETD1A-201ENST00000262519 OS9Q13438 667 aaPredicted RBP18.23■□□□□ 0.51
SETD1A-201ENST00000262519 FGD1P98174 961 aa18.23■□□□□ 0.51
SETD1A-201ENST00000262519 CASC1Q6TDU7 716 aa18.22■□□□□ 0.51
SETD1A-201ENST00000262519 FTSJ3Q8IY81 847 aaKnown RBP18.22■□□□□ 0.51
SETD1A-201ENST00000262519 GOLGA2Q08379 1002 aa18.21■□□□□ 0.51
SETD1A-201ENST00000262519 SOX12O15370 315 aa18.21■□□□□ 0.51
SETD1A-201ENST00000262519 RRP7BPQ9NSQ0 103 aa18.21■□□□□ 0.51
SETD1A-201ENST00000262519 PRM3Q9NNZ6 103 aa18.18■□□□□ 0.5
SETD1A-201ENST00000262519 PDE4CQ08493 712 aa18.17■□□□□ 0.5
SETD1A-201ENST00000262519 DDRGK1Q96HY6 314 aa18.17■□□□□ 0.5
SETD1A-201ENST00000262519 RGS3P49796 1198 aa18.17■□□□□ 0.5
SETD1A-201ENST00000262519 FRAT1Q92837 279 aaPredicted RBP18.16■□□□□ 0.5
SETD1A-201ENST00000262519 KCNJ4P48050 445 aa18.16■□□□□ 0.5
SETD1A-201ENST00000262519 ERICH6BQ5W0A0 696 aa18.15■□□□□ 0.5
SETD1A-201ENST00000262519 ANO8Q9HCE9 1232 aaPredicted RBP18.14■□□□□ 0.49
SETD1A-201ENST00000262519 SPRYD3Q8NCJ5 442 aa18.14■□□□□ 0.49
SETD1A-201ENST00000262519 MIER1Q8N108 512 aa18.11■□□□□ 0.49
SETD1A-201ENST00000262519 CFAP53Q96M91 514 aa18.1■□□□□ 0.49
SETD1A-201ENST00000262519 CHMP7Q8WUX9 453 aaPredicted RBP18.08■□□□□ 0.49
SETD1A-201ENST00000262519 HSP90AB1P08238 724 aaKnown RBP18.08■□□□□ 0.49
SETD1A-201ENST00000262519 ARID3AQ99856 593 aa18.07■□□□□ 0.48
SETD1A-201ENST00000262519 MAPK8IP3Q9UPT6 1336 aa18.07■□□□□ 0.48
SETD1A-201ENST00000262519 U2SURPO15042 1029 aaKnown RBP18.05■□□□□ 0.48
SETD1A-201ENST00000262519 GOLGA6L6A8MZA4 724 aa18.05■□□□□ 0.48
SETD1A-201ENST00000262519 KNSTRNQ9Y448 316 aa18.04■□□□□ 0.48
SETD1A-201ENST00000262519 POGKQ9P215 609 aa18.04■□□□□ 0.48
SETD1A-201ENST00000262519 EIF4G2P78344 907 aaKnown RBP eCLIP18.04■□□□□ 0.48
SETD1A-201ENST00000262519 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
SETD1A-201ENST00000262519 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.02■□□□□ 0.48
SETD1A-201ENST00000262519 DRC7Q8IY82 874 aa18.02■□□□□ 0.48
SETD1A-201ENST00000262519 CC2D1BQ5T0F9 858 aaKnown RBP18.02■□□□□ 0.48
SETD1A-201ENST00000262519 SUPT16HQ9Y5B9 1047 aaKnown RBP18.01■□□□□ 0.47
SETD1A-201ENST00000262519 APBB1O00213 710 aa18.01■□□□□ 0.47
SETD1A-201ENST00000262519 GOLGA6L4A6NEF3 574 aa18.01■□□□□ 0.47
SETD1A-201ENST00000262519 MTUS2Q5JR59 1369 aa18.01■□□□□ 0.47
SETD1A-201ENST00000262519 ANP32EQ9BTT0 268 aa18■□□□□ 0.47
SETD1A-201ENST00000262519 MLECQ14165 292 aa17.99■□□□□ 0.47
SETD1A-201ENST00000262519 TRHP20396 242 aaPredicted RBP17.96■□□□□ 0.47
SETD1A-201ENST00000262519 GNL2Q13823 731 aaKnown RBP17.96■□□□□ 0.47
SETD1A-201ENST00000262519 SAFB2Q14151 953 aaKnown RBP eCLIP17.95■□□□□ 0.46
SETD1A-201ENST00000262519 FBXO3Q9UK99 471 aa17.94■□□□□ 0.46
SETD1A-201ENST00000262519 PNNQ9H307 717 aaKnown RBP17.93■□□□□ 0.46
SETD1A-201ENST00000262519 NOC3LQ8WTT2 800 aaKnown RBP17.92■□□□□ 0.46
SETD1A-201ENST00000262519 CARD11Q9BXL7 1154 aa17.91■□□□□ 0.46
SETD1A-201ENST00000262519 NUDCQ9Y266 331 aa17.9■□□□□ 0.46
SETD1A-201ENST00000262519 NRDCO43847 1150 aa17.89■□□□□ 0.45
SETD1A-201ENST00000262519 CHAF1AQ13111 956 aaPredicted RBP17.85■□□□□ 0.45
SETD1A-201ENST00000262519 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
SETD1A-201ENST00000262519 CREBRFQ8IUR6 639 aa17.84■□□□□ 0.45
SETD1A-201ENST00000262519 WWC1Q8IX03 1113 aa17.83■□□□□ 0.45
SETD1A-201ENST00000262519 PAK3O75914 559 aaPredicted RBP17.82■□□□□ 0.44
SETD1A-201ENST00000262519 HSCBQ8IWL3 235 aa17.82■□□□□ 0.44
SETD1A-201ENST00000262519 KIAA2012Q0VF49 1180 aa17.82■□□□□ 0.44
SETD1A-201ENST00000262519 PLEKHD1A6NEE1 506 aa17.82■□□□□ 0.44
SETD1A-201ENST00000262519 B4GALNT3Q6L9W6 998 aa17.82■□□□□ 0.44
SETD1A-201ENST00000262519 MSNP26038 577 aaKnown RBP17.81■□□□□ 0.44
SETD1A-201ENST00000262519 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
SETD1A-201ENST00000262519 SRPK2P78362 688 aaKnown RBP17.79■□□□□ 0.44
SETD1A-201ENST00000262519 CHMP3Q9Y3E7 222 aa17.78■□□□□ 0.44
SETD1A-201ENST00000262519 CSB-PGBD3P0DP91 1061 aa17.78■□□□□ 0.44
SETD1A-201ENST00000262519 CDCA8Q53HL2 280 aa17.78■□□□□ 0.44
SETD1A-201ENST00000262519 A0A0U1RQG5 324 aaPredicted RBP17.78■□□□□ 0.44
SETD1A-201ENST00000262519 GZF1Q9H116 711 aaPredicted RBP17.78■□□□□ 0.44
SETD1A-201ENST00000262519 STK26Q9P289 416 aa17.77■□□□□ 0.44
SETD1A-201ENST00000262519 NOP58Q9Y2X3 529 aaKnown RBP17.77■□□□□ 0.44
SETD1A-201ENST00000262519 MCCP23508 829 aa17.75■□□□□ 0.43
SETD1A-201ENST00000262519 VPS53Q5VIR6 699 aa17.74■□□□□ 0.43
SETD1A-201ENST00000262519 RTF1Q92541 710 aaKnown RBP17.74■□□□□ 0.43
SETD1A-201ENST00000262519 G3V3G9 751 aa17.73■□□□□ 0.43
SETD1A-201ENST00000262519 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
SETD1A-201ENST00000262519 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms