RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 POGKQ9P215 609 aa11.2□□□□□ -0.62
CCNT1-201ENST00000261900 GOLGA2Q08379 1002 aa11.2□□□□□ -0.62
CCNT1-201ENST00000261900 CFAP53Q96M91 514 aa11.2□□□□□ -0.62
CCNT1-201ENST00000261900 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
CCNT1-201ENST00000261900 MLECQ14165 292 aa11.18□□□□□ -0.62
CCNT1-201ENST00000261900 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
CCNT1-201ENST00000261900 TMX4Q9H1E5 349 aaPredicted RBP11.17□□□□□ -0.62
CCNT1-201ENST00000261900 SCRIBQ14160 1630 aa11.15□□□□□ -0.62
CCNT1-201ENST00000261900 CDCA8Q53HL2 280 aa11.15□□□□□ -0.62
CCNT1-201ENST00000261900 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
CCNT1-201ENST00000261900 FAM9BQ8IZU0 186 aa11.12□□□□□ -0.63
CCNT1-201ENST00000261900 ZRSR1Q15695 479 aaKnown RBP11.12□□□□□ -0.63
CCNT1-201ENST00000261900 RGL3Q3MIN7 710 aa11.11□□□□□ -0.63
CCNT1-201ENST00000261900 ACIN1Q9UKV3 1341 aaKnown RBP11.11□□□□□ -0.63
CCNT1-201ENST00000261900 DCAF8L1A6NGE4 600 aa11.1□□□□□ -0.63
CCNT1-201ENST00000261900 CFDP1Q9UEE9 299 aaPredicted RBP11.1□□□□□ -0.63
CCNT1-201ENST00000261900 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
CCNT1-201ENST00000261900 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
CCNT1-201ENST00000261900 ISY1Q9ULR0 285 aaKnown RBP11.09□□□□□ -0.63
CCNT1-201ENST00000261900 NCLP19338 710 aaKnown RBP11.08□□□□□ -0.64
CCNT1-201ENST00000261900 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCNT1-201ENST00000261900 MAPK8IP3Q9UPT6 1336 aa11.07□□□□□ -0.64
CCNT1-201ENST00000261900 CSB-PGBD3P0DP91 1061 aa11.05□□□□□ -0.64
CCNT1-201ENST00000261900 CLSTN1O94985 981 aa11.04□□□□□ -0.64
CCNT1-201ENST00000261900 OS9Q13438 667 aaPredicted RBP11.04□□□□□ -0.64
CCNT1-201ENST00000261900 KNSTRNQ9Y448 316 aa11.04□□□□□ -0.64
CCNT1-201ENST00000261900 RSF1Q96T23 1441 aaPredicted RBP11.04□□□□□ -0.64
CCNT1-201ENST00000261900 RRP7BPQ9NSQ0 103 aa11.03□□□□□ -0.64
CCNT1-201ENST00000261900 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
CCNT1-201ENST00000261900 CASC1Q6TDU7 716 aa11.03□□□□□ -0.64
CCNT1-201ENST00000261900 FGD1P98174 961 aa11.02□□□□□ -0.64
CCNT1-201ENST00000261900 MRS2Q9HD23 443 aa11.02□□□□□ -0.65
CCNT1-201ENST00000261900 KANK1Q14678 1352 aa11.01□□□□□ -0.65
CCNT1-201ENST00000261900 LAS1LQ9Y4W2 734 aaKnown RBP11.01□□□□□ -0.65
CCNT1-201ENST00000261900 CCDC136Q96JN2 1154 aa11□□□□□ -0.65
CCNT1-201ENST00000261900 G3V3G9 751 aa11□□□□□ -0.65
CCNT1-201ENST00000261900 SOX12O15370 315 aa11□□□□□ -0.65
CCNT1-201ENST00000261900 DCAF8Q5TAQ9 597 aa11□□□□□ -0.65
CCNT1-201ENST00000261900 DDX10Q13206 875 aaKnown RBP10.99□□□□□ -0.65
CCNT1-201ENST00000261900 PNNQ9H307 717 aaKnown RBP10.99□□□□□ -0.65
CCNT1-201ENST00000261900 CHMP4BQ9H444 224 aaKnown RBP10.98□□□□□ -0.65
CCNT1-201ENST00000261900 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
CCNT1-201ENST00000261900 PAK3O75914 559 aaPredicted RBP10.97□□□□□ -0.65
CCNT1-201ENST00000261900 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
CCNT1-201ENST00000261900 PHF23Q9BUL5 403 aaPredicted RBP10.97□□□□□ -0.65
CCNT1-201ENST00000261900 KCNJ4P48050 445 aa10.96□□□□□ -0.65
CCNT1-201ENST00000261900 GGT6Q6P531 493 aa10.96□□□□□ -0.65
CCNT1-201ENST00000261900 ZNF330Q9Y3S2 320 aaPredicted RBP10.96□□□□□ -0.65
CCNT1-201ENST00000261900 EID1Q9Y6B2 187 aa10.96□□□□□ -0.66
CCNT1-201ENST00000261900 GOLGA6L22H0YM25 854 aa10.95□□□□□ -0.66
CCNT1-201ENST00000261900 SRPK2P78362 688 aaKnown RBP10.95□□□□□ -0.66
CCNT1-201ENST00000261900 U2SURPO15042 1029 aaKnown RBP10.94□□□□□ -0.66
CCNT1-201ENST00000261900 KRI1Q8N9T8 703 aaKnown RBP10.94□□□□□ -0.66
CCNT1-201ENST00000261900 NAP1L2Q9ULW6 460 aaPredicted RBP10.94□□□□□ -0.66
CCNT1-201ENST00000261900 RTF1Q92541 710 aaKnown RBP10.93□□□□□ -0.66
CCNT1-201ENST00000261900 NEUROD2Q15784 382 aa10.93□□□□□ -0.66
CCNT1-201ENST00000261900 GTF2E1P29083 439 aaPredicted RBP10.91□□□□□ -0.66
CCNT1-201ENST00000261900 CARD11Q9BXL7 1154 aa10.91□□□□□ -0.66
CCNT1-201ENST00000261900 CHMP4AQ9BY43 222 aa10.91□□□□□ -0.66
CCNT1-201ENST00000261900 MEX3CQ5U5Q3 659 aaKnown RBP10.91□□□□□ -0.66
CCNT1-201ENST00000261900 MSH5O43196 834 aa10.89□□□□□ -0.67
CCNT1-201ENST00000261900 TNNT2P45379 298 aaPredicted RBP10.89□□□□□ -0.67
CCNT1-201ENST00000261900 BECN1Q14457 450 aa10.89□□□□□ -0.67
CCNT1-201ENST00000261900 MS4A1P11836 297 aa10.89□□□□□ -0.67
CCNT1-201ENST00000261900 PRM3Q9NNZ6 103 aa10.88□□□□□ -0.67
CCNT1-201ENST00000261900 HDGFL2Q7Z4V5 671 aaPredicted RBP10.87□□□□□ -0.67
CCNT1-201ENST00000261900 FKBP8Q14318 412 aa10.87□□□□□ -0.67
CCNT1-201ENST00000261900 SAFB2Q14151 953 aaKnown RBP eCLIP10.87□□□□□ -0.67
CCNT1-201ENST00000261900 ANP32EQ9BTT0 268 aa10.87□□□□□ -0.67
CCNT1-201ENST00000261900 FOXD1Q16676 465 aa10.87□□□□□ -0.67
CCNT1-201ENST00000261900 GTF3C3Q9Y5Q9 886 aa10.86□□□□□ -0.67
CCNT1-201ENST00000261900 STK26Q9P289 416 aa10.85□□□□□ -0.67
CCNT1-201ENST00000261900 CCNB3Q8WWL7 1395 aa10.85□□□□□ -0.67
CCNT1-201ENST00000261900 NRDCO43847 1150 aa10.85□□□□□ -0.67
CCNT1-201ENST00000261900 TAF7LQ5H9L4 462 aa10.84□□□□□ -0.67
CCNT1-201ENST00000261900 RB1CC1Q8TDY2 1594 aa10.84□□□□□ -0.67
CCNT1-201ENST00000261900 EFCAB2Q5VUJ9 269 aa10.83□□□□□ -0.68
CCNT1-201ENST00000261900 GOLGA6L6A8MZA4 724 aa10.83□□□□□ -0.68
CCNT1-201ENST00000261900 GORABQ5T7V8 394 aa10.83□□□□□ -0.68
CCNT1-201ENST00000261900 TRIM44Q96DX7 344 aaPredicted RBP10.83□□□□□ -0.68
CCNT1-201ENST00000261900 NGDNQ8NEJ9 315 aaKnown RBP10.82□□□□□ -0.68
CCNT1-201ENST00000261900 KLHL34Q8N239 644 aa10.82□□□□□ -0.68
CCNT1-201ENST00000261900 CLIP1P30622 1438 aa10.81□□□□□ -0.68
CCNT1-201ENST00000261900 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
CCNT1-201ENST00000261900 FRAT2O75474 233 aaPredicted RBP10.81□□□□□ -0.68
CCNT1-201ENST00000261900 PTMAP06454 111 aaKnown RBP10.81□□□□□ -0.68
CCNT1-201ENST00000261900 GNL2Q13823 731 aaKnown RBP10.81□□□□□ -0.68
CCNT1-201ENST00000261900 GOLGA6L4A6NEF3 574 aa10.81□□□□□ -0.68
CCNT1-201ENST00000261900 TMF1P82094 1093 aa10.81□□□□□ -0.68
CCNT1-201ENST00000261900 HDAC5Q9UQL6 1122 aa10.81□□□□□ -0.68
CCNT1-201ENST00000261900 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
CCNT1-201ENST00000261900 CARMIL2Q6F5E8 1435 aa10.8□□□□□ -0.68
CCNT1-201ENST00000261900 EVA1CP58658 441 aa10.8□□□□□ -0.68
CCNT1-201ENST00000261900 BAZ1BQ9UIG0 1483 aaKnown RBP10.8□□□□□ -0.68
CCNT1-201ENST00000261900 ZCCHC6Q5VYS8 1495 aaKnown RBP10.79□□□□□ -0.68
CCNT1-201ENST00000261900 MORC1Q86VD1 984 aa10.79□□□□□ -0.68
CCNT1-201ENST00000261900 FRAT1Q92837 279 aaPredicted RBP10.79□□□□□ -0.68
CCNT1-201ENST00000261900 L1TD1Q5T7N2 865 aaKnown RBP10.78□□□□□ -0.68
CCNT1-201ENST00000261900 CHAF1AQ13111 956 aaPredicted RBP10.78□□□□□ -0.68
CCNT1-201ENST00000261900 CHMP3Q9Y3E7 222 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms