RNA–Protein interactions for RNA: ENST00000257189.4

DSG3-201, Transcript of desmoglein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSG3, Length 5,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSG3-201ENST00000257189 PPM1GO15355 546 aaPredicted RBP10.94□□□□□ -0.66
DSG3-201ENST00000257189 NBR1Q14596 966 aa10.94□□□□□ -0.66
DSG3-201ENST00000257189 GOLGA6L22H0YM25 854 aa10.93□□□□□ -0.66
DSG3-201ENST00000257189 CCDC136Q96JN2 1154 aa10.91□□□□□ -0.66
DSG3-201ENST00000257189 P3H3Q8IVL6 736 aa10.9□□□□□ -0.66
DSG3-201ENST00000257189 SLC24A1O60721 1099 aa10.88□□□□□ -0.67
DSG3-201ENST00000257189 PLEKHD1A6NEE1 506 aa10.87□□□□□ -0.67
DSG3-201ENST00000257189 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
DSG3-201ENST00000257189 MLECQ14165 292 aa10.86□□□□□ -0.67
DSG3-201ENST00000257189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.86□□□□□ -0.67
DSG3-201ENST00000257189 HNRNPUQ00839 825 aaKnown RBP eCLIP10.83□□□□□ -0.68
DSG3-201ENST00000257189 MEX3CQ5U5Q3 659 aaKnown RBP10.83□□□□□ -0.68
DSG3-201ENST00000257189 NAP1L5Q96NT1 182 aaPredicted RBP10.83□□□□□ -0.68
DSG3-201ENST00000257189 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
DSG3-201ENST00000257189 PTMAP06454 111 aaKnown RBP10.81□□□□□ -0.68
DSG3-201ENST00000257189 TSPY4P0CV99 314 aa10.79□□□□□ -0.68
DSG3-201ENST00000257189 TSPY10P0CW01 314 aa10.79□□□□□ -0.68
DSG3-201ENST00000257189 ZNF326Q5BKZ1 582 aaKnown RBP10.79□□□□□ -0.68
DSG3-201ENST00000257189 DNTTIP2Q5QJE6 756 aaKnown RBP10.79□□□□□ -0.68
DSG3-201ENST00000257189 GOLGA6L6A8MZA4 724 aa10.77□□□□□ -0.68
DSG3-201ENST00000257189 L1TD1Q5T7N2 865 aaKnown RBP10.77□□□□□ -0.69
DSG3-201ENST00000257189 NRDCO43847 1150 aa10.77□□□□□ -0.69
DSG3-201ENST00000257189 MYH16Q9H6N6 1097 aa10.76□□□□□ -0.69
DSG3-201ENST00000257189 BCL11AQ9H165 835 aa10.76□□□□□ -0.69
DSG3-201ENST00000257189 ZRSR1Q15695 479 aaKnown RBP10.75□□□□□ -0.69
DSG3-201ENST00000257189 CHAF1AQ13111 956 aaPredicted RBP10.75□□□□□ -0.69
DSG3-201ENST00000257189 ARXQ96QS3 562 aa10.74□□□□□ -0.69
DSG3-201ENST00000257189 TONSLQ96HA7 1378 aa10.74□□□□□ -0.69
DSG3-201ENST00000257189 DCAF1Q9Y4B6 1507 aa10.71□□□□□ -0.69
DSG3-201ENST00000257189 ZBTB7CA1YPR0 619 aa10.7□□□□□ -0.7
DSG3-201ENST00000257189 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
DSG3-201ENST00000257189 FAM69CQ0P6D2 419 aa10.7□□□□□ -0.7
DSG3-201ENST00000257189 TMC1Q8TDI8 760 aa10.7□□□□□ -0.7
DSG3-201ENST00000257189 NOP58Q9Y2X3 529 aaKnown RBP10.7□□□□□ -0.7
DSG3-201ENST00000257189 LMOD2Q6P5Q4 547 aa10.68□□□□□ -0.7
DSG3-201ENST00000257189 CCDC9Q9Y3X0 531 aaKnown RBP10.68□□□□□ -0.7
DSG3-201ENST00000257189 PTMSP20962 102 aa10.68□□□□□ -0.7
DSG3-201ENST00000257189 FAM9BQ8IZU0 186 aa10.68□□□□□ -0.7
DSG3-201ENST00000257189 WDR43Q15061 677 aaKnown RBP eCLIP10.68□□□□□ -0.7
DSG3-201ENST00000257189 CASC1Q6TDU7 716 aa10.67□□□□□ -0.7
DSG3-201ENST00000257189 SF3B2Q13435 895 aaKnown RBP10.66□□□□□ -0.7
DSG3-201ENST00000257189 SMARCA2P51531 1590 aa10.66□□□□□ -0.7
DSG3-201ENST00000257189 MSNP26038 577 aaKnown RBP10.66□□□□□ -0.7
DSG3-201ENST00000257189 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
DSG3-201ENST00000257189 DDX10Q13206 875 aaKnown RBP10.63□□□□□ -0.71
DSG3-201ENST00000257189 CEP164Q9UPV0 1460 aa10.62□□□□□ -0.71
DSG3-201ENST00000257189 TNNT3P45378 269 aaPredicted RBP10.62□□□□□ -0.71
DSG3-201ENST00000257189 KLHL34Q8N239 644 aa10.62□□□□□ -0.71
DSG3-201ENST00000257189 EID1Q9Y6B2 187 aa10.62□□□□□ -0.71
DSG3-201ENST00000257189 PPP4R2Q9NY27 417 aa10.62□□□□□ -0.71
DSG3-201ENST00000257189 USP35Q9P2H5 1018 aa10.61□□□□□ -0.71
DSG3-201ENST00000257189 NPHP1O15259 732 aa10.61□□□□□ -0.71
DSG3-201ENST00000257189 CFAP44Q96MT7 982 aa10.61□□□□□ -0.71
DSG3-201ENST00000257189 CHMP4BQ9H444 224 aaKnown RBP10.61□□□□□ -0.71
DSG3-201ENST00000257189 ZCCHC6Q5VYS8 1495 aaKnown RBP10.6□□□□□ -0.71
DSG3-201ENST00000257189 DEKP35659 375 aaKnown RBP10.6□□□□□ -0.71
DSG3-201ENST00000257189 DNAJC5BQ9UF47 199 aa10.56□□□□□ -0.72
DSG3-201ENST00000257189 PNNQ9H307 717 aaKnown RBP10.56□□□□□ -0.72
DSG3-201ENST00000257189 RTN4Q9NQC3 1192 aaKnown RBP10.56□□□□□ -0.72
DSG3-201ENST00000257189 MS4A1P11836 297 aa10.55□□□□□ -0.72
DSG3-201ENST00000257189 CSRNP3Q8WYN3 585 aa10.55□□□□□ -0.72
DSG3-201ENST00000257189 DMRT2Q9Y5R5 561 aa10.54□□□□□ -0.72
DSG3-201ENST00000257189 CADPSQ9ULU8 1353 aa10.54□□□□□ -0.72
DSG3-201ENST00000257189 RSPH6AQ9H0K4 717 aa10.54□□□□□ -0.72
DSG3-201ENST00000257189 KIAA2012Q0VF49 1180 aa10.53□□□□□ -0.72
DSG3-201ENST00000257189 MIER1Q8N108 512 aa10.53□□□□□ -0.72
DSG3-201ENST00000257189 PIP4K2BP78356 416 aa10.52□□□□□ -0.72
DSG3-201ENST00000257189 KANK1Q14678 1352 aa10.52□□□□□ -0.73
DSG3-201ENST00000257189 BAZ1AQ9NRL2 1556 aaPredicted RBP10.52□□□□□ -0.73
DSG3-201ENST00000257189 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
DSG3-201ENST00000257189 HSP90AB1P08238 724 aaKnown RBP10.51□□□□□ -0.73
DSG3-201ENST00000257189 SOGA1O94964 1423 aa10.51□□□□□ -0.73
DSG3-201ENST00000257189 CALRP27797 417 aaKnown RBP10.5□□□□□ -0.73
DSG3-201ENST00000257189 HSCBQ8IWL3 235 aa10.5□□□□□ -0.73
DSG3-201ENST00000257189 LAS1LQ9Y4W2 734 aaKnown RBP10.5□□□□□ -0.73
DSG3-201ENST00000257189 MTUS2Q5JR59 1369 aa10.5□□□□□ -0.73
DSG3-201ENST00000257189 EFCAB2Q5VUJ9 269 aa10.5□□□□□ -0.73
DSG3-201ENST00000257189 WRNQ14191 1432 aaPredicted RBP eCLIP10.5□□□□□ -0.73
DSG3-201ENST00000257189 SETQ01105 290 aaPredicted RBP10.49□□□□□ -0.73
DSG3-201ENST00000257189 EIF4G2P78344 907 aaKnown RBP eCLIP10.49□□□□□ -0.73
DSG3-201ENST00000257189 GGT6Q6P531 493 aa10.49□□□□□ -0.73
DSG3-201ENST00000257189 PPP1R1BQ9UD71 204 aaPredicted RBP10.49□□□□□ -0.73
DSG3-201ENST00000257189 CFDP1Q9UEE9 299 aaPredicted RBP10.48□□□□□ -0.73
DSG3-201ENST00000257189 GOLGA6L1Q8N7Z2 621 aa10.48□□□□□ -0.73
DSG3-201ENST00000257189 ABCC8Q09428 1581 aa10.48□□□□□ -0.73
DSG3-201ENST00000257189 PLCB2Q00722 1185 aa10.47□□□□□ -0.73
DSG3-201ENST00000257189 KIF27Q86VH2 1401 aa10.47□□□□□ -0.73
DSG3-201ENST00000257189 GBP4Q96PP9 640 aa10.47□□□□□ -0.73
DSG3-201ENST00000257189 GOLGA6L4A6NEF3 574 aa10.47□□□□□ -0.73
DSG3-201ENST00000257189 SALL2Q9Y467 1007 aaPredicted RBP10.47□□□□□ -0.73
DSG3-201ENST00000257189 CLIP1P30622 1438 aa10.46□□□□□ -0.73
DSG3-201ENST00000257189 IRX6P78412 446 aaPredicted RBP10.46□□□□□ -0.73
DSG3-201ENST00000257189 HSP90AA2PQ14568 343 aaPredicted RBP10.46□□□□□ -0.74
DSG3-201ENST00000257189 SYAP1Q96A49 352 aaPredicted RBP10.46□□□□□ -0.74
DSG3-201ENST00000257189 TMX4Q9H1E5 349 aaPredicted RBP10.45□□□□□ -0.74
DSG3-201ENST00000257189 CFAP53Q96M91 514 aa10.45□□□□□ -0.74
DSG3-201ENST00000257189 TDRD9Q8NDG6 1382 aaKnown RBP10.45□□□□□ -0.74
DSG3-201ENST00000257189 CDCA8Q53HL2 280 aa10.45□□□□□ -0.74
DSG3-201ENST00000257189 JPH4Q96JJ6 628 aa10.44□□□□□ -0.74
DSG3-201ENST00000257189 SUPT16HQ9Y5B9 1047 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 255.4 ms