RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 ARID4BQ4LE39 1312 aaPredicted RBP9.71□□□□□ -0.86
SSR1-201ENST00000244763 A0A0G2JS52 829 aa9.71□□□□□ -0.86
SSR1-201ENST00000244763 HDGFP51858 240 aaKnown RBP9.71□□□□□ -0.86
SSR1-201ENST00000244763 DDX10Q13206 875 aaKnown RBP9.71□□□□□ -0.86
SSR1-201ENST00000244763 CCDC136Q96JN2 1154 aa9.7□□□□□ -0.86
SSR1-201ENST00000244763 KCNH8Q96L42 1107 aa9.69□□□□□ -0.86
SSR1-201ENST00000244763 DCAF1Q9Y4B6 1507 aa9.69□□□□□ -0.86
SSR1-201ENST00000244763 ANP32EQ9BTT0 268 aa9.68□□□□□ -0.86
SSR1-201ENST00000244763 FKBP8Q14318 412 aa9.68□□□□□ -0.86
SSR1-201ENST00000244763 PNNQ9H307 717 aaKnown RBP9.68□□□□□ -0.86
SSR1-201ENST00000244763 SALL2Q9Y467 1007 aaPredicted RBP9.67□□□□□ -0.86
SSR1-201ENST00000244763 MRS2Q9HD23 443 aa9.67□□□□□ -0.86
SSR1-201ENST00000244763 ERCC6Q03468 1493 aa9.66□□□□□ -0.86
SSR1-201ENST00000244763 CHMP4BQ9H444 224 aaKnown RBP9.66□□□□□ -0.86
SSR1-201ENST00000244763 NCLP19338 710 aaKnown RBP9.66□□□□□ -0.86
SSR1-201ENST00000244763 CLIP1P30622 1438 aa9.65□□□□□ -0.86
SSR1-201ENST00000244763 GOLGA3Q08378 1498 aa9.65□□□□□ -0.86
SSR1-201ENST00000244763 KIF27Q86VH2 1401 aa9.65□□□□□ -0.86
SSR1-201ENST00000244763 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.86
SSR1-201ENST00000244763 CFDP1Q9UEE9 299 aaPredicted RBP9.65□□□□□ -0.86
SSR1-201ENST00000244763 ZBTB7CA1YPR0 619 aa9.64□□□□□ -0.87
SSR1-201ENST00000244763 CASC1Q6TDU7 716 aa9.64□□□□□ -0.87
SSR1-201ENST00000244763 BECN1Q14457 450 aa9.64□□□□□ -0.87
SSR1-201ENST00000244763 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
SSR1-201ENST00000244763 KNSTRNQ9Y448 316 aa9.63□□□□□ -0.87
SSR1-201ENST00000244763 DDRGK1Q96HY6 314 aa9.62□□□□□ -0.87
SSR1-201ENST00000244763 GOLGA6L22H0YM25 854 aa9.62□□□□□ -0.87
SSR1-201ENST00000244763 MS4A1P11836 297 aa9.61□□□□□ -0.87
SSR1-201ENST00000244763 GLIPR1L2Q4G1C9 344 aa9.6□□□□□ -0.87
SSR1-201ENST00000244763 ZRSR1Q15695 479 aaKnown RBP9.6□□□□□ -0.87
SSR1-201ENST00000244763 KANK1Q14678 1352 aa9.6□□□□□ -0.87
SSR1-201ENST00000244763 RRP7BPQ9NSQ0 103 aa9.6□□□□□ -0.87
SSR1-201ENST00000244763 POGKQ9P215 609 aa9.59□□□□□ -0.87
SSR1-201ENST00000244763 MAPK8IP3Q9UPT6 1336 aa9.59□□□□□ -0.87
SSR1-201ENST00000244763 NPHP1O15259 732 aa9.58□□□□□ -0.88
SSR1-201ENST00000244763 RGL3Q3MIN7 710 aa9.58□□□□□ -0.88
SSR1-201ENST00000244763 FHAD1B1AJZ9 1412 aa9.57□□□□□ -0.88
SSR1-201ENST00000244763 WRNQ14191 1432 aaPredicted RBP eCLIP9.57□□□□□ -0.88
SSR1-201ENST00000244763 ARXQ96QS3 562 aa9.57□□□□□ -0.88
SSR1-201ENST00000244763 CEP164Q9UPV0 1460 aa9.57□□□□□ -0.88
SSR1-201ENST00000244763 FTSJ3Q8IY81 847 aaKnown RBP9.56□□□□□ -0.88
SSR1-201ENST00000244763 CARD11Q9BXL7 1154 aa9.55□□□□□ -0.88
SSR1-201ENST00000244763 CFAP44Q96MT7 982 aa9.55□□□□□ -0.88
SSR1-201ENST00000244763 PPM1GO15355 546 aaPredicted RBP9.54□□□□□ -0.88
SSR1-201ENST00000244763 BAZ1AQ9NRL2 1556 aaPredicted RBP9.53□□□□□ -0.88
SSR1-201ENST00000244763 TRHP20396 242 aaPredicted RBP9.53□□□□□ -0.88
SSR1-201ENST00000244763 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
SSR1-201ENST00000244763 TRIM44Q96DX7 344 aaPredicted RBP9.53□□□□□ -0.88
SSR1-201ENST00000244763 PLEKHG5O94827 1062 aa9.53□□□□□ -0.88
SSR1-201ENST00000244763 LMOD2Q6P5Q4 547 aa9.52□□□□□ -0.88
SSR1-201ENST00000244763 GOLGA2Q08379 1002 aa9.52□□□□□ -0.89
SSR1-201ENST00000244763 CCNB3Q8WWL7 1395 aa9.5□□□□□ -0.89
SSR1-201ENST00000244763 TMF1P82094 1093 aa9.5□□□□□ -0.89
SSR1-201ENST00000244763 CARMIL2Q6F5E8 1435 aa9.5□□□□□ -0.89
SSR1-201ENST00000244763 CEP162Q5TB80 1403 aa9.49□□□□□ -0.89
SSR1-201ENST00000244763 TNIKQ9UKE5 1360 aa9.49□□□□□ -0.89
SSR1-201ENST00000244763 TIMELESSQ9UNS1 1208 aa9.48□□□□□ -0.89
SSR1-201ENST00000244763 LAS1LQ9Y4W2 734 aaKnown RBP9.47□□□□□ -0.89
SSR1-201ENST00000244763 OS9Q13438 667 aaPredicted RBP9.47□□□□□ -0.89
SSR1-201ENST00000244763 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.9
SSR1-201ENST00000244763 NRDCO43847 1150 aa9.46□□□□□ -0.9
SSR1-201ENST00000244763 PDS5BQ9NTI5 1447 aa9.45□□□□□ -0.9
SSR1-201ENST00000244763 FGD1P98174 961 aa9.45□□□□□ -0.9
SSR1-201ENST00000244763 RTF1Q92541 710 aaKnown RBP9.45□□□□□ -0.9
SSR1-201ENST00000244763 CALD1Q05682 793 aaKnown RBP9.44□□□□□ -0.9
SSR1-201ENST00000244763 TMX4Q9H1E5 349 aaPredicted RBP9.44□□□□□ -0.9
SSR1-201ENST00000244763 KCNJ4P48050 445 aa9.44□□□□□ -0.9
SSR1-201ENST00000244763 U2SURPO15042 1029 aaKnown RBP9.43□□□□□ -0.9
SSR1-201ENST00000244763 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
SSR1-201ENST00000244763 MCCP23508 829 aa9.43□□□□□ -0.9
SSR1-201ENST00000244763 HDGFL2Q7Z4V5 671 aaPredicted RBP9.43□□□□□ -0.9
SSR1-201ENST00000244763 SENP3Q9H4L4 574 aaPredicted RBP9.42□□□□□ -0.9
SSR1-201ENST00000244763 HDAC5Q9UQL6 1122 aa9.42□□□□□ -0.9
SSR1-201ENST00000244763 CARMIL1Q5VZK9 1371 aa9.42□□□□□ -0.9
SSR1-201ENST00000244763 EIF4G1Q04637 1599 aaKnown RBP9.42□□□□□ -0.9
SSR1-201ENST00000244763 PTMAP06454 111 aaKnown RBP9.41□□□□□ -0.9
SSR1-201ENST00000244763 RSPH4AQ5TD94 716 aa9.41□□□□□ -0.9
SSR1-201ENST00000244763 L1TD1Q5T7N2 865 aaKnown RBP9.41□□□□□ -0.9
SSR1-201ENST00000244763 SMARCA2P51531 1590 aa9.41□□□□□ -0.9
SSR1-201ENST00000244763 NBR1Q14596 966 aa9.4□□□□□ -0.9
SSR1-201ENST00000244763 HIRIP3Q9BW71 556 aaPredicted RBP9.4□□□□□ -0.9
SSR1-201ENST00000244763 DCAF11Q8TEB1 546 aa9.4□□□□□ -0.91
SSR1-201ENST00000244763 NEUROD2Q15784 382 aa9.4□□□□□ -0.91
SSR1-201ENST00000244763 EFCAB2Q5VUJ9 269 aa9.4□□□□□ -0.91
SSR1-201ENST00000244763 TNNT2P45379 298 aaPredicted RBP9.39□□□□□ -0.91
SSR1-201ENST00000244763 CUX2O14529 1486 aa9.39□□□□□ -0.91
SSR1-201ENST00000244763 IPO8O15397 1037 aaKnown RBP9.39□□□□□ -0.91
SSR1-201ENST00000244763 MLECQ14165 292 aa9.38□□□□□ -0.91
SSR1-201ENST00000244763 EID1Q9Y6B2 187 aa9.38□□□□□ -0.91
SSR1-201ENST00000244763 MORC1Q86VD1 984 aa9.38□□□□□ -0.91
SSR1-201ENST00000244763 HSP90AB1P08238 724 aaKnown RBP9.37□□□□□ -0.91
SSR1-201ENST00000244763 DNTTIP2Q5QJE6 756 aaKnown RBP9.37□□□□□ -0.91
SSR1-201ENST00000244763 MIER1Q8N108 512 aa9.37□□□□□ -0.91
SSR1-201ENST00000244763 GGT6Q6P531 493 aa9.37□□□□□ -0.91
SSR1-201ENST00000244763 FRAT1Q92837 279 aaPredicted RBP9.37□□□□□ -0.91
SSR1-201ENST00000244763 GOLGA6L4A6NEF3 574 aa9.37□□□□□ -0.91
SSR1-201ENST00000244763 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
SSR1-201ENST00000244763 ARHGAP35Q9NRY4 1499 aa9.36□□□□□ -0.91
SSR1-201ENST00000244763 FMN1Q68DA7 1419 aa9.35□□□□□ -0.91
SSR1-201ENST00000244763 PPP4R2Q9NY27 417 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms