RNA–Protein interactions for RNA: ENST00000238831.8

YIPF4-201, Transcript of Yip1 domain family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YIPF4, Length 11,949 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-201ENST00000238831 CHIC2Q9UKJ5 165 aa11.49□□□□□ -0.57
YIPF4-201ENST00000238831 DDX10Q13206 875 aaKnown RBP11.49□□□□□ -0.57
YIPF4-201ENST00000238831 TRIM44Q96DX7 344 aaPredicted RBP11.48□□□□□ -0.57
YIPF4-201ENST00000238831 ARID4BQ4LE39 1312 aaPredicted RBP11.48□□□□□ -0.57
YIPF4-201ENST00000238831 PTMAP06454 111 aaKnown RBP11.47□□□□□ -0.57
YIPF4-201ENST00000238831 LMOD2Q6P5Q4 547 aa11.46□□□□□ -0.58
YIPF4-201ENST00000238831 IRX6P78412 446 aaPredicted RBP11.46□□□□□ -0.58
YIPF4-201ENST00000238831 PPM1GO15355 546 aaPredicted RBP11.45□□□□□ -0.58
YIPF4-201ENST00000238831 DNTTIP2Q5QJE6 756 aaKnown RBP11.45□□□□□ -0.58
YIPF4-201ENST00000238831 ACIN1Q9UKV3 1341 aaKnown RBP11.42□□□□□ -0.58
YIPF4-201ENST00000238831 NAP1L2Q9ULW6 460 aaPredicted RBP11.41□□□□□ -0.58
YIPF4-201ENST00000238831 LAS1LQ9Y4W2 734 aaKnown RBP11.41□□□□□ -0.58
YIPF4-201ENST00000238831 GOLGA6L22H0YM25 854 aa11.41□□□□□ -0.58
YIPF4-201ENST00000238831 BECN1Q14457 450 aa11.41□□□□□ -0.58
YIPF4-201ENST00000238831 CASC1Q6TDU7 716 aa11.41□□□□□ -0.58
YIPF4-201ENST00000238831 TNNT2P45379 298 aaPredicted RBP11.41□□□□□ -0.58
YIPF4-201ENST00000238831 GOLGA2Q08379 1002 aa11.41□□□□□ -0.58
YIPF4-201ENST00000238831 MRS2Q9HD23 443 aa11.4□□□□□ -0.58
YIPF4-201ENST00000238831 ISY1Q9ULR0 285 aaKnown RBP11.39□□□□□ -0.59
YIPF4-201ENST00000238831 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
YIPF4-201ENST00000238831 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
YIPF4-201ENST00000238831 TSPY4P0CV99 314 aa11.37□□□□□ -0.59
YIPF4-201ENST00000238831 TSPY10P0CW01 314 aa11.37□□□□□ -0.59
YIPF4-201ENST00000238831 FGD1P98174 961 aa11.37□□□□□ -0.59
YIPF4-201ENST00000238831 PRM3Q9NNZ6 103 aa11.36□□□□□ -0.59
YIPF4-201ENST00000238831 KCNH8Q96L42 1107 aa11.36□□□□□ -0.59
YIPF4-201ENST00000238831 FTSJ3Q8IY81 847 aaKnown RBP11.35□□□□□ -0.59
YIPF4-201ENST00000238831 OS9Q13438 667 aaPredicted RBP11.35□□□□□ -0.59
YIPF4-201ENST00000238831 HIRIP3Q9BW71 556 aaPredicted RBP11.34□□□□□ -0.59
YIPF4-201ENST00000238831 DDRGK1Q96HY6 314 aa11.33□□□□□ -0.6
YIPF4-201ENST00000238831 KCNJ4P48050 445 aa11.32□□□□□ -0.6
YIPF4-201ENST00000238831 RGL3Q3MIN7 710 aa11.31□□□□□ -0.6
YIPF4-201ENST00000238831 GOLGA6L6A8MZA4 724 aa11.3□□□□□ -0.6
YIPF4-201ENST00000238831 CSRNP3Q8WYN3 585 aa11.3□□□□□ -0.6
YIPF4-201ENST00000238831 CFAP53Q96M91 514 aa11.3□□□□□ -0.6
YIPF4-201ENST00000238831 NEUROD2Q15784 382 aa11.3□□□□□ -0.6
YIPF4-201ENST00000238831 CHMP7Q8WUX9 453 aaPredicted RBP11.29□□□□□ -0.6
YIPF4-201ENST00000238831 ANP32EQ9BTT0 268 aa11.28□□□□□ -0.6
YIPF4-201ENST00000238831 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.6
YIPF4-201ENST00000238831 NAP1L5Q96NT1 182 aaPredicted RBP11.26□□□□□ -0.61
YIPF4-201ENST00000238831 MAPK8IP3Q9UPT6 1336 aa11.25□□□□□ -0.61
YIPF4-201ENST00000238831 SOX12O15370 315 aa11.24□□□□□ -0.61
YIPF4-201ENST00000238831 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
YIPF4-201ENST00000238831 RRP7BPQ9NSQ0 103 aa11.24□□□□□ -0.61
YIPF4-201ENST00000238831 POGKQ9P215 609 aa11.24□□□□□ -0.61
YIPF4-201ENST00000238831 MTUS2Q5JR59 1369 aa11.23□□□□□ -0.61
YIPF4-201ENST00000238831 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
YIPF4-201ENST00000238831 TRHP20396 242 aaPredicted RBP11.22□□□□□ -0.61
YIPF4-201ENST00000238831 PDE4CQ08493 712 aa11.22□□□□□ -0.61
YIPF4-201ENST00000238831 NRDCO43847 1150 aa11.22□□□□□ -0.61
YIPF4-201ENST00000238831 GOLGA6L4A6NEF3 574 aa11.22□□□□□ -0.61
YIPF4-201ENST00000238831 FRAT1Q92837 279 aaPredicted RBP11.21□□□□□ -0.61
YIPF4-201ENST00000238831 GNL2Q13823 731 aaKnown RBP11.21□□□□□ -0.62
YIPF4-201ENST00000238831 DRC7Q8IY82 874 aa11.21□□□□□ -0.62
YIPF4-201ENST00000238831 ERICH6BQ5W0A0 696 aa11.2□□□□□ -0.62
YIPF4-201ENST00000238831 NOC3LQ8WTT2 800 aaKnown RBP11.2□□□□□ -0.62
YIPF4-201ENST00000238831 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
YIPF4-201ENST00000238831 U2SURPO15042 1029 aaKnown RBP11.19□□□□□ -0.62
YIPF4-201ENST00000238831 PNNQ9H307 717 aaKnown RBP11.19□□□□□ -0.62
YIPF4-201ENST00000238831 RGS3P49796 1198 aa11.19□□□□□ -0.62
YIPF4-201ENST00000238831 KIAA2012Q0VF49 1180 aa11.18□□□□□ -0.62
YIPF4-201ENST00000238831 RTN4Q9NQC3 1192 aaKnown RBP11.18□□□□□ -0.62
YIPF4-201ENST00000238831 ANO8Q9HCE9 1232 aaPredicted RBP11.17□□□□□ -0.62
YIPF4-201ENST00000238831 ZNF330Q9Y3S2 320 aaPredicted RBP11.17□□□□□ -0.62
YIPF4-201ENST00000238831 NUDCQ9Y266 331 aa11.17□□□□□ -0.62
YIPF4-201ENST00000238831 TMX4Q9H1E5 349 aaPredicted RBP11.15□□□□□ -0.62
YIPF4-201ENST00000238831 CHAF1AQ13111 956 aaPredicted RBP11.15□□□□□ -0.62
YIPF4-201ENST00000238831 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.15□□□□□ -0.62
YIPF4-201ENST00000238831 MLECQ14165 292 aa11.14□□□□□ -0.63
YIPF4-201ENST00000238831 CDCA8Q53HL2 280 aa11.14□□□□□ -0.63
YIPF4-201ENST00000238831 L1TD1Q5T7N2 865 aaKnown RBP11.13□□□□□ -0.63
YIPF4-201ENST00000238831 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
YIPF4-201ENST00000238831 KRI1Q8N9T8 703 aaKnown RBP11.13□□□□□ -0.63
YIPF4-201ENST00000238831 SCRIBQ14160 1630 aa11.12□□□□□ -0.63
YIPF4-201ENST00000238831 CC2D1BQ5T0F9 858 aaKnown RBP11.12□□□□□ -0.63
YIPF4-201ENST00000238831 CCDC9Q9Y3X0 531 aaKnown RBP11.12□□□□□ -0.63
YIPF4-201ENST00000238831 PLEKHD1A6NEE1 506 aa11.11□□□□□ -0.63
YIPF4-201ENST00000238831 G3V3G9 751 aa11.11□□□□□ -0.63
YIPF4-201ENST00000238831 DCAF8Q5TAQ9 597 aa11.11□□□□□ -0.63
YIPF4-201ENST00000238831 APBB1O00213 710 aa11.1□□□□□ -0.63
YIPF4-201ENST00000238831 MCCP23508 829 aa11.1□□□□□ -0.63
YIPF4-201ENST00000238831 CARD11Q9BXL7 1154 aa11.09□□□□□ -0.63
YIPF4-201ENST00000238831 FBXO3Q9UK99 471 aa11.09□□□□□ -0.63
YIPF4-201ENST00000238831 PAK3O75914 559 aaPredicted RBP11.09□□□□□ -0.63
YIPF4-201ENST00000238831 A0A0U1RQG5 324 aaPredicted RBP11.09□□□□□ -0.63
YIPF4-201ENST00000238831 CHMP4BQ9H444 224 aaKnown RBP11.08□□□□□ -0.64
YIPF4-201ENST00000238831 HSCBQ8IWL3 235 aa11.08□□□□□ -0.64
YIPF4-201ENST00000238831 SUPT16HQ9Y5B9 1047 aaKnown RBP11.08□□□□□ -0.64
YIPF4-201ENST00000238831 MIER1Q8N108 512 aa11.08□□□□□ -0.64
YIPF4-201ENST00000238831 SAFB2Q14151 953 aaKnown RBP eCLIP11.08□□□□□ -0.64
YIPF4-201ENST00000238831 RTF1Q92541 710 aaKnown RBP11.07□□□□□ -0.64
YIPF4-201ENST00000238831 MSNP26038 577 aaKnown RBP11.07□□□□□ -0.64
YIPF4-201ENST00000238831 CSB-PGBD3P0DP91 1061 aa11.07□□□□□ -0.64
YIPF4-201ENST00000238831 SRPK2P78362 688 aaKnown RBP11.06□□□□□ -0.64
YIPF4-201ENST00000238831 ARID3AQ99856 593 aa11.06□□□□□ -0.64
YIPF4-201ENST00000238831 CHMP3Q9Y3E7 222 aa11.06□□□□□ -0.64
YIPF4-201ENST00000238831 VPS53Q5VIR6 699 aa11.05□□□□□ -0.64
YIPF4-201ENST00000238831 CREBRFQ8IUR6 639 aa11.05□□□□□ -0.64
YIPF4-201ENST00000238831 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
YIPF4-201ENST00000238831 MS4A1P11836 297 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms