RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 KCNH8Q96L42 1107 aa14.76□□□□□ -0.05
KNOP1-201ENST00000219837 MTUS2Q5JR59 1369 aa14.73□□□□□ -0.05
KNOP1-201ENST00000219837 TULP1O00294 542 aaPredicted RBP14.72□□□□□ -0.05
KNOP1-201ENST00000219837 MRS2Q9HD23 443 aa14.71□□□□□ -0.05
KNOP1-201ENST00000219837 IRX6P78412 446 aaPredicted RBP14.7□□□□□ -0.06
KNOP1-201ENST00000219837 HIRIP3Q9BW71 556 aaPredicted RBP14.68□□□□□ -0.06
KNOP1-201ENST00000219837 RRP7BPQ9NSQ0 103 aa14.68□□□□□ -0.06
KNOP1-201ENST00000219837 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
KNOP1-201ENST00000219837 TPRNQ4KMQ1 711 aa14.64□□□□□ -0.07
KNOP1-201ENST00000219837 PPM1GO15355 546 aaPredicted RBP14.64□□□□□ -0.07
KNOP1-201ENST00000219837 NPHP1O15259 732 aa14.62□□□□□ -0.07
KNOP1-201ENST00000219837 LAS1LQ9Y4W2 734 aaKnown RBP14.61□□□□□ -0.07
KNOP1-201ENST00000219837 RGL3Q3MIN7 710 aa14.61□□□□□ -0.07
KNOP1-201ENST00000219837 CASC1Q6TDU7 716 aa14.6□□□□□ -0.07
KNOP1-201ENST00000219837 TAOK2Q9UL54 1235 aa14.59□□□□□ -0.07
KNOP1-201ENST00000219837 GLIPR1L2Q4G1C9 344 aa14.58□□□□□ -0.07
KNOP1-201ENST00000219837 LMOD2Q6P5Q4 547 aa14.58□□□□□ -0.08
KNOP1-201ENST00000219837 CFAP53Q96M91 514 aa14.57□□□□□ -0.08
KNOP1-201ENST00000219837 EIF4G2P78344 907 aaKnown RBP eCLIP14.57□□□□□ -0.08
KNOP1-201ENST00000219837 BECN1Q14457 450 aa14.57□□□□□ -0.08
KNOP1-201ENST00000219837 SENP3-EIF4A1A0A087X0R7 540 aa14.56□□□□□ -0.08
KNOP1-201ENST00000219837 PLEKHD1A6NEE1 506 aa14.56□□□□□ -0.08
KNOP1-201ENST00000219837 DDRGK1Q96HY6 314 aa14.55□□□□□ -0.08
KNOP1-201ENST00000219837 RSF1Q96T23 1441 aaPredicted RBP14.55□□□□□ -0.08
KNOP1-201ENST00000219837 ZRSR1Q15695 479 aaKnown RBP14.54□□□□□ -0.08
KNOP1-201ENST00000219837 FTSJ3Q8IY81 847 aaKnown RBP14.53□□□□□ -0.08
KNOP1-201ENST00000219837 ZCCHC6Q5VYS8 1495 aaKnown RBP14.53□□□□□ -0.08
KNOP1-201ENST00000219837 ERCC6Q03468 1493 aa14.53□□□□□ -0.08
KNOP1-201ENST00000219837 DCAF1Q9Y4B6 1507 aa14.52□□□□□ -0.08
KNOP1-201ENST00000219837 RB1CC1Q8TDY2 1594 aa14.52□□□□□ -0.09
KNOP1-201ENST00000219837 CLIP1P30622 1438 aa14.51□□□□□ -0.09
KNOP1-201ENST00000219837 KNSTRNQ9Y448 316 aa14.51□□□□□ -0.09
KNOP1-201ENST00000219837 GOLGA6L22H0YM25 854 aa14.5□□□□□ -0.09
KNOP1-201ENST00000219837 POGKQ9P215 609 aa14.5□□□□□ -0.09
KNOP1-201ENST00000219837 TRIM44Q96DX7 344 aaPredicted RBP14.49□□□□□ -0.09
KNOP1-201ENST00000219837 MAPK8IP3Q9UPT6 1336 aa14.49□□□□□ -0.09
KNOP1-201ENST00000219837 NEUROD2Q15784 382 aa14.47□□□□□ -0.09
KNOP1-201ENST00000219837 CCDC180Q9P1Z9 1646 aa14.47□□□□□ -0.09
KNOP1-201ENST00000219837 PTMAP06454 111 aaKnown RBP14.47□□□□□ -0.09
KNOP1-201ENST00000219837 TNNT2P45379 298 aaPredicted RBP14.46□□□□□ -0.09
KNOP1-201ENST00000219837 OS9Q13438 667 aaPredicted RBP14.46□□□□□ -0.09
KNOP1-201ENST00000219837 CDCA8Q53HL2 280 aa14.46□□□□□ -0.09
KNOP1-201ENST00000219837 MIER1Q8N108 512 aa14.45□□□□□ -0.1
KNOP1-201ENST00000219837 CARD11Q9BXL7 1154 aa14.44□□□□□ -0.1
KNOP1-201ENST00000219837 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
KNOP1-201ENST00000219837 TRHP20396 242 aaPredicted RBP14.44□□□□□ -0.1
KNOP1-201ENST00000219837 CFDP1Q9UEE9 299 aaPredicted RBP14.44□□□□□ -0.1
KNOP1-201ENST00000219837 GOLGA3Q08378 1498 aa14.44□□□□□ -0.1
KNOP1-201ENST00000219837 GOLGA2Q08379 1002 aa14.44□□□□□ -0.1
KNOP1-201ENST00000219837 NAP1L2Q9ULW6 460 aaPredicted RBP14.43□□□□□ -0.1
KNOP1-201ENST00000219837 CC2D1BQ5T0F9 858 aaKnown RBP14.42□□□□□ -0.1
KNOP1-201ENST00000219837 NUDCQ9Y266 331 aa14.4□□□□□ -0.1
KNOP1-201ENST00000219837 DNTTIP2Q5QJE6 756 aaKnown RBP14.4□□□□□ -0.11
KNOP1-201ENST00000219837 CLSTN1O94985 981 aa14.39□□□□□ -0.11
KNOP1-201ENST00000219837 FRAT1Q92837 279 aaPredicted RBP14.39□□□□□ -0.11
KNOP1-201ENST00000219837 BAZ1BQ9UIG0 1483 aaKnown RBP14.39□□□□□ -0.11
KNOP1-201ENST00000219837 U2SURPO15042 1029 aaKnown RBP14.38□□□□□ -0.11
KNOP1-201ENST00000219837 MLECQ14165 292 aa14.38□□□□□ -0.11
KNOP1-201ENST00000219837 SOX12O15370 315 aa14.37□□□□□ -0.11
KNOP1-201ENST00000219837 FGD1P98174 961 aa14.36□□□□□ -0.11
KNOP1-201ENST00000219837 NCBP3Q53F19 620 aaKnown RBP14.36□□□□□ -0.11
KNOP1-201ENST00000219837 ANP32EQ9BTT0 268 aa14.36□□□□□ -0.11
KNOP1-201ENST00000219837 HSP90AB1P08238 724 aaKnown RBP14.35□□□□□ -0.11
KNOP1-201ENST00000219837 PLCB2Q00722 1185 aa14.35□□□□□ -0.11
KNOP1-201ENST00000219837 KANK1Q14678 1352 aa14.34□□□□□ -0.11
KNOP1-201ENST00000219837 KCNJ4P48050 445 aa14.34□□□□□ -0.11
KNOP1-201ENST00000219837 GOLGA6L6A8MZA4 724 aa14.34□□□□□ -0.11
KNOP1-201ENST00000219837 CEP162Q5TB80 1403 aa14.34□□□□□ -0.11
KNOP1-201ENST00000219837 PNNQ9H307 717 aaKnown RBP14.34□□□□□ -0.11
KNOP1-201ENST00000219837 ISY1Q9ULR0 285 aaKnown RBP14.32□□□□□ -0.12
KNOP1-201ENST00000219837 RGS3P49796 1198 aa14.3□□□□□ -0.12
KNOP1-201ENST00000219837 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
KNOP1-201ENST00000219837 SRPK2P78362 688 aaKnown RBP14.29□□□□□ -0.12
KNOP1-201ENST00000219837 KIF27Q86VH2 1401 aa14.29□□□□□ -0.12
KNOP1-201ENST00000219837 SAFB2Q14151 953 aaKnown RBP eCLIP14.28□□□□□ -0.12
KNOP1-201ENST00000219837 CHMP4BQ9H444 224 aaKnown RBP14.27□□□□□ -0.12
KNOP1-201ENST00000219837 CCNB3Q8WWL7 1395 aa14.27□□□□□ -0.12
KNOP1-201ENST00000219837 HDGFP51858 240 aaKnown RBP14.27□□□□□ -0.13
KNOP1-201ENST00000219837 WRNQ14191 1432 aaPredicted RBP eCLIP14.26□□□□□ -0.13
KNOP1-201ENST00000219837 TMF1P82094 1093 aa14.25□□□□□ -0.13
KNOP1-201ENST00000219837 PAK3O75914 559 aaPredicted RBP14.24□□□□□ -0.13
KNOP1-201ENST00000219837 MS4A1P11836 297 aa14.23□□□□□ -0.13
KNOP1-201ENST00000219837 RTF1Q92541 710 aaKnown RBP14.23□□□□□ -0.13
KNOP1-201ENST00000219837 DCAF11Q8TEB1 546 aa14.23□□□□□ -0.13
KNOP1-201ENST00000219837 STK26Q9P289 416 aa14.22□□□□□ -0.13
KNOP1-201ENST00000219837 EEA1Q15075 1411 aa14.22□□□□□ -0.13
KNOP1-201ENST00000219837 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
KNOP1-201ENST00000219837 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
KNOP1-201ENST00000219837 NAP1L5Q96NT1 182 aaPredicted RBP14.22□□□□□ -0.13
KNOP1-201ENST00000219837 MORC1Q86VD1 984 aa14.21□□□□□ -0.13
KNOP1-201ENST00000219837 MCCP23508 829 aa14.2□□□□□ -0.14
KNOP1-201ENST00000219837 GNL2Q13823 731 aaKnown RBP14.2□□□□□ -0.14
KNOP1-201ENST00000219837 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
KNOP1-201ENST00000219837 GOLGA6L4A6NEF3 574 aa14.2□□□□□ -0.14
KNOP1-201ENST00000219837 ZNF330Q9Y3S2 320 aaPredicted RBP14.19□□□□□ -0.14
KNOP1-201ENST00000219837 HSCBQ8IWL3 235 aa14.19□□□□□ -0.14
KNOP1-201ENST00000219837 CSB-PGBD3P0DP91 1061 aa14.19□□□□□ -0.14
KNOP1-201ENST00000219837 CCDC9Q9Y3X0 531 aaKnown RBP14.18□□□□□ -0.14
KNOP1-201ENST00000219837 DRC7Q8IY82 874 aa14.17□□□□□ -0.14
KNOP1-201ENST00000219837 MYO15BQ96JP2 1530 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms