RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 UTP20O75691 2785 aaKnown RBP15.08■□□□□ 0.01
PMS1-222ENST00000639501 CD28P10747 220 aa15.07■□□□□ 0
PMS1-222ENST00000639501 DOPEY1Q5JWR5 2465 aa15.06■□□□□ 0
PMS1-222ENST00000639501 ZNF843Q8N446 348 aa15.06■□□□□ 0
PMS1-222ENST00000639501 NDUFA12Q9UI09 145 aa15.06■□□□□ 0
PMS1-222ENST00000639501 MRPS36P82909 103 aaKnown RBP15.05■□□□□ 0
PMS1-222ENST00000639501 SHISA2Q6UWI4 295 aa15.05■□□□□ 0
PMS1-222ENST00000639501 USMG5Q96IX5 58 aa15.05■□□□□ 0
PMS1-222ENST00000639501 CRYBG3Q68DQ2 2970 aa15.05■□□□□ -0
PMS1-222ENST00000639501 IGHV3-73A0A0B4J1V6 119 aa15.05■□□□□ -0
PMS1-222ENST00000639501 SPINK13Q1W4C9 94 aa15.05■□□□□ -0
PMS1-222ENST00000639501 SPANXDQ9BXN6 97 aa15.05■□□□□ -0
PMS1-222ENST00000639501 SPANXCQ9NY87 97 aa15.05■□□□□ -0
PMS1-222ENST00000639501 KMT2BQ9UMN6 2715 aaPredicted RBP15.05■□□□□ -0
PMS1-222ENST00000639501 SORL1Q92673 2214 aa15.04■□□□□ -0
PMS1-222ENST00000639501 H3BT86 120 aa15.04■□□□□ -0
PMS1-222ENST00000639501 PROK1P58294 105 aa15.04■□□□□ -0
PMS1-222ENST00000639501 BLCAPP62952 87 aa15.04■□□□□ -0
PMS1-222ENST00000639501 HERV-K104P63124 156 aa15.04■□□□□ -0
PMS1-222ENST00000639501 MIAQ16674 131 aa15.04■□□□□ -0
PMS1-222ENST00000639501 FAM208BQ5VWN6 2430 aa15.04■□□□□ -0
PMS1-222ENST00000639501 LRRK2Q5S007 2527 aa15.04■□□□□ -0
PMS1-222ENST00000639501 DAND5Q8N907 189 aa15.04■□□□□ -0
PMS1-222ENST00000639501 IGHV1-58A0A0C4DH39 117 aa15.03■□□□□ -0
PMS1-222ENST00000639501 LST1O00453 97 aa15.03■□□□□ -0
PMS1-222ENST00000639501 CHCHD5Q9BSY4 110 aa15.03■□□□□ -0
PMS1-222ENST00000639501 Q9UF83 564 aa15.03■□□□□ -0
PMS1-222ENST00000639501 DOPEY2Q9Y3R5 2298 aa15.03■□□□□ -0
PMS1-222ENST00000639501 ID1P41134 155 aa15.03■□□□□ -0
PMS1-222ENST00000639501 C3orf56Q8N813 242 aa15.03■□□□□ -0
PMS1-222ENST00000639501 TMEM61Q8N0U2 210 aa15.02■□□□□ -0
PMS1-222ENST00000639501 FAM110AQ9BQ89 295 aa15.02■□□□□ -0
PMS1-222ENST00000639501 UBR5O95071 2799 aaPredicted RBP15.02■□□□□ -0
PMS1-222ENST00000639501 IGHV1OR15-1A0A075B7D0 117 aa15.02□□□□□ -0.01
PMS1-222ENST00000639501 IGHG2P01859 326 aa15.02□□□□□ -0.01
PMS1-222ENST00000639501 BRI3O95415 125 aa15.01□□□□□ -0.01
PMS1-222ENST00000639501 MEIG1Q5JSS6 88 aa15.01□□□□□ -0.01
PMS1-222ENST00000639501 VSIG2Q96IQ7 327 aa15.01□□□□□ -0.01
PMS1-222ENST00000639501 TRGV11A0A075B6L2 103 aa15□□□□□ -0.01
PMS1-222ENST00000639501 C19orf84I3L1E1 186 aa15□□□□□ -0.01
PMS1-222ENST00000639501 COX6CP09669 75 aa14.99□□□□□ -0.01
PMS1-222ENST00000639501 IGHV4-38-2P0DP08 117 aa14.99□□□□□ -0.01
PMS1-222ENST00000639501 DEFB121Q5J5C9 76 aa14.99□□□□□ -0.01
PMS1-222ENST00000639501 PYGO1Q9Y3Y4 419 aa14.99□□□□□ -0.01
PMS1-222ENST00000639501 H3BUA1 57 aa14.98□□□□□ -0.01
PMS1-222ENST00000639501 H3BUX3 64 aa14.98□□□□□ -0.01
PMS1-222ENST00000639501 TMEM95Q3KNT9 176 aa14.98□□□□□ -0.01
PMS1-222ENST00000639501 FAM240AA0A1B0GVK7 77 aa14.98□□□□□ -0.01
PMS1-222ENST00000639501 IGLV1-40P01703 118 aa14.97□□□□□ -0.01
PMS1-222ENST00000639501 MRPL23Q16540 153 aaKnown RBP14.97□□□□□ -0.01
PMS1-222ENST00000639501 RBMY1A1P0DJD3 496 aaKnown RBP14.96□□□□□ -0.01
PMS1-222ENST00000639501 RBMY1CP0DJD4 496 aa14.96□□□□□ -0.01
PMS1-222ENST00000639501 RBMY1FQ15415 496 aaKnown RBP14.96□□□□□ -0.01
PMS1-222ENST00000639501 MAP1AP78559 2803 aaPredicted RBP14.96□□□□□ -0.01
PMS1-222ENST00000639501 NACAE9PAV3 2078 aa14.96□□□□□ -0.01
PMS1-222ENST00000639501 PRM2P04554 102 aa14.96□□□□□ -0.02
PMS1-222ENST00000639501 HTN1P15515 57 aa14.95□□□□□ -0.02
PMS1-222ENST00000639501 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.95□□□□□ -0.02
PMS1-222ENST00000639501 TRBV7-7A0A0K0K1E9 115 aa14.95□□□□□ -0.02
PMS1-222ENST00000639501 IGKV2-29A2NJV5 120 aaPredicted RBP14.95□□□□□ -0.02
PMS1-222ENST00000639501 KNCNA6PVL3 124 aa14.95□□□□□ -0.02
PMS1-222ENST00000639501 CITED2Q99967 270 aaPredicted RBP14.95□□□□□ -0.02
PMS1-222ENST00000639501 TINCRA0A1B0GVN0 87 aa14.94□□□□□ -0.02
PMS1-222ENST00000639501 K7EMT4 169 aa14.94□□□□□ -0.02
PMS1-222ENST00000639501 C10orf99Q6UWK7 81 aa14.94□□□□□ -0.02
PMS1-222ENST00000639501 A6NDX4 124 aa14.93□□□□□ -0.02
PMS1-222ENST00000639501 CHCHD7Q9BUK0 85 aa14.93□□□□□ -0.02
PMS1-222ENST00000639501 UBE2D4Q9Y2X8 147 aa14.93□□□□□ -0.02
PMS1-222ENST00000639501 CENPEQ02224 2701 aa14.93□□□□□ -0.02
PMS1-222ENST00000639501 Q6ZSN1 163 aa14.93□□□□□ -0.02
PMS1-222ENST00000639501 LINC01587Q99440 93 aa14.93□□□□□ -0.02
PMS1-222ENST00000639501 SMCR5Q8TEV8 140 aa14.92□□□□□ -0.02
PMS1-222ENST00000639501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.92□□□□□ -0.022e-12■■■■■ 48.7
PMS1-222ENST00000639501 CFHR3Q02985 330 aa14.92□□□□□ -0.02
PMS1-222ENST00000639501 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.92□□□□□ -0.02
PMS1-222ENST00000639501 DUX5Q96PT3 197 aa14.92□□□□□ -0.02
PMS1-222ENST00000639501 CSMD2Q7Z408 3487 aa14.92□□□□□ -0.02
PMS1-222ENST00000639501 FAM236AA0A1B0GUQ0 79 aa14.91□□□□□ -0.02
PMS1-222ENST00000639501 FAM236BA0A1B0GV22 79 aa14.91□□□□□ -0.02
PMS1-222ENST00000639501 CDKN2A-AS1Q9UH64 79 aa14.91□□□□□ -0.02
PMS1-222ENST00000639501 K7EQG2 157 aa14.91□□□□□ -0.02
PMS1-222ENST00000639501 SNRPD3P62318 126 aaKnown RBP14.9□□□□□ -0.02
PMS1-222ENST00000639501 LINC00467Q9BRT7 94 aa14.9□□□□□ -0.02
PMS1-222ENST00000639501 IGHV3-38A0A0C4DH36 116 aa14.89□□□□□ -0.03
PMS1-222ENST00000639501 YAE1D1Q9NRH1 226 aa14.89□□□□□ -0.03
PMS1-222ENST00000639501 A0A0U1RRA0 63 aa14.89□□□□□ -0.03
PMS1-222ENST00000639501 TNFRSF18Q9Y5U5 241 aa14.89□□□□□ -0.03
PMS1-222ENST00000639501 TMEM101Q96IK0 257 aa14.88□□□□□ -0.03
PMS1-222ENST00000639501 IGHV4-61A0A0C4DH41 118 aa14.87□□□□□ -0.03
PMS1-222ENST00000639501 Q8N2B8 174 aa14.87□□□□□ -0.03
PMS1-222ENST00000639501 ZNF625Q96I27 306 aaPredicted RBP14.87□□□□□ -0.03
PMS1-222ENST00000639501 EDA2RQ9HAV5 297 aa14.87□□□□□ -0.03
PMS1-222ENST00000639501 CELSR2Q9HCU4 2923 aa14.87□□□□□ -0.03
PMS1-222ENST00000639501 SPG11Q96JI7 2443 aa14.86□□□□□ -0.03
PMS1-222ENST00000639501 TIMM17BO60830 172 aa14.86□□□□□ -0.03
PMS1-222ENST00000639501 TENM4Q6N022 2769 aa14.86□□□□□ -0.03
PMS1-222ENST00000639501 CFAP161Q6P656 301 aa14.86□□□□□ -0.03
PMS1-222ENST00000639501 SPANXA1Q9NS26 97 aa14.86□□□□□ -0.03
PMS1-222ENST00000639501 NDUFA1O15239 70 aa14.85□□□□□ -0.03
PMS1-222ENST00000639501 COX6A2Q02221 97 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms