RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 A8MUN3 132 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 Q6Q795 121 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 KRTAP11-1Q8IUC1 163 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 EXOC3-AS1Q8N2X6 119 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 C15orf56Q8N910 161 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 OR5A1Q8NGJ0 315 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 MRPL30Q8TCC3 161 aaKnown RBP1.92□□□□□ -2.1
CCDC7-213ENST00000639290 WDR61Q9GZS3 305 aaKnown RBP1.92□□□□□ -2.1
CCDC7-213ENST00000639290 VCXQ9H320 206 aa1.92□□□□□ -2.1
CCDC7-213ENST00000639290 TRGV2A0A075B6R0 118 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 MCRIP1C9JLW8 97 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 IFNGP01579 166 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 SAA1P0DJI8 122 aaPredicted RBP1.91□□□□□ -2.1
CCDC7-213ENST00000639290 SMIM17P0DL12 118 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 RBM11P57052 281 aaKnown RBP1.91□□□□□ -2.1
CCDC7-213ENST00000639290 TNFAIP8L3Q5GJ75 292 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 OR10G2Q8NGC3 310 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 OR8D4Q8NGM9 314 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 TSKUQ8WUA8 353 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 RAB2BQ8WUD1 216 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 HSPB8Q9UJY1 196 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 CYSLTR1Q9Y271 337 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 TRBV20OR9-2A0A075B6H5 130 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 IGLV10-54A0A075B6I4 117 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 IGKV2D-30A0A075B6S6 120 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 TLX1NBP0CAT3 122 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 OPRK1P41145 380 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 PIGPP57054 158 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 DEFA3P59666 94 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 SNRPGP62308 76 aaKnown RBP1.91□□□□□ -2.1
CCDC7-213ENST00000639290 LUZP6Q538Z0 58 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 C9orf129Q5T035 196 aaKnown RBP1.91□□□□□ -2.1
CCDC7-213ENST00000639290 ZNF322Q6U7Q0 402 aaPredicted RBP1.91□□□□□ -2.1
CCDC7-213ENST00000639290 ADAT3Q96EY9 351 aaPredicted RBP1.91□□□□□ -2.1
CCDC7-213ENST00000639290 IMUPQ9GZP8 106 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 RPRMQ9NS64 109 aa1.91□□□□□ -2.1
CCDC7-213ENST00000639290 IGKV2D-24A0A075B6R9 120 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 TRAV9-1A0A075B6T8 112 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 IGLC7A0M8Q6 106 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 K7EIM0 57 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 HLA-DQA1P01909 254 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 IGLV7-43P04211 117 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 RPL7P18124 248 aaKnown RBP1.9□□□□□ -2.1
CCDC7-213ENST00000639290 S100PP25815 95 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 CANT1Q8WVQ1 401 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 TOMM6Q96B49 74 aa1.9□□□□□ -2.1
CCDC7-213ENST00000639290 IGKV1-9A0A0C4DH69 117 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 A0A1B0GW54 56 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 DUXBA0A1W2PPF3 345 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 DLEU1O43261 78 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 IGHV3-30P01768 117 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 IGHV3-33P01772 117 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 HTR1AP08908 422 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 UBBP0CG47 229 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 IGHV3-30-3P0DP02 117 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 IGHV3-30-5P0DP03 117 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 ATP6V0CP27449 155 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 GDF5OSQ5U4N7 250 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 IDO2Q6ZQW0 420 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 NTM-AS1Q6ZSK4 140 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 OR10D4PQ8NGN7 298 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 SHANK2-AS3Q9BTD1 123 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 NKX6-2Q9C056 277 aaPredicted RBP1.9□□□□□ -2.11
CCDC7-213ENST00000639290 LAMTOR2Q9Y2Q5 125 aa1.9□□□□□ -2.11
CCDC7-213ENST00000639290 SPINK4O60575 86 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 MT-ND6P03923 174 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 MT1FP04733 61 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 SRP19P09132 144 aaKnown RBP1.89□□□□□ -2.11
CCDC7-213ENST00000639290 TAS2R45P59539 299 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 RPS11P62280 158 aaKnown RBP eCLIP1.89□□□□□ -2.11
CCDC7-213ENST00000639290 C10orf55Q5SWW7 151 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 LYRM7Q5U5X0 104 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 FAM104BQ5XKR9 115 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 PRSS54Q6PEW0 395 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 LINC01551Q86U37 167 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 OR4K15Q8NH41 348 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 TYMSOSQ8TAI1 123 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 BET1LQ9NYM9 111 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 TMEM223A0PJW6 202 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 FAM168BA1KXE4 195 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 K7ERS5 55 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 PLA2G10O15496 165 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 PTHLHP12272 177 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 LPAR6P43657 344 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 CROCCP2Q86T23 111 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 H1FOOQ8IZA3 346 aaPredicted RBP1.89□□□□□ -2.11
CCDC7-213ENST00000639290 TMEM229BQ8NBD8 167 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 TSSK6Q9BXA6 273 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 FUT9Q9Y231 359 aa1.89□□□□□ -2.11
CCDC7-213ENST00000639290 TRBV6-6A0A0A6YYG2 114 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 IGHV3-21A0A0B4J1V1 117 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 TMEM235A6NFC5 223 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 CCDC160A6NGH7 325 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 GNG7O60262 68 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 IGKV3-20P01619 116 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 AKR1C2P52895 323 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 SYCNQ0VAF6 134 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 ZNF880Q6PDB4 577 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 EFCAB1Q9HAE3 211 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 IGKV1OR2-108A0A075B7D4 117 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms