RNA–Protein interactions for RNA: ENST00000638175.1

SCARB2-206, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-206ENST00000638175 COMMD7Q86VX2 200 aa4.27□□□□□ -1.73
SCARB2-206ENST00000638175 SAMD10Q9BYL1 202 aa4.27□□□□□ -1.73
SCARB2-206ENST00000638175 NAT8BQ9UHF3 227 aa4.27□□□□□ -1.73
SCARB2-206ENST00000638175 MRPS16Q9Y3D3 137 aaKnown RBP4.27□□□□□ -1.73
SCARB2-206ENST00000638175 KIF25-AS1Q9Y6Z4 181 aa4.27□□□□□ -1.73
SCARB2-206ENST00000638175 TRBV7-3A0A075B6L6 115 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 SMIM27A0A1W2PRY6 76 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 TMEM218A2RU14 115 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 MT-ND4LP03901 98 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 ADCYAP1P18509 176 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 NTF3P20783 257 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 EVI2AP22794 236 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
SCARB2-206ENST00000638175 RPL36AP83881 106 aaKnown RBP4.26□□□□□ -1.73
SCARB2-206ENST00000638175 TTC32Q5I0X7 151 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 SMIM29Q86T20 159 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 C14orf178Q8N769 122 aaPredicted RBP4.26□□□□□ -1.73
SCARB2-206ENST00000638175 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.26□□□□□ -1.73
SCARB2-206ENST00000638175 ZNRF2Q8NHG8 242 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 FRZBQ92765 325 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 PGLYRP4Q96LB8 373 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 SEC11CQ9BY50 192 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 LINC00588Q9Y4M8 146 aa4.26□□□□□ -1.73
SCARB2-206ENST00000638175 A0A087WWC5 75 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 LOC100131303A0A0U1RQF7 123 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 A0A1B0GW15 77 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 F8W036 122 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 K7EP13 123 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 S100A8P05109 93 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 MGPP08493 103 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 LINC00315P59091 139 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 SSTP61278 116 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 RIGQ13278 110 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 ESRGQ1W209 222 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 LYPD5Q6UWN5 251 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 NUP35Q8NFH5 326 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 ATP6V0E2Q8NHE4 81 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 DNAJC30Q96LL9 226 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 GTSF1LQ9H1H1 148 aa4.25□□□□□ -1.73
SCARB2-206ENST00000638175 CARHSP1Q9Y2V2 147 aaKnown RBP4.25□□□□□ -1.73
SCARB2-206ENST00000638175 TRAV8-6A0A0B4J262 113 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 M0QY20 66 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 SIVA1O15304 175 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 UBE2D3P61077 147 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 UBE2D2P62837 147 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 TMEM97Q5BJF2 176 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 C10orf91Q5T1B1 145 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 LELP1Q5T871 98 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 RASL11AQ6T310 242 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 ATP5L2Q7Z4Y8 100 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 TMEM191AQ9H0A3 160 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 FRAS1Q86XX4 4008 aa4.24□□□□□ -1.73
SCARB2-206ENST00000638175 NBDYA0A0U1RRE5 68 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 HBBP68871 147 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 RHEBQ15382 184 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 NDUFA5Q16718 116 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 Q6ZR54 194 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 DAZ4Q86SG3 579 aaKnown RBP4.23□□□□□ -1.73
SCARB2-206ENST00000638175 IMMP2LQ96T52 175 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 Q9H8V8 135 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 DAZ3Q9NR90 486 aaKnown RBP4.23□□□□□ -1.73
SCARB2-206ENST00000638175 TMEM242Q9NWH2 141 aa4.23□□□□□ -1.73
SCARB2-206ENST00000638175 IGLV2-18A0A075B6J9 118 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 TRAV9-1A0A075B6T8 112 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 TRAV9-2A0A087WT02 112 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 IGHV3-38A0A0C4DH36 116 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 A0A1B0GXF2 115 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 PPP1R17O96001 155 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 DNAH10OSP0CZ25 163 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 KRTAP10-6P60371 365 aaPredicted RBP4.22□□□□□ -1.73
SCARB2-206ENST00000638175 PKIAP61925 76 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 LINC01556Q5JQF7 62 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 KRTAP5-11Q6L8G4 156 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 KCNIP4Q6PIL6 250 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 WFDC10BQ8IUB3 73 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 C10orf126Q8N4M7 172 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 GATD1Q8NB37 220 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 MRAP2Q96G30 205 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 CHCHD7Q9BUK0 85 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 NIT2Q9NQR4 276 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 Q9UF83 564 aa4.22□□□□□ -1.73
SCARB2-206ENST00000638175 TRBV6-8A0A0A6YYG3 113 aa4.21□□□□□ -1.74
SCARB2-206ENST00000638175 S100PP25815 95 aa4.21□□□□□ -1.74
SCARB2-206ENST00000638175 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.21□□□□□ -1.74
SCARB2-206ENST00000638175 MRPL54Q6P161 138 aaKnown RBP4.21□□□□□ -1.74
SCARB2-206ENST00000638175 AMN1Q8IY45 258 aa4.21□□□□□ -1.74
SCARB2-206ENST00000638175 SVBPQ8N300 66 aa4.21□□□□□ -1.74
SCARB2-206ENST00000638175 BTF3L4Q96K17 158 aa4.21□□□□□ -1.74
SCARB2-206ENST00000638175 TRBV25-1A0A075B6N4 114 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 TRAV26-2A0A0B4J265 109 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 TRBV6-5A0A0K0K1A5 114 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 C7orf77A4D0Y5 90 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 SNAPINO95295 136 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 NCR2O95944 276 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 TSHBP01222 138 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 PPBPP02775 128 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 RAB4AP20338 218 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 LAGE3Q14657 143 aa4.2□□□□□ -1.74
SCARB2-206ENST00000638175 IQCJQ1A5X6 159 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms