RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 LINC00694P0DN24 101 aa8.25□□□□□ -1.09
CLN6-223ENST00000637823 GYPEP15421 78 aa8.25□□□□□ -1.09
CLN6-223ENST00000637823 HTN3P15516 51 aa8.25□□□□□ -1.09
CLN6-223ENST00000637823 BTF3P20290 206 aaKnown RBP8.25□□□□□ -1.09
CLN6-223ENST00000637823 COTL1Q14019 142 aa8.25□□□□□ -1.09
CLN6-223ENST00000637823 TOMM6Q96B49 74 aa8.25□□□□□ -1.09
CLN6-223ENST00000637823 VSIG2Q96IQ7 327 aa8.25□□□□□ -1.09
CLN6-223ENST00000637823 IGHV3-38A0A0C4DH36 116 aa8.24□□□□□ -1.09
CLN6-223ENST00000637823 NANOS2P60321 138 aaKnown RBP8.24□□□□□ -1.09
CLN6-223ENST00000637823 C2orf66Q6UXQ4 117 aa8.24□□□□□ -1.09
CLN6-223ENST00000637823 DEFB104AQ8WTQ1 72 aa8.24□□□□□ -1.09
CLN6-223ENST00000637823 GTSF1LQ9H1H1 148 aa8.24□□□□□ -1.09
CLN6-223ENST00000637823 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
CLN6-223ENST00000637823 COL7A1Q02388 2944 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 TRAV26-1A0A087WT03 109 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 H3BNG1 76 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 ATP5LO75964 103 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 C3orf79P0CE67 100 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 Q6ZTC4 211 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 LINC00173Q6ZV60 143 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 SH2D6Q7Z4S9 175 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 C20orf203Q8NBC4 194 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 ATP6V0E2Q8NHE4 81 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 MAP1LC3CQ9BXW4 147 aa8.23□□□□□ -1.09
CLN6-223ENST00000637823 A0A0J9YY99 117 aa8.22□□□□□ -1.09
CLN6-223ENST00000637823 KRTDAPP60985 99 aa8.22□□□□□ -1.09
CLN6-223ENST00000637823 MRPL23Q16540 153 aaKnown RBP8.22□□□□□ -1.09
CLN6-223ENST00000637823 ERASQ7Z444 233 aa8.22□□□□□ -1.09
CLN6-223ENST00000637823 IFI27L1Q96BM0 104 aa8.22□□□□□ -1.09
CLN6-223ENST00000637823 SCGB3A1Q96QR1 104 aa8.22□□□□□ -1.09
CLN6-223ENST00000637823 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
CLN6-223ENST00000637823 DEFB131BA0A096LNP1 70 aa8.21□□□□□ -1.1
CLN6-223ENST00000637823 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.21□□□□□ -1.1
CLN6-223ENST00000637823 RPL39P62891 51 aaKnown RBP8.21□□□□□ -1.1
CLN6-223ENST00000637823 JOSD1Q15040 202 aaPredicted RBP8.21□□□□□ -1.1
CLN6-223ENST00000637823 NTM-AS1Q6ZSK4 140 aa8.21□□□□□ -1.1
CLN6-223ENST00000637823 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
CLN6-223ENST00000637823 TRAV10A0A0B4J240 114 aa8.2□□□□□ -1.1
CLN6-223ENST00000637823 SYS1-DBNDD2H3BUS1 97 aa8.2□□□□□ -1.1
CLN6-223ENST00000637823 PET117Q6UWS5 81 aa8.2□□□□□ -1.1
CLN6-223ENST00000637823 SPATA12Q7Z6I5 190 aa8.2□□□□□ -1.1
CLN6-223ENST00000637823 TMEM141Q96I45 108 aa8.2□□□□□ -1.1
CLN6-223ENST00000637823 TRBV25-1A0A075B6N4 114 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 IGIPA6NJ69 53 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 SCGB1D1O95968 90 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 SMAGPQ0VAQ4 97 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 TIMM17AQ99595 171 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 TMEM243Q9BU79 118 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 PYGO1Q9Y3Y4 419 aa8.19□□□□□ -1.1
CLN6-223ENST00000637823 MEGF8Q7Z7M0 2845 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 HUWE1Q7Z6Z7 4374 aaKnown RBP8.18□□□□□ -1.1
CLN6-223ENST00000637823 A0A096LPF7 62 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 TRBV6-8A0A0A6YYG3 113 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 H7C423 109 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 PRSS1P07477 247 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 NPSP0C0P6 89 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 PYY3Q5JQD4 70 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 Q6ZN92 141 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 TIMM21Q9BVV7 248 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 SPANXA1Q9NS26 97 aa8.18□□□□□ -1.1
CLN6-223ENST00000637823 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.17□□□□□ -1.1
CLN6-223ENST00000637823 C20orf202A1L168 122 aa8.17□□□□□ -1.1
CLN6-223ENST00000637823 IGKV2-29A2NJV5 120 aaPredicted RBP8.17□□□□□ -1.1
CLN6-223ENST00000637823 DNAH9Q9NYC9 4486 aa8.17□□□□□ -1.1
CLN6-223ENST00000637823 H0Y8G0 127 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 UBE2L6O14933 153 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 PAPPA-AS1Q5QFB9 102 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 LINC01545Q5VT33 79 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 LGALS9CQ6DKI2 356 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 MRPL52Q86TS9 123 aaKnown RBP8.16□□□□□ -1.1
CLN6-223ENST00000637823 Q8N976 141 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 UBE2D4Q9Y2X8 147 aa8.16□□□□□ -1.1
CLN6-223ENST00000637823 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.1
CLN6-223ENST00000637823 TIRAPP58753 221 aa8.15□□□□□ -1.1
CLN6-223ENST00000637823 DGAT2L7PQ6IED9 249 aa8.15□□□□□ -1.1
CLN6-223ENST00000637823 LINC00518Q8N0U6 118 aa8.15□□□□□ -1.1
CLN6-223ENST00000637823 BAALCQ8WXS3 180 aa8.15□□□□□ -1.1
CLN6-223ENST00000637823 CSDC2Q9Y534 153 aaKnown RBP8.15□□□□□ -1.1
CLN6-223ENST00000637823 IGLV4-3A0A075B6K6 122 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 A0A087WX48 190 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 FGF6P10767 208 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 MRPS36P82909 103 aaKnown RBP8.14□□□□□ -1.11
CLN6-223ENST00000637823 PMVKQ15126 192 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 LYPD5Q6UWN5 251 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 C15orf53Q8NAA6 179 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 OPRPNQ99935 248 aaPredicted RBP8.14□□□□□ -1.11
CLN6-223ENST00000637823 CHCHD5Q9BSY4 110 aa8.14□□□□□ -1.11
CLN6-223ENST00000637823 PRSS29PA6NIE9 313 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 ZNF25P17030 456 aaPredicted RBP8.13□□□□□ -1.11
CLN6-223ENST00000637823 GAGE6Q13070 117 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 ODF1Q14990 250 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 LELP1Q5T871 98 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 AMMECR1LQ6DCA0 310 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
CLN6-223ENST00000637823 FAM104AQ969W3 186 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 TMEM101Q96IK0 257 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 C12orf57Q99622 126 aa8.13□□□□□ -1.11
CLN6-223ENST00000637823 VCX2Q9H322 139 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms