RNA–Protein interactions for RNA: ENST00000637212.1

LINC00643-207, long intergenic non-protein coding RNA 643, humanhuman

BASIC

Gene LINC00643, Length 734 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-207ENST00000637212 CEMP1Q6PRD7 247 aaPredicted RBP9.31□□□□□ -0.92
LINC00643-207ENST00000637212 LINC01549A6NIU2 74 aa9.3□□□□□ -0.92
LINC00643-207ENST00000637212 LINC00310P59036 64 aa9.3□□□□□ -0.92
LINC00643-207ENST00000637212 TMA7Q9Y2S6 64 aaKnown RBP9.3□□□□□ -0.92
LINC00643-207ENST00000637212 NACAE9PAV3 2078 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 IGHV3-38A0A0C4DH36 116 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 NUPR2A6NF83 97 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 C5orf52A6NGY3 159 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 NUPR1O60356 82 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 HSBP1O75506 76 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 TCTAP57738 103 aa9.29□□□□□ -0.92
LINC00643-207ENST00000637212 KLK5Q9Y337 293 aaPredicted RBP9.29□□□□□ -0.92
LINC00643-207ENST00000637212 TRBV6-8A0A0A6YYG3 113 aa9.28□□□□□ -0.92
LINC00643-207ENST00000637212 IGLL5B9A064 214 aa9.28□□□□□ -0.92
LINC00643-207ENST00000637212 NUDT3O95989 172 aa9.28□□□□□ -0.92
LINC00643-207ENST00000637212 SNRPEP62304 92 aaKnown RBP9.28□□□□□ -0.92
LINC00643-207ENST00000637212 LYPD5Q6UWN5 251 aa9.28□□□□□ -0.92
LINC00643-207ENST00000637212 NTM-AS1Q6ZSK4 140 aa9.28□□□□□ -0.92
LINC00643-207ENST00000637212 PACRGQ96M98 296 aaPredicted RBP9.28□□□□□ -0.92
LINC00643-207ENST00000637212 IGHV1-24A0A0C4DH33 117 aa9.27□□□□□ -0.93
LINC00643-207ENST00000637212 H7C423 109 aa9.27□□□□□ -0.93
LINC00643-207ENST00000637212 AMTP48728 403 aa9.27□□□□□ -0.93
LINC00643-207ENST00000637212 TMEM18Q96B42 140 aa9.27□□□□□ -0.93
LINC00643-207ENST00000637212 TRBV25-1A0A075B6N4 114 aa9.26□□□□□ -0.93
LINC00643-207ENST00000637212 C20orf203Q8NBC4 194 aa9.26□□□□□ -0.93
LINC00643-207ENST00000637212 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
LINC00643-207ENST00000637212 CHCHD7Q9BUK0 85 aa9.26□□□□□ -0.93
LINC00643-207ENST00000637212 HBDP02042 147 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 SMAGPQ0VAQ4 97 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 LELP1Q5T871 98 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 HIST3H2BBQ8N257 126 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 TOMM6Q96B49 74 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 TMEM243Q9BU79 118 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 CYSLTR1Q9Y271 337 aa9.25□□□□□ -0.93
LINC00643-207ENST00000637212 BTF3P20290 206 aaKnown RBP9.24□□□□□ -0.93
LINC00643-207ENST00000637212 S100A2P29034 98 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 PDZD11Q5EBL8 140 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 C2orf66Q6UXQ4 117 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 FAM19A2Q8N3H0 131 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 MUC7Q8TAX7 377 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 DEFB104AQ8WTQ1 72 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 COL7A1Q02388 2944 aa9.24□□□□□ -0.93
LINC00643-207ENST00000637212 A0A096LNJ9 63 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 NPSP0C0P6 89 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 PKIAP61925 76 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 PMCHL1Q16048 86 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 ESRGQ1W209 222 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 TIMM21Q9BVV7 248 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 APLNQ9ULZ1 77 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 PYGO1Q9Y3Y4 419 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 STAB2Q8WWQ8 2551 aa9.23□□□□□ -0.93
LINC00643-207ENST00000637212 TRAV8-6A0A0B4J262 113 aa9.22□□□□□ -0.93
LINC00643-207ENST00000637212 CCL18P55774 89 aa9.22□□□□□ -0.93
LINC00643-207ENST00000637212 ERASQ7Z444 233 aa9.22□□□□□ -0.93
LINC00643-207ENST00000637212 MRPL52Q86TS9 123 aaKnown RBP9.22□□□□□ -0.93
LINC00643-207ENST00000637212 TMEM141Q96I45 108 aa9.22□□□□□ -0.93
LINC00643-207ENST00000637212 HSPB8Q9UJY1 196 aa9.22□□□□□ -0.93
LINC00643-207ENST00000637212 CSDC2Q9Y534 153 aaKnown RBP9.22□□□□□ -0.93
LINC00643-207ENST00000637212 IGIPA6NJ69 53 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 UBE2L6O14933 153 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 ATP5LO75964 103 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 LEPROTL1O95214 131 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 HIST1H2BLQ99880 126 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 CHCHD5Q9BSY4 110 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 SPANXA1Q9NS26 97 aa9.21□□□□□ -0.94
LINC00643-207ENST00000637212 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.2□□□□□ -0.94
LINC00643-207ENST00000637212 A0A1B0GUV1 79 aa9.2□□□□□ -0.94
LINC00643-207ENST00000637212 IGKV2-29A2NJV5 120 aaPredicted RBP9.2□□□□□ -0.94
LINC00643-207ENST00000637212 RPL39P62891 51 aaKnown RBP9.2□□□□□ -0.94
LINC00643-207ENST00000637212 TIMM17AQ99595 171 aa9.2□□□□□ -0.94
LINC00643-207ENST00000637212 UBE2D4Q9Y2X8 147 aa9.2□□□□□ -0.94
LINC00643-207ENST00000637212 IFITM10A6NMD0 228 aa9.19□□□□□ -0.94
LINC00643-207ENST00000637212 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.19□□□□□ -0.94
LINC00643-207ENST00000637212 FGF6P10767 208 aa9.19□□□□□ -0.94
LINC00643-207ENST00000637212 FABP4P15090 132 aa9.19□□□□□ -0.94
LINC00643-207ENST00000637212 ZNF25P17030 456 aaPredicted RBP9.19□□□□□ -0.94
LINC00643-207ENST00000637212 PAPPA-AS1Q5QFB9 102 aa9.19□□□□□ -0.94
LINC00643-207ENST00000637212 MRPS16Q9Y3D3 137 aaKnown RBP9.19□□□□□ -0.94
LINC00643-207ENST00000637212 TMEM262E9PQX1 116 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 C3orf84H3BNL1 204 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 MRPS36P82909 103 aaKnown RBP9.18□□□□□ -0.94
LINC00643-207ENST00000637212 GAGE6Q13070 117 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 AMMECR1LQ6DCA0 310 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 DGAT2L7PQ6IED9 249 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 IFI27L1Q96BM0 104 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 TMEM101Q96IK0 257 aa9.18□□□□□ -0.94
LINC00643-207ENST00000637212 ZFAND6Q6FIF0 208 aa9.17□□□□□ -0.94
LINC00643-207ENST00000637212 UPK3BQ9BT76 320 aa9.17□□□□□ -0.94
LINC00643-207ENST00000637212 LINC00588Q9Y4M8 146 aa9.17□□□□□ -0.94
LINC00643-207ENST00000637212 Q6ZN92 141 aa9.16□□□□□ -0.94
LINC00643-207ENST00000637212 OR5A1Q8NGJ0 315 aa9.16□□□□□ -0.94
LINC00643-207ENST00000637212 MAP1LC3CQ9BXW4 147 aa9.16□□□□□ -0.94
LINC00643-207ENST00000637212 VCX2Q9H322 139 aa9.16□□□□□ -0.94
LINC00643-207ENST00000637212 CDC42SE2Q9NRR3 84 aa9.16□□□□□ -0.94
LINC00643-207ENST00000637212 A0A087WX48 190 aa9.15□□□□□ -0.94
LINC00643-207ENST00000637212 RBX1P62877 108 aa9.15□□□□□ -0.94
LINC00643-207ENST00000637212 LINC00173Q6ZV60 143 aa9.15□□□□□ -0.94
LINC00643-207ENST00000637212 SPATA12Q7Z6I5 190 aa9.15□□□□□ -0.94
LINC00643-207ENST00000637212 ZNF664Q8N3J9 261 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms