RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
SCN1A-214ENST00000637038 C19orf54Q5BKX5 351 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 DGAT2L7PQ6IED9 249 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 SH2D6Q7Z4S9 175 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 NFE4Q86UQ8 179 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 MDFICQ9P1T7 246 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 TRAV2A0A0B4J234 112 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 A0A0B4J2C4 111 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 LCE6AA0A183 80 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 LINC01548A6NM66 108 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 B5MCH6 92 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 ZNF561-AS1K7EIQ3 104 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 SNCGO76070 127 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 SPINK8P0C7L1 97 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 ZNF688P0C7X2 276 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 ZNF415Q09FC8 603 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 ZNF876PQ49A33 203 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 LINC00336Q6ZUF6 198 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 FAM19A4Q96LR4 140 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 TIMM21Q9BVV7 248 aa2.98□□□□□ -1.93
SCN1A-214ENST00000637038 PRRC2AP48634 2157 aaKnown RBP2.98□□□□□ -1.93
SCN1A-214ENST00000637038 F5H768 121 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 IGHV4-39P01824 125 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 CFC1BP0CG36 223 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 CFC1P0CG37 223 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 CFAP126Q5VTH2 177 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 PEMTQ9UBM1 199 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 IGHV3-16A0A0C4DH30 117 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 A0A0J9YX75 114 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 IGIPA6NJ69 53 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 F6UB75 175 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 ELANEP08246 267 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 ZFAND6Q6FIF0 208 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 KLK5Q9Y337 293 aaPredicted RBP2.97□□□□□ -1.93
SCN1A-214ENST00000637038 IGSF10Q6WRI0 2623 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 SLC25A20O43772 301 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 IGLV1-40P01703 118 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 PRSS2P07478 247 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 KPRPQ5T749 579 aaPredicted RBP2.97□□□□□ -1.93
SCN1A-214ENST00000637038 C20orf203Q8NBC4 194 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 MUC7Q8TAX7 377 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 C9orf85Q96MD7 179 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 SPANXDQ9BXN6 97 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 ARHGAP32A7KAX9 2087 aa2.97□□□□□ -1.93
SCN1A-214ENST00000637038 RBMY1BA6NDE4 496 aaKnown RBP2.96□□□□□ -1.93
SCN1A-214ENST00000637038 RBMY1EA6NEQ0 496 aaKnown RBP2.96□□□□□ -1.93
SCN1A-214ENST00000637038 H7C2G1 150 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 IGKV3-20P01619 116 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 TRBV12-3P01733 135 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 IGHV3-30P01768 117 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 RBMY1DP0C7P1 496 aaKnown RBP2.96□□□□□ -1.93
SCN1A-214ENST00000637038 P0DMU3 169 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 FAM231AP0DMU4 169 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 FAM231CP0DMU5 169 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 IFITM1P13164 125 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 EMP1P54849 157 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 UBE2D3P61077 147 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 UBE2D2P62837 147 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 MORN3Q6PF18 240 aaPredicted RBP2.96□□□□□ -1.93
SCN1A-214ENST00000637038 DYNLRB2Q8TF09 96 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 DNAJC30Q96LL9 226 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 DUX3Q96PT4 197 aa2.96□□□□□ -1.93
SCN1A-214ENST00000637038 TRAV8-4A0A0B4J246 113 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 IGHV4-61A0A0C4DH41 118 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 C9JAW5 83 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 PIK3CD-AS1Q5SR53 167 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 KLHL30-AS1Q8NEE0 82 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 PYGO1Q9Y3Y4 419 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 IGLV4-69A0A075B6H9 119 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 TMEM223A0PJW6 202 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 TTC32Q5I0X7 151 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 SFTA2Q6UW10 78 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 PRO0461Q9UI25 63 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 KIF25-AS1Q9Y6Z4 181 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 A0A0U1RRA0 63 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 M0QY20 66 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 IGHV4-38-2P0DP08 117 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 RPL39P62891 51 aaKnown RBP2.96□□□□□ -1.94
SCN1A-214ENST00000637038 ANAPC13Q9BS18 74 aa2.96□□□□□ -1.94
SCN1A-214ENST00000637038 K7EQG2 157 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 TCL1BO95988 128 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 GAGE2BQ13066 116 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 SPINK13Q1W4C9 94 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 GAGE2EQ4V326 116 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 Q8N1Y9 231 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 GAGE2DQ9UEU5 116 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 NDUFA12Q9UI09 145 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 H3BMM0 161 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 SPRY2O43597 315 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 INSP01308 110 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 CDSNQ15517 529 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 DEFB121Q5J5C9 76 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 ANKRD29Q8N6D5 301 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 DCANP1Q8TF63 244 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 UBE2WQ96B02 151 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 A0A0J9YXY3 114 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 H3BT86 120 aa2.95□□□□□ -1.94
SCN1A-214ENST00000637038 ZNF22P17026 224 aaPredicted RBP2.95□□□□□ -1.94
SCN1A-214ENST00000637038 SYNJ2BPP57105 145 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms