RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 A0A096LNI7 61 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 KRBOX1C9JBD0 128 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 M0R381 172 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 ATP6V1G1O75348 118 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 TMEM97Q5BJF2 176 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 CST9LP1Q5W188 147 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 C15orf56Q8N910 161 aa11.11□□□□□ -0.63
CLN6-212ENST00000636020 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.11□□□□□ -0.63
CLN6-212ENST00000636020 TRAV26-2A0A0B4J265 109 aa11.1□□□□□ -0.63
CLN6-212ENST00000636020 GRIFINA4D1Z8 144 aa11.1□□□□□ -0.63
CLN6-212ENST00000636020 RAB4BP61018 213 aa11.1□□□□□ -0.63
CLN6-212ENST00000636020 PRR4Q16378 134 aa11.1□□□□□ -0.63
CLN6-212ENST00000636020 C20orf203Q8NBC4 194 aa11.1□□□□□ -0.63
CLN6-212ENST00000636020 EPDR1Q9UM22 224 aa11.1□□□□□ -0.63
CLN6-212ENST00000636020 TMEM218A2RU14 115 aa11.09□□□□□ -0.63
CLN6-212ENST00000636020 SUMO1P63165 101 aaKnown RBP11.09□□□□□ -0.63
CLN6-212ENST00000636020 PRR26Q8N8Z3 221 aa11.09□□□□□ -0.63
CLN6-212ENST00000636020 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
CLN6-212ENST00000636020 NKX6-2Q9C056 277 aaPredicted RBP11.09□□□□□ -0.63
CLN6-212ENST00000636020 TRBV25-1A0A075B6N4 114 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 TRBV6-1A0A0K0K1D8 114 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 SCO2A0A1W2PP80 73 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 TMEM250H0YL14 139 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 M0R036 132 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 PDE6DO43924 150 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 ADCYAP1P18509 176 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 ZFP82Q8N141 532 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 DERL1Q9BUN8 251 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.64
CLN6-212ENST00000636020 CRIP1P50238 77 aa11.07□□□□□ -0.64
CLN6-212ENST00000636020 CACNG7P62955 275 aa11.07□□□□□ -0.64
CLN6-212ENST00000636020 IQCJQ1A5X6 159 aa11.07□□□□□ -0.64
CLN6-212ENST00000636020 CFAP161Q6P656 301 aa11.07□□□□□ -0.64
CLN6-212ENST00000636020 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
CLN6-212ENST00000636020 GFRA4Q9GZZ7 299 aa11.07□□□□□ -0.64
CLN6-212ENST00000636020 HIGD2BQ4VC39 106 aa11.06□□□□□ -0.64
CLN6-212ENST00000636020 C10orf91Q5T1B1 145 aa11.06□□□□□ -0.64
CLN6-212ENST00000636020 IGLV4-60A0A075B6I1 120 aa11.05□□□□□ -0.64
CLN6-212ENST00000636020 TRAV34A0A0B4J273 112 aa11.05□□□□□ -0.64
CLN6-212ENST00000636020 ZNF56Q15929 161 aa11.05□□□□□ -0.64
CLN6-212ENST00000636020 CRCT1Q9UGL9 99 aa11.05□□□□□ -0.64
CLN6-212ENST00000636020 A0A1B0GUV1 79 aa11.04□□□□□ -0.64
CLN6-212ENST00000636020 PEX7O00628 323 aa11.04□□□□□ -0.64
CLN6-212ENST00000636020 HIST1H2BAQ96A08 127 aa11.04□□□□□ -0.64
CLN6-212ENST00000636020 SEC11CQ9BY50 192 aa11.04□□□□□ -0.64
CLN6-212ENST00000636020 CARHSP1Q9Y2V2 147 aaKnown RBP11.04□□□□□ -0.64
CLN6-212ENST00000636020 IGHV1-24A0A0C4DH33 117 aa11.03□□□□□ -0.64
CLN6-212ENST00000636020 F8W036 122 aa11.03□□□□□ -0.64
CLN6-212ENST00000636020 CEBPGP53567 150 aa11.03□□□□□ -0.64
CLN6-212ENST00000636020 GAGE12HA6NDE8 117 aa11.02□□□□□ -0.65
CLN6-212ENST00000636020 SH2D1AO60880 128 aa11.02□□□□□ -0.65
CLN6-212ENST00000636020 S100A1P23297 94 aa11.02□□□□□ -0.65
CLN6-212ENST00000636020 AKR1C3P42330 323 aa11.01□□□□□ -0.65
CLN6-212ENST00000636020 SMIM7Q9BQ49 75 aa11.01□□□□□ -0.65
CLN6-212ENST00000636020 MUC17Q685J3 4493 aa11.01□□□□□ -0.65
CLN6-212ENST00000636020 TRBV20OR9-2A0A075B6H5 130 aa11□□□□□ -0.65
CLN6-212ENST00000636020 TMSB15BA0A087X1C1 80 aa11□□□□□ -0.65
CLN6-212ENST00000636020 ZNF727A8MUV8 499 aa11□□□□□ -0.65
CLN6-212ENST00000636020 RPL35P42766 123 aaKnown RBP11□□□□□ -0.65
CLN6-212ENST00000636020 ZNF674Q2M3X9 581 aa11□□□□□ -0.65
CLN6-212ENST00000636020 FAM74A3Q4VXF1 159 aa11□□□□□ -0.65
CLN6-212ENST00000636020 LCE2DQ5TA82 110 aaPredicted RBP11□□□□□ -0.65
CLN6-212ENST00000636020 GVQW2A0A096LPI5 108 aaPredicted RBP10.99□□□□□ -0.65
CLN6-212ENST00000636020 LINC01559Q495D7 138 aa10.99□□□□□ -0.65
CLN6-212ENST00000636020 COX8CQ7Z4L0 72 aa10.99□□□□□ -0.65
CLN6-212ENST00000636020 Q86TA4 180 aa10.99□□□□□ -0.65
CLN6-212ENST00000636020 F5H697 171 aa10.98□□□□□ -0.65
CLN6-212ENST00000636020 FAM162BQ5T6X4 162 aa10.98□□□□□ -0.65
CLN6-212ENST00000636020 FMC1Q96HJ9 113 aa10.98□□□□□ -0.65
CLN6-212ENST00000636020 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
CLN6-212ENST00000636020 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
CLN6-212ENST00000636020 S100A9P06702 114 aaKnown RBP10.97□□□□□ -0.65
CLN6-212ENST00000636020 CENPWQ5EE01 88 aa10.97□□□□□ -0.65
CLN6-212ENST00000636020 APOC3P02656 99 aa10.96□□□□□ -0.65
CLN6-212ENST00000636020 UBE2G1P62253 170 aa10.96□□□□□ -0.65
CLN6-212ENST00000636020 OR10AG1Q8NH19 301 aa10.96□□□□□ -0.65
CLN6-212ENST00000636020 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
CLN6-212ENST00000636020 LTAP01374 205 aa10.95□□□□□ -0.66
CLN6-212ENST00000636020 MT-ND6P03923 174 aa10.95□□□□□ -0.66
CLN6-212ENST00000636020 RPL23P62829 140 aaKnown RBP10.95□□□□□ -0.66
CLN6-212ENST00000636020 TMEM241Q24JQ0 296 aa10.95□□□□□ -0.66
CLN6-212ENST00000636020 FER1L6-AS1Q8NA97 138 aa10.95□□□□□ -0.66
CLN6-212ENST00000636020 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 GNG4P50150 75 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 PNRC1Q12796 327 aaPredicted RBP10.94□□□□□ -0.66
CLN6-212ENST00000636020 LINC01551Q86U37 167 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 SVBPQ8N300 66 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 DIRC1Q969H9 104 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 SMIM12Q96EX1 92 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 ZFP30Q9Y2G7 519 aa10.94□□□□□ -0.66
CLN6-212ENST00000636020 K7EN84 100 aa10.93□□□□□ -0.66
CLN6-212ENST00000636020 BAGE2Q86Y30 109 aa10.93□□□□□ -0.66
CLN6-212ENST00000636020 OCC1Q8TAD7 63 aa10.93□□□□□ -0.66
CLN6-212ENST00000636020 MLST8Q9BVC4 326 aa10.93□□□□□ -0.66
CLN6-212ENST00000636020 A0A1W2PNN7 141 aa10.92□□□□□ -0.66
CLN6-212ENST00000636020 ADIRFQ15847 76 aa10.92□□□□□ -0.66
CLN6-212ENST00000636020 C1orf137Q5JT78 98 aa10.92□□□□□ -0.66
CLN6-212ENST00000636020 CHCHD10Q8WYQ3 142 aaPredicted RBP10.92□□□□□ -0.66
CLN6-212ENST00000636020 IGKV3OR2-268A0A0C4DH90 116 aa10.91□□□□□ -0.66
CLN6-212ENST00000636020 SNAPINO95295 136 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 176.1 ms