RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 MUC22E2RYF6 1773 aaPredicted RBP2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 LINC00473A8K010 186 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 CDK2AP2O75956 126 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 BRWD1-AS2P59051 145 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 C16orf47Q6ZP98 133 aaPredicted RBP2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 Q86TA4 180 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 LINC01600Q96MT4 127 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.88□□□□□ -1.955e-11■■■■■ 97.2
R3HDM1-220ENST00000628915 IGHV3OR16-9A0A0B4J2B5 98 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 LINC01546A6NGU7 62 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 MED14OSP0DP75 135 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 COX7A1P24310 79 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 ERHP84090 104 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 IGFL3Q6UXB1 125 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 PHF5AQ7RTV0 110 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 WFDC9Q8NEX5 89 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 TMEM14BQ9NUH8 114 aa2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 CNOT1A5YKK6 2376 aaKnown RBP2.88□□□□□ -1.95
R3HDM1-220ENST00000628915 K7EQD1 137 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 ZNF491Q8N8L2 437 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 ASCC3Q8N3C0 2202 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 H7C423 109 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 M0R1W7 72 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 PROP1O75360 226 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 PRCDQ00LT1 54 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 LINC00322Q6ZN03 302 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 PRR15LQ9BU68 103 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 ICOSQ9Y6W8 199 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 TRAV12-1A0A0B4J245 112 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 K7ERS5 55 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 PRB2P02812 416 aaPredicted RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 FOLR3P41439 243 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 RNASE13Q5GAN3 156 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 GGNQ86UU5 652 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 AHCTF1Q8WYP5 2266 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 PRRC2CQ9Y520 2896 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 F8VRH5 84 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV3-33P01772 117 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 RPL27AP46776 148 aaKnown RBP2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 PATE1Q8WXA2 126 aa2.87□□□□□ -1.95
R3HDM1-220ENST00000628915 RTTNQ86VV8 2226 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 PATE4P0C8F1 98 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 CCL5P13501 91 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 HAMPP81172 84 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 Q8N2B8 174 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 FGF23Q9GZV9 251 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 WNK2Q9Y3S1 2297 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 CACNA1GO43497 2377 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 LINC00337Q8N6G1 96 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 NOTCH4Q99466 2003 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 IGKV1OR2-108A0A075B7D4 117 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV3-15A0A0B4J1V0 119 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 TRBV30A0A0K0K1B3 111 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 C3orf84H3BNL1 204 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 PRB1P04280 392 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 LYZL1Q6UWQ5 148 aa2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 ZNF625Q96I27 306 aaPredicted RBP2.86□□□□□ -1.95
R3HDM1-220ENST00000628915 Q0VFX4 171 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 KLKP1Q107X0 134 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 C9orf116Q5BN46 136 aaPredicted RBP2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 ENHOQ6UWT2 76 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 KLK15Q9H2R5 256 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 USF3Q68DE3 2245 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV1OR15-1A0A075B7D0 117 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 GNRH2O43555 120 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 BCE1O60756 84 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 MGPP08493 103 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 LYPD1Q8N2G4 141 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 LIMD2Q9BT23 127 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 IGLV9-49A0A0B4J1Y8 123 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 SDHAF1A6NFY7 115 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV1-8P0DP01 117 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 AKAP13Q12802 2813 aa2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 DYNC2H1Q8NCM8 4307 aaKnown RBP2.85□□□□□ -1.95
R3HDM1-220ENST00000628915 IGKV1D-17A0A075B6S4 117 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV3-43A0A0B4J1X8 118 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 DEFB108AA8MXU0 73 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 EPM2AB3EWF7 344 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV3-43DP0DP04 118 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 SYCNQ0VAF6 134 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 DEFB121Q5J5C9 76 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 Q6ZSV7 163 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 DEFB126Q9BYW3 111 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 TMEM14CQ9P0S9 112 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 IGHV3-72A0A0B4J1Y9 119 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 TRBV10-3A0A0K0K1G6 114 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 INAFM1C9JVW0 142 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 RNASE4P34096 147 aaKnown RBP2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 MSMPQ1L6U9 139 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 PATE2Q6UY27 113 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 CHCHD10Q8WYQ3 142 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 TRAV22A0A0B4J277 110 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 KRTAP16-1A8MUX0 517 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 E7EQL1 145 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 NTN3O00634 580 aaPredicted RBP2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 LYPD5Q6UWN5 251 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 SND1-IT1Q9HBX3 110 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 UBE2D4Q9Y2X8 147 aa2.84□□□□□ -1.95
R3HDM1-220ENST00000628915 SPTA1P02549 2419 aa2.84□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms