RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 AMTP48728 403 aa7.06□□□□□ -1.28
SSBP4-215ENST00000625926 TEX261Q6UWH6 196 aa7.06□□□□□ -1.28
SSBP4-215ENST00000625926 GATD1Q8NB37 220 aa7.06□□□□□ -1.28
SSBP4-215ENST00000625926 C20orf203Q8NBC4 194 aa7.06□□□□□ -1.28
SSBP4-215ENST00000625926 DEFB104AQ8WTQ1 72 aa7.06□□□□□ -1.28
SSBP4-215ENST00000625926 TRAV26-2A0A0B4J265 109 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 PRSS1P07477 247 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 FOXA3P55318 350 aaPredicted RBP7.05□□□□□ -1.28
SSBP4-215ENST00000625926 CT83Q5H943 113 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 DGAT2L7PQ6IED9 249 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 KRTAP26-1Q6PEX3 210 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 SCXQ7RTU7 201 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 LINC00528Q8N1L1 170 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 BORCS7Q96B45 105 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 SMIM7Q9BQ49 75 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
SSBP4-215ENST00000625926 IGLV4-60A0A075B6I1 120 aa7.04□□□□□ -1.28
SSBP4-215ENST00000625926 IGLV10-54A0A075B6I4 117 aa7.04□□□□□ -1.28
SSBP4-215ENST00000625926 ZNF727A8MUV8 499 aa7.04□□□□□ -1.28
SSBP4-215ENST00000625926 LINC01551Q86U37 167 aa7.04□□□□□ -1.28
SSBP4-215ENST00000625926 CLRN3Q8NCR9 226 aa7.04□□□□□ -1.28
SSBP4-215ENST00000625926 NCR2O95944 276 aa7.03□□□□□ -1.28
SSBP4-215ENST00000625926 SRP19P09132 144 aaKnown RBP7.03□□□□□ -1.28
SSBP4-215ENST00000625926 CIRBP-AS1Q8TBR5 109 aa7.03□□□□□ -1.28
SSBP4-215ENST00000625926 TSKUQ8WUA8 353 aa7.03□□□□□ -1.28
SSBP4-215ENST00000625926 RPL39LQ96EH5 51 aaKnown RBP7.03□□□□□ -1.28
SSBP4-215ENST00000625926 GFRA4Q9GZZ7 299 aa7.03□□□□□ -1.28
SSBP4-215ENST00000625926 SRRM2Q9UQ35 2752 aaKnown RBP7.02□□□□□ -1.29
SSBP4-215ENST00000625926 A0A1B0GVG6 124 aa7.02□□□□□ -1.29
SSBP4-215ENST00000625926 FAM231BA6NCW3 169 aa7.02□□□□□ -1.29
SSBP4-215ENST00000625926 SDHAF1A6NFY7 115 aa7.02□□□□□ -1.29
SSBP4-215ENST00000625926 AMMECR1LQ6DCA0 310 aa7.02□□□□□ -1.29
SSBP4-215ENST00000625926 C9orf163Q8N9P6 203 aa7.02□□□□□ -1.29
SSBP4-215ENST00000625926 OSTCQ9NRP0 149 aa7.02□□□□□ -1.29
SSBP4-215ENST00000625926 A0A1B0GUT8 65 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 HIGD1CA8MV81 97 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 H7C423 109 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 I3L3M4 83 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 APCSP02743 223 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 TMEM191AQ9H0A3 160 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 FAT1Q14517 4588 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 MYCBP2O75592 4640 aa7.01□□□□□ -1.29
SSBP4-215ENST00000625926 TRBV6-5A0A0K0K1A5 114 aa7□□□□□ -1.29
SSBP4-215ENST00000625926 hDV102S1A0JD36 115 aa7□□□□□ -1.29
SSBP4-215ENST00000625926 PMCHP20382 165 aa7□□□□□ -1.29
SSBP4-215ENST00000625926 TMEM241Q24JQ0 296 aa7□□□□□ -1.29
SSBP4-215ENST00000625926 FAM74A3Q4VXF1 159 aa7□□□□□ -1.29
SSBP4-215ENST00000625926 RNASEKQ6P5S7 137 aaKnown RBP7□□□□□ -1.29
SSBP4-215ENST00000625926 HMCN2Q8NDA2 5059 aa6.99□□□□□ -1.29
SSBP4-215ENST00000625926 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.99□□□□□ -1.29
SSBP4-215ENST00000625926 IGKV3OR2-268A0A0C4DH90 116 aa6.99□□□□□ -1.29
SSBP4-215ENST00000625926 IGKV2-29A2NJV5 120 aaPredicted RBP6.99□□□□□ -1.29
SSBP4-215ENST00000625926 FGF6P10767 208 aa6.99□□□□□ -1.29
SSBP4-215ENST00000625926 CNBPP62633 177 aaKnown RBP6.99□□□□□ -1.29
SSBP4-215ENST00000625926 SDIM1Q6ZPB5 146 aa6.99□□□□□ -1.29
SSBP4-215ENST00000625926 ST20Q9HBF5 79 aa6.99□□□□□ -1.29
SSBP4-215ENST00000625926 AP5S1Q9NUS5 200 aa6.99□□□□□ -1.29
SSBP4-215ENST00000625926 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.98□□□□□ -1.29
SSBP4-215ENST00000625926 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 GAS8-AS1O95177 125 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 ZNF25P17030 456 aaPredicted RBP6.98□□□□□ -1.29
SSBP4-215ENST00000625926 RAB4AP20338 218 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 RIGQ13278 110 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 CFAP161Q6P656 301 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 ISOC2Q96AB3 205 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 MRAP2Q96G30 205 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 RNF185Q96GF1 192 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 V9GYV3 84 aa6.98□□□□□ -1.29
SSBP4-215ENST00000625926 J3QL48 77 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 RPL23P62829 140 aaKnown RBP6.97□□□□□ -1.29
SSBP4-215ENST00000625926 PEA15Q15121 130 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 AMN1Q8IY45 258 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 NUP35Q8NFH5 326 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 TMEM101Q96IK0 257 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 BTF3L4Q96K17 158 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 NAT8BQ9UHF3 227 aa6.97□□□□□ -1.29
SSBP4-215ENST00000625926 C9JQL5 133 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 PPP1R17O96001 155 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 TSHBP01222 138 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 SLPIP03973 132 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 ESDP10768 282 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 RPS10P46783 165 aaKnown RBP6.96□□□□□ -1.3
SSBP4-215ENST00000625926 POLR2KP53803 58 aaKnown RBP6.96□□□□□ -1.3
SSBP4-215ENST00000625926 ADIRFQ15847 76 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 CHCHD10Q8WYQ3 142 aaPredicted RBP6.96□□□□□ -1.3
SSBP4-215ENST00000625926 SMDT1Q9H4I9 107 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 TMEM242Q9NWH2 141 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 NAT8Q9UHE5 227 aa6.96□□□□□ -1.3
SSBP4-215ENST00000625926 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.96□□□□□ -1.3
SSBP4-215ENST00000625926 DNAH8Q96JB1 4490 aa6.95□□□□□ -1.3
SSBP4-215ENST00000625926 IGHV3-64A0A075B6Q5 118 aa6.95□□□□□ -1.3
SSBP4-215ENST00000625926 TRBV27A0A0K0K1C4 114 aa6.95□□□□□ -1.3
SSBP4-215ENST00000625926 VCYO14598 125 aa6.95□□□□□ -1.3
SSBP4-215ENST00000625926 KRTAP10-4P60372 401 aaPredicted RBP6.95□□□□□ -1.3
SSBP4-215ENST00000625926 SRSF3P84103 164 aaKnown RBP6.95□□□□□ -1.3
SSBP4-215ENST00000625926 OR5A1Q8NGJ0 315 aa6.95□□□□□ -1.3
SSBP4-215ENST00000625926 DPH3Q96FX2 82 aa6.95□□□□□ -1.3
SSBP4-215ENST00000625926 SMIM27A0A1W2PRY6 76 aa6.94□□□□□ -1.3
SSBP4-215ENST00000625926 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
SSBP4-215ENST00000625926 PANO1I0J062 215 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms