RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 ODF3Q96PU9 254 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 IGLV3-1P01715 115 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 IGHV3-30P01768 117 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 IGHV3-33P01772 117 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 IGHV3-30-5P0DP03 117 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 ARHGAP21Q5T5U3 1957 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 SPG11Q96JI7 2443 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 FRMD6-AS1P0C7T7 363 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 BDP1A6H8Y1 2624 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 C2orf70A6NJV1 201 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 EDN2P20800 178 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 C7orf33Q8WU49 177 aa5.52□□□□□ -1.53
COLCA1-205ENST00000620864 DEFB136Q30KP8 78 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 LINC00337Q8N6G1 96 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 LINC00205P59089 165 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 NFE4Q86UQ8 179 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 ESM1Q9NQ30 184 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 ARHGAP32A7KAX9 2087 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 IGLV3-9A0A075B6K5 115 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 DEFB112Q30KQ8 113 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 PPDPFQ9H3Y8 114 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 MED12LQ86YW9 2145 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 FHL1Q13642 323 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 LINC00173Q6ZV60 143 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 NUPR1O60356 82 aa5.51□□□□□ -1.53
COLCA1-205ENST00000620864 IGLV1-44P01699 117 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 IGHV4-59P01825 116 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 HHLA3Q9XRX5 114 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 MED13Q9UHV7 2174 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 SHANK1Q9Y566 2161 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 NHLRC4P0CG21 123 aaPredicted RBP5.5□□□□□ -1.53
COLCA1-205ENST00000620864 MIFP14174 115 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 IGHV4-30-2A0A087WSY4 118 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 A0A1B0GXF2 115 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 ADORA2A-AS1P86434 159 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 TRBV27A0A0K0K1C4 114 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 I3L2K1 104 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 LINC00526Q96FQ7 95 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 YPEL4Q96NS1 127 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 DHRS4-AS1Q9P1J3 65 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 IGLV11-55A0A075B6I3 123 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 WWC2-AS2Q96NR7 200 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 SNURFQ9Y675 71 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 C19orf71A6NCJ1 209 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 ZNF581Q9P0T4 197 aa5.5□□□□□ -1.53
COLCA1-205ENST00000620864 ZNF706Q9Y5V0 76 aaPredicted RBP5.5□□□□□ -1.53
COLCA1-205ENST00000620864 EIF4EBP1Q13541 118 aaPredicted RBP5.49□□□□□ -1.53
COLCA1-205ENST00000620864 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
COLCA1-205ENST00000620864 TMEM263Q8WUH6 116 aaKnown RBP5.49□□□□□ -1.53
COLCA1-205ENST00000620864 FAM167A-AS1Q96KT0 104 aa5.49□□□□□ -1.53
COLCA1-205ENST00000620864 KIAA1549Q9HCM3 1950 aa5.49□□□□□ -1.53
COLCA1-205ENST00000620864 RPL39P62891 51 aaKnown RBP5.49□□□□□ -1.53
COLCA1-205ENST00000620864 HCFC1P51610 2035 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 NEXN-AS1Q8NBZ9 246 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 CCDC140Q96MF4 163 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 IGLV10-54A0A075B6I4 117 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 IGF2-ASQ6U949 168 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 GPR179Q6PRD1 2367 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 IGHV4OR15-8A0A075B7B6 117 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 A0A087WW49 117 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 CFAP126Q5VTH2 177 aa5.48□□□□□ -1.53
COLCA1-205ENST00000620864 TMEM223A0PJW6 202 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 LST1O00453 97 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 WFDC10AQ9H1F0 79 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 PRO0628Q9UI54 55 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 TTC28Q96AY4 2481 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 K7EIM0 57 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 DEFB4AO15263 64 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 PIEZO1Q92508 2521 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 TRIAP1O43715 76 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 ZFAND2AQ8N6M9 145 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 TPSG1Q9NRR2 321 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 FREM1Q5H8C1 2179 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 COX17Q14061 63 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 MDFIQ99750 246 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 APRG1Q8IVJ8 170 aa5.47□□□□□ -1.53
COLCA1-205ENST00000620864 MYO18BQ8IUG5 2567 aa5.46□□□□□ -1.53
COLCA1-205ENST00000620864 DEFB135Q30KP9 77 aa5.46□□□□□ -1.53
COLCA1-205ENST00000620864 CCKP06307 115 aa5.46□□□□□ -1.53
COLCA1-205ENST00000620864 Q6ZR03 302 aa5.46□□□□□ -1.53
COLCA1-205ENST00000620864 PRO0255Q9UI72 69 aa5.46□□□□□ -1.53
COLCA1-205ENST00000620864 C16orf90A8MZG2 172 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 IGKV1-17P01599 117 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 SLURP1P55000 103 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 Q6ZSR3 168 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 CTSGP08311 255 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 CXCL6P80162 114 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 C4orf26Q17RF5 130 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 INSL3P51460 131 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 FAM215AQ9Y5M1 114 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 A0A0J9YX75 114 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 PYGO1Q9Y3Y4 419 aa5.46□□□□□ -1.54
COLCA1-205ENST00000620864 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.45□□□□□ -1.54
COLCA1-205ENST00000620864 IGHV4-61A0A0C4DH41 118 aa5.45□□□□□ -1.54
COLCA1-205ENST00000620864 WFDC10BQ8IUB3 73 aa5.45□□□□□ -1.54
COLCA1-205ENST00000620864 ZNRD1Q9P1U0 126 aa5.45□□□□□ -1.54
COLCA1-205ENST00000620864 MRPS12O15235 138 aaKnown RBP5.45□□□□□ -1.54
COLCA1-205ENST00000620864 ZFHX2Q9C0A1 2572 aaPredicted RBP5.45□□□□□ -1.54
COLCA1-205ENST00000620864 C9orf85Q96MD7 179 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms