RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 LINC00588Q9Y4M8 146 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 IGHV3-73A0A0B4J1V6 119 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 NBDYA0A0U1RRE5 68 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 M0QY20 66 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 Q8N8P6 123 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 OR10D4PQ8NGN7 298 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 SMIM2Q9BVW6 85 aa11.19□□□□□ -0.62
CD40-207ENST00000620709 TRGV2A0A075B6R0 118 aa11.18□□□□□ -0.62
CD40-207ENST00000620709 FAM19A2Q8N3H0 131 aa11.18□□□□□ -0.62
CD40-207ENST00000620709 ST20Q9HBF5 79 aa11.18□□□□□ -0.62
CD40-207ENST00000620709 TRBV6-5A0A0K0K1A5 114 aa11.17□□□□□ -0.62
CD40-207ENST00000620709 LINC01546A6NGU7 62 aa11.17□□□□□ -0.62
CD40-207ENST00000620709 CIDEAO60543 219 aa11.17□□□□□ -0.62
CD40-207ENST00000620709 RPL32P62910 135 aaKnown RBP11.17□□□□□ -0.62
CD40-207ENST00000620709 PCLOQ9Y6V0 5065 aa11.17□□□□□ -0.62
CD40-207ENST00000620709 IGHV1-24A0A0C4DH33 117 aa11.16□□□□□ -0.62
CD40-207ENST00000620709 IGHV3-53P01767 116 aa11.16□□□□□ -0.62
CD40-207ENST00000620709 C6orf223Q8N319 242 aa11.16□□□□□ -0.62
CD40-207ENST00000620709 NIT2Q9NQR4 276 aa11.16□□□□□ -0.62
CD40-207ENST00000620709 TNP2Q05952 138 aa11.15□□□□□ -0.62
CD40-207ENST00000620709 LINC00612Q8N6U2 182 aa11.15□□□□□ -0.62
CD40-207ENST00000620709 ZNF479Q96JC4 524 aa11.15□□□□□ -0.62
CD40-207ENST00000620709 PMCHL1Q16048 86 aa11.14□□□□□ -0.63
CD40-207ENST00000620709 K7EMI3 77 aa11.14□□□□□ -0.63
CD40-207ENST00000620709 C18orf15Q96N68 181 aa11.14□□□□□ -0.63
CD40-207ENST00000620709 TMEM70Q9BUB7 260 aa11.14□□□□□ -0.63
CD40-207ENST00000620709 Q9H8V8 135 aa11.14□□□□□ -0.63
CD40-207ENST00000620709 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
CD40-207ENST00000620709 POLR2KP53803 58 aaKnown RBP11.13□□□□□ -0.63
CD40-207ENST00000620709 Q6ZSN1 163 aa11.13□□□□□ -0.63
CD40-207ENST00000620709 VCYO14598 125 aa11.12□□□□□ -0.63
CD40-207ENST00000620709 HBDP02042 147 aa11.12□□□□□ -0.63
CD40-207ENST00000620709 LAGE3Q14657 143 aa11.12□□□□□ -0.63
CD40-207ENST00000620709 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
CD40-207ENST00000620709 TRBV27A0A0K0K1C4 114 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 C16orf90A8MZG2 172 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 K7EQD1 137 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 TCAPO15273 167 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 LEPROTL1O95214 131 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 ESRGQ1W209 222 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 ORMDL2Q53FV1 153 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 NEXN-AS1Q8NBZ9 246 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 KIR2DL4Q99706 377 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 TNFRSF18Q9Y5U5 241 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 RYR1P21817 5038 aa11.11□□□□□ -0.63
CD40-207ENST00000620709 A0A096LNJ9 63 aa11.1□□□□□ -0.63
CD40-207ENST00000620709 TRBV10-1A0A0K0K1A3 114 aa11.1□□□□□ -0.63
CD40-207ENST00000620709 SMIM6P0DI80 62 aa11.1□□□□□ -0.63
CD40-207ENST00000620709 FCER1GP30273 86 aa11.1□□□□□ -0.63
CD40-207ENST00000620709 HSPB8Q9UJY1 196 aa11.1□□□□□ -0.63
CD40-207ENST00000620709 TRGV4A0A0C4DH28 118 aa11.09□□□□□ -0.63
CD40-207ENST00000620709 NEGR1Q7Z3B1 354 aa11.09□□□□□ -0.63
CD40-207ENST00000620709 TTC32Q5I0X7 151 aa11.09□□□□□ -0.63
CD40-207ENST00000620709 TRBV6-4A0A1B0GX49 114 aa11.08□□□□□ -0.64
CD40-207ENST00000620709 I3L3M4 83 aa11.08□□□□□ -0.64
CD40-207ENST00000620709 KRTDAPP60985 99 aa11.08□□□□□ -0.64
CD40-207ENST00000620709 JOSD1Q15040 202 aaPredicted RBP11.08□□□□□ -0.64
CD40-207ENST00000620709 PYY3Q5JQD4 70 aa11.08□□□□□ -0.64
CD40-207ENST00000620709 SLC25A29Q8N8R3 303 aa11.08□□□□□ -0.64
CD40-207ENST00000620709 H3BNG1 76 aa11.07□□□□□ -0.64
CD40-207ENST00000620709 BTF3P20290 206 aaKnown RBP11.07□□□□□ -0.64
CD40-207ENST00000620709 RPL36AP83881 106 aaKnown RBP11.07□□□□□ -0.64
CD40-207ENST00000620709 FHL2Q14192 279 aa11.07□□□□□ -0.64
CD40-207ENST00000620709 RHOHQ15669 191 aa11.07□□□□□ -0.64
CD40-207ENST00000620709 RPL36ALQ969Q0 106 aaKnown RBP11.07□□□□□ -0.64
CD40-207ENST00000620709 VSIG2Q96IQ7 327 aa11.07□□□□□ -0.64
CD40-207ENST00000620709 MRPS16Q9Y3D3 137 aaKnown RBP11.07□□□□□ -0.64
CD40-207ENST00000620709 LRP1BQ9NZR2 4599 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 HSPG2P98160 4391 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 A0A096LPF7 62 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 C3orf79P0CE67 100 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 G0S2P27469 103 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 PRADC1Q9BSG0 188 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 KRTAP1-5Q9BYS1 174 aa11.06□□□□□ -0.64
CD40-207ENST00000620709 TRBV7-3A0A075B6L6 115 aa11.05□□□□□ -0.64
CD40-207ENST00000620709 PAX4O43316 350 aa11.05□□□□□ -0.64
CD40-207ENST00000620709 LINC00173Q6ZV60 143 aa11.05□□□□□ -0.64
CD40-207ENST00000620709 UPK3BQ9BT76 320 aa11.05□□□□□ -0.64
CD40-207ENST00000620709 MAP1LC3CQ9BXW4 147 aa11.05□□□□□ -0.64
CD40-207ENST00000620709 Q9UF83 564 aa11.05□□□□□ -0.64
CD40-207ENST00000620709 LINC01549A6NIU2 74 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 TSHBP01222 138 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 SPATA12Q7Z6I5 190 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 LINC00518Q8N0U6 118 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 ICOSQ9Y6W8 199 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 ABCA13Q86UQ4 5058 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 TOMM6Q96B49 74 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
CD40-207ENST00000620709 ATP5LO75964 103 aa11.03□□□□□ -0.64
CD40-207ENST00000620709 SCGB1D1O95968 90 aa11.03□□□□□ -0.64
CD40-207ENST00000620709 C2orf66Q6UXQ4 117 aa11.03□□□□□ -0.64
CD40-207ENST00000620709 IFI27L1Q96BM0 104 aa11.03□□□□□ -0.64
CD40-207ENST00000620709 C12orf57Q99622 126 aa11.03□□□□□ -0.64
CD40-207ENST00000620709 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
CD40-207ENST00000620709 GAGE12JA6NER3 117 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 SYS1-DBNDD2H3BUS1 97 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 UBE2D3P61077 147 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 UBE2D2P62837 147 aa11.02□□□□□ -0.65
CD40-207ENST00000620709 GAGE1Q13065 139 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms