RNA–Protein interactions for RNA: ENST00000620507.4

RBFOX1-223, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-223ENST00000620507 ZMAT4Q9H898 229 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 TRAV13-1A0A0B4J241 112 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 TRBV27A0A0K0K1C4 114 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 ADARB2-AS1A8MUL3 147 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 F8W1H4 67 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 C18orf65Q6ZTR6 163 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 COPS9Q8WXC6 57 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 MAP6D1Q9H9H5 199 aa6.84□□□□□ -1.31
RBFOX1-223ENST00000620507 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 IGKV2-29A2NJV5 120 aaPredicted RBP6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 CFHR3Q02985 330 aa6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 WFDC11Q8NEX6 87 aa6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 AGRNO00468 2067 aa6.84□□□□□ -1.32
RBFOX1-223ENST00000620507 TMEM262E9PQX1 116 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 P0DMU3 169 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 FAM231AP0DMU4 169 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 FAM231CP0DMU5 169 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 RPL13AP40429 203 aaKnown RBP6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 C9orf85Q96MD7 179 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 NDUFA12Q9UI09 145 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 CRYGDP07320 174 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 HIST2H2BDQ6DRA6 164 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 PRO1854Q9UHT4 67 aa6.83□□□□□ -1.32
RBFOX1-223ENST00000620507 TRBV6-5A0A0K0K1A5 114 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 DNAJC9-AS1A6NH13 148 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 TMEM86BQ8N661 226 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 LAMA5O15230 3695 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 J3QKU1 62 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 CHCHD5Q9BSY4 110 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 LEPROTO15243 131 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 ACANP16112 2415 aa6.82□□□□□ -1.32
RBFOX1-223ENST00000620507 LINC01546A6NGU7 62 aa6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 Q6ZSV7 163 aa6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 SPANXA1Q9NS26 97 aa6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 ZZEF1O43149 2961 aa6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 TRAV25A0A0B4J276 109 aa6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 CEMP1Q6PRD7 247 aaPredicted RBP6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 ZNF625Q96I27 306 aaPredicted RBP6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 BBC3Q96PG8 261 aaPredicted RBP6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 NOP10Q9NPE3 64 aaKnown RBP6.81□□□□□ -1.32
RBFOX1-223ENST00000620507 PRM2P04554 102 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 DNAJC30Q96LL9 226 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 MORN3Q6PF18 240 aaPredicted RBP6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 FAM19A4Q96LR4 140 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 FAM110AQ9BQ89 295 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 NXPH4O95158 308 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 DEFB130BP0DP73 79 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 DEFB130AP0DP74 79 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 PROK1P58294 105 aa6.8□□□□□ -1.32
RBFOX1-223ENST00000620507 IGIPA6NJ69 53 aa6.79□□□□□ -1.32
RBFOX1-223ENST00000620507 FN1P02751 2386 aaKnown RBP6.79□□□□□ -1.32
RBFOX1-223ENST00000620507 WFDC2Q14508 124 aa6.79□□□□□ -1.32
RBFOX1-223ENST00000620507 PRIMA1Q86XR5 153 aa6.79□□□□□ -1.32
RBFOX1-223ENST00000620507 HIST2H2BCQ6DN03 193 aa6.79□□□□□ -1.32
RBFOX1-223ENST00000620507 KIF25-AS1Q9Y6Z4 181 aa6.79□□□□□ -1.32
RBFOX1-223ENST00000620507 ZFHX4Q86UP3 3567 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 IGLV4-3A0A075B6K6 122 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 C9JAW5 83 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 TSHBP01222 138 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 TRBV7-3A0A075B6L6 115 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 TMEM243Q9BU79 118 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 A0A0J9YY99 117 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 IFITM1P13164 125 aa6.78□□□□□ -1.32
RBFOX1-223ENST00000620507 HERVK_113P63121 156 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 C9orf153Q5TBE3 101 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 MUSTN1Q8IVN3 82 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 TRAV8-3A0A0A6YYJ7 113 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 TSPAN13O95857 204 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 CFC1BP0CG36 223 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 CFC1P0CG37 223 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 IGHV3-30-3P0DP02 117 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 CFAP126Q5VTH2 177 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 ATXN8Q156A1 80 aa6.77□□□□□ -1.33
RBFOX1-223ENST00000620507 LINC00315P59091 139 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 SLC25A29Q8N8R3 303 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 V9GYY9 64 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 COL12A1Q99715 3063 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 K7EQD1 137 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 ZNF575Q86XF7 245 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 NDUFA11Q86Y39 141 aa6.76□□□□□ -1.33
RBFOX1-223ENST00000620507 F5H768 121 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 Q6ZUT4 128 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 TMEM263Q8WUH6 116 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 PKIGQ9Y2B9 76 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 DCHS1Q96JQ0 3298 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 TMEM223A0PJW6 202 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 MT-ATP8P03928 68 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 HTN3P15516 51 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 DAZ2Q13117 558 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 Q6ZTI0 123 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 DAZ4Q86SG3 579 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 DAZ3Q9NR90 486 aaKnown RBP6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 IGHV1-58A0A0C4DH39 117 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 LINC00158P58513 81 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 C16orf74Q96GX8 76 aa6.75□□□□□ -1.33
RBFOX1-223ENST00000620507 IGLV4-69A0A075B6H9 119 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms