RNA–Protein interactions for RNA: ENST00000620389.1

SRSF3-207, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-207ENST00000620389 A0A087WWL8 130 aa6.3□□□□□ -1.4
SRSF3-207ENST00000620389 TRBV6-5A0A0K0K1A5 114 aa6.3□□□□□ -1.4
SRSF3-207ENST00000620389 RPL11P62913 178 aaKnown RBP6.3□□□□□ -1.4
SRSF3-207ENST00000620389 RNF5Q99942 180 aa6.3□□□□□ -1.4
SRSF3-207ENST00000620389 LENEPQ9Y5L5 61 aa6.3□□□□□ -1.4
SRSF3-207ENST00000620389 CEP250Q9BV73 2442 aa6.3□□□□□ -1.4
SRSF3-207ENST00000620389 LYPD2Q6UXB3 125 aa6.29□□□□□ -1.4
SRSF3-207ENST00000620389 LINC00308Q8TCZ7 52 aa6.29□□□□□ -1.4
SRSF3-207ENST00000620389 SIRPDQ9H106 197 aa6.29□□□□□ -1.4
SRSF3-207ENST00000620389 CACNA1GO43497 2377 aa6.29□□□□□ -1.4
SRSF3-207ENST00000620389 TPRP12270 2363 aaKnown RBP6.29□□□□□ -1.4
SRSF3-207ENST00000620389 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
SRSF3-207ENST00000620389 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
SRSF3-207ENST00000620389 C6orf226Q5I0X4 101 aa6.28□□□□□ -1.4
SRSF3-207ENST00000620389 TACC2O95359 2948 aa6.28□□□□□ -1.4
SRSF3-207ENST00000620389 ASPMQ8IZT6 3477 aa6.28□□□□□ -1.4
SRSF3-207ENST00000620389 CCKP06307 115 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 SS18Q15532 418 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 C9orf106Q8NAJ2 232 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 LY6G5BQ8NDX9 201 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 WFDC9Q8NEX5 89 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 COPS9Q8WXC6 57 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 ZNF576Q9H609 170 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 ROS1P08922 2347 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 IGHV3-49A0A0A0MS15 119 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 EPOPA6NHQ4 379 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 CD28P10747 220 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 FAM74A4Q5TZK3 123 aa6.27□□□□□ -1.41
SRSF3-207ENST00000620389 TRBV7-6A0A0J9YX20 115 aa6.26□□□□□ -1.41
SRSF3-207ENST00000620389 CCL21O00585 134 aa6.26□□□□□ -1.41
SRSF3-207ENST00000620389 ABCA4P78363 2273 aa6.26□□□□□ -1.41
SRSF3-207ENST00000620389 RP1L1Q8IWN7 2480 aaPredicted RBP6.26□□□□□ -1.41
SRSF3-207ENST00000620389 FAM19A1Q7Z5A9 133 aa6.26□□□□□ -1.41
SRSF3-207ENST00000620389 FAM104AQ969W3 186 aa6.26□□□□□ -1.41
SRSF3-207ENST00000620389 M0QY20 66 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 NDUFA1O15239 70 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 COX7A1P24310 79 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 RBM3P98179 157 aaKnown RBP6.25□□□□□ -1.41
SRSF3-207ENST00000620389 HIST2H2BCQ6DN03 193 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 HIST2H2BDQ6DRA6 164 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 PTPRQQ9UMZ3 2332 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 A0A0U1RRA0 63 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 SOCS3O14543 225 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 RNASE13Q5GAN3 156 aaKnown RBP6.25□□□□□ -1.41
SRSF3-207ENST00000620389 ATP5EP2Q5VTU8 51 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 SOSTDC1Q6X4U4 206 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 CCL17Q92583 94 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 CEP290O15078 2479 aa6.25□□□□□ -1.41
SRSF3-207ENST00000620389 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
SRSF3-207ENST00000620389 ENHOQ6UWT2 76 aa6.24□□□□□ -1.41
SRSF3-207ENST00000620389 LOC400499M0QZD8 3231 aa6.24□□□□□ -1.41
SRSF3-207ENST00000620389 POLEQ07864 2286 aa6.24□□□□□ -1.41
SRSF3-207ENST00000620389 F8WEM9 126 aa6.24□□□□□ -1.41
SRSF3-207ENST00000620389 S100A7L2Q5SY68 101 aa6.24□□□□□ -1.41
SRSF3-207ENST00000620389 COL27A1Q8IZC6 1860 aaPredicted RBP6.24□□□□□ -1.41
SRSF3-207ENST00000620389 ZNF625Q96I27 306 aaPredicted RBP6.24□□□□□ -1.41
SRSF3-207ENST00000620389 NCR3O14931 201 aa6.23□□□□□ -1.41
SRSF3-207ENST00000620389 ITLN2Q8WWU7 325 aaPredicted RBP6.23□□□□□ -1.41
SRSF3-207ENST00000620389 SNURFQ9Y675 71 aa6.23□□□□□ -1.41
SRSF3-207ENST00000620389 TRAV7A0A075B6U4 112 aa6.23□□□□□ -1.41
SRSF3-207ENST00000620389 DEFB1P60022 68 aa6.23□□□□□ -1.41
SRSF3-207ENST00000620389 NPBQ8NG41 125 aa6.23□□□□□ -1.41
SRSF3-207ENST00000620389 OVOL2Q9BRP0 275 aa6.23□□□□□ -1.41
SRSF3-207ENST00000620389 A0A087WYN8 130 aa6.22□□□□□ -1.41
SRSF3-207ENST00000620389 C15orf32Q32M92 178 aa6.22□□□□□ -1.41
SRSF3-207ENST00000620389 RMI2Q96E14 147 aa6.22□□□□□ -1.41
SRSF3-207ENST00000620389 BPESC1Q9GZL8 116 aa6.22□□□□□ -1.41
SRSF3-207ENST00000620389 Q9H8V8 135 aa6.22□□□□□ -1.41
SRSF3-207ENST00000620389 CFHR3Q02985 330 aa6.22□□□□□ -1.41
SRSF3-207ENST00000620389 FAM110DQ8TAY7 271 aaPredicted RBP6.22□□□□□ -1.41
SRSF3-207ENST00000620389 PKDREJQ9NTG1 2253 aa6.21□□□□□ -1.42
SRSF3-207ENST00000620389 APRG1Q8IVJ8 170 aa6.21□□□□□ -1.42
SRSF3-207ENST00000620389 MPLKIPQ8TAP9 179 aa6.21□□□□□ -1.42
SRSF3-207ENST00000620389 KAAG1Q9UBP8 84 aa6.21□□□□□ -1.42
SRSF3-207ENST00000620389 CDKN2A-AS1Q9UH64 79 aa6.21□□□□□ -1.42
SRSF3-207ENST00000620389 TRBV10-3A0A0K0K1G6 114 aa6.21□□□□□ -1.42
SRSF3-207ENST00000620389 BCE1O60756 84 aa6.2□□□□□ -1.42
SRSF3-207ENST00000620389 BLCAPP62952 87 aa6.2□□□□□ -1.42
SRSF3-207ENST00000620389 PF4P02776 101 aa6.2□□□□□ -1.42
SRSF3-207ENST00000620389 SNRPD3P62318 126 aaKnown RBP6.2□□□□□ -1.42
SRSF3-207ENST00000620389 CACNA1BQ00975 2339 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 TRAV13-2A0A0B4J235 113 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 F6UB75 175 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 ATP5EP56381 51 aaPredicted RBP6.19□□□□□ -1.42
SRSF3-207ENST00000620389 PIK3CD-AS1Q5SR53 167 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 IGFL2Q6UWQ7 119 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 CLEC19AQ6UXS0 136 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 MIR7-3HGQ8N6C7 128 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 RETNQ9HD89 108 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 U3KQE9 123 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.19□□□□□ -1.42
SRSF3-207ENST00000620389 CCDC140Q96MF4 163 aa6.19□□□□□ -1.42
SRSF3-207ENST00000620389 NDUFC1O43677 76 aa6.18□□□□□ -1.42
SRSF3-207ENST00000620389 CRPP02741 224 aa6.18□□□□□ -1.42
SRSF3-207ENST00000620389 FAM229BQ4G0N7 80 aa6.18□□□□□ -1.42
SRSF3-207ENST00000620389 LECT2O14960 151 aa6.18□□□□□ -1.42
SRSF3-207ENST00000620389 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms