RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 ODF3L2Q3SX64 289 aa8.05□□□□□ -1.12
POLR2A-209ENST00000617998 RPL39LQ96EH5 51 aaKnown RBP8.05□□□□□ -1.12
POLR2A-209ENST00000617998 UFSP1Q6NVU6 142 aa8.05□□□□□ -1.12
POLR2A-209ENST00000617998 FUSP35637 526 aaKnown RBP eCLIP8.05□□□□□ -1.12
POLR2A-209ENST00000617998 MED14OSP0DP75 135 aa8.05□□□□□ -1.12
POLR2A-209ENST00000617998 IFITM3Q01628 133 aa8.05□□□□□ -1.12
POLR2A-209ENST00000617998 KMT2EQ8IZD2 1858 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 TRBV6-8A0A0A6YYG3 113 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 GDF5OSQ5U4N7 250 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 BTCP35070 178 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 ZC2HC1BQ5TFG8 222 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 USP9YO00507 2555 aaPredicted RBP8.04□□□□□ -1.12
POLR2A-209ENST00000617998 INAFM2P0DMQ5 153 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 FOXI1Q12951 378 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 ACANP16112 2415 aa8.04□□□□□ -1.12
POLR2A-209ENST00000617998 SIGMAR1Q99720 223 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 DDTP30046 118 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 CTAG1AP78358 180 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 REG3GQ6UW15 175 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 MLST8Q9BVC4 326 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 CRYGBP07316 175 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 ZFAND2AQ8N6M9 145 aa8.03□□□□□ -1.12
POLR2A-209ENST00000617998 PATE2Q6UY27 113 aa8.02□□□□□ -1.12
POLR2A-209ENST00000617998 PTPRBP23467 1997 aa8.02□□□□□ -1.13
POLR2A-209ENST00000617998 RPL28P46779 137 aaKnown RBP8.02□□□□□ -1.13
POLR2A-209ENST00000617998 C14orf144Q96I85 54 aa8.02□□□□□ -1.13
POLR2A-209ENST00000617998 IGLV4-69A0A075B6H9 119 aa8.02□□□□□ -1.13
POLR2A-209ENST00000617998 PLAC8L1A1L4L8 177 aa8.02□□□□□ -1.13
POLR2A-209ENST00000617998 C20orf173Q96LM9 149 aa8.02□□□□□ -1.13
POLR2A-209ENST00000617998 C9JQL5 133 aa8.01□□□□□ -1.13
POLR2A-209ENST00000617998 NPYP01303 97 aa8.01□□□□□ -1.13
POLR2A-209ENST00000617998 H7C423 109 aa8.01□□□□□ -1.13
POLR2A-209ENST00000617998 ASPHD1Q5U4P2 390 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 DIRC1Q969H9 104 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 CYYR1Q96J86 154 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 ZFAND3Q9H8U3 227 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 FAM236DA0A1B0GTK5 79 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 K7EMI3 77 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 FAM236CP0DP71 79 aa8□□□□□ -1.13
POLR2A-209ENST00000617998 ANKRD17O75179 2603 aaKnown RBP7.99□□□□□ -1.13
POLR2A-209ENST00000617998 CFAP126Q5VTH2 177 aa7.99□□□□□ -1.13
POLR2A-209ENST00000617998 PCP2Q8IVA1 136 aa7.99□□□□□ -1.13
POLR2A-209ENST00000617998 C1orf137Q5JT78 98 aa7.99□□□□□ -1.13
POLR2A-209ENST00000617998 Q8N2B8 174 aa7.99□□□□□ -1.13
POLR2A-209ENST00000617998 IGLC2P0DOY2 106 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 C1orf158Q8N1D5 194 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 FAM231DQ6ZW35 169 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 RBX1P62877 108 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 SPATA12Q7Z6I5 190 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 SETD2Q9BYW2 2564 aaPredicted RBP7.98□□□□□ -1.13
POLR2A-209ENST00000617998 H0Y9J4 135 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 LINC01556Q5JQF7 62 aa7.98□□□□□ -1.13
POLR2A-209ENST00000617998 OPRPNQ99935 248 aaPredicted RBP7.98□□□□□ -1.13
POLR2A-209ENST00000617998 MPV17L2Q567V2 206 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 C19orf71A6NCJ1 209 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 HIST1H4AP62805 103 aaKnown RBP7.97□□□□□ -1.13
POLR2A-209ENST00000617998 MORN5Q5VZ52 161 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 GAGE2AQ6NT46 116 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 PPDPFQ9H3Y8 114 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 SND1-IT1Q9HBX3 110 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 ZNF580Q9UK33 172 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 LOC100131303A0A0U1RQF7 123 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 K7EIL1 84 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 J3QQQ9 107 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 SOCS3O14543 225 aa7.97□□□□□ -1.13
POLR2A-209ENST00000617998 SPINK6Q6UWN8 80 aa7.96□□□□□ -1.13
POLR2A-209ENST00000617998 GATA1P15976 413 aaPredicted RBP7.96□□□□□ -1.14
POLR2A-209ENST00000617998 EML5Q05BV3 1969 aa7.96□□□□□ -1.14
POLR2A-209ENST00000617998 BVES-AS1Q5T3Y7 98 aa7.96□□□□□ -1.14
POLR2A-209ENST00000617998 LINC00336Q6ZUF6 198 aa7.95□□□□□ -1.14
POLR2A-209ENST00000617998 A0A0J9YXV3 536 aa7.95□□□□□ -1.14
POLR2A-209ENST00000617998 CHCHD7Q9BUK0 85 aa7.95□□□□□ -1.14
POLR2A-209ENST00000617998 EXPH5Q8NEV8 1989 aa7.95□□□□□ -1.14
POLR2A-209ENST00000617998 USP17L23D6RBM5 183 aa7.95□□□□□ -1.14
POLR2A-209ENST00000617998 TRACP01848 142 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 CYTL1Q9NRR1 136 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 HRCT1Q6UXD1 115 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 NEXN-AS1Q8NBZ9 246 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 COL4A2P08572 1712 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 IGLV9-49A0A0B4J1Y8 123 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 DCANP1Q8TF63 244 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 ATG2AQ2TAZ0 1938 aa7.94□□□□□ -1.14
POLR2A-209ENST00000617998 COX7BP24311 80 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 F8VRH5 84 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 HELZ2Q9BYK8 2649 aaKnown RBP7.93□□□□□ -1.14
POLR2A-209ENST00000617998 TRAV8-2A0A0B4J237 113 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 PRM2P04554 102 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 HAMPP81172 84 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 C2orf82Q6UX34 121 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 NBDYA0A0U1RRE5 68 aa7.93□□□□□ -1.14
POLR2A-209ENST00000617998 CRIP2P52943 208 aaPredicted RBP7.93□□□□□ -1.14
POLR2A-209ENST00000617998 RPL39P62891 51 aaKnown RBP7.92□□□□□ -1.14
POLR2A-209ENST00000617998 EDN2P20800 178 aa7.92□□□□□ -1.14
POLR2A-209ENST00000617998 C11orf52Q96A22 123 aa7.92□□□□□ -1.14
POLR2A-209ENST00000617998 SAMD5Q5TGI4 173 aa7.92□□□□□ -1.14
POLR2A-209ENST00000617998 Q6ZUT4 128 aa7.92□□□□□ -1.14
POLR2A-209ENST00000617998 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
POLR2A-209ENST00000617998 TCL1BO95988 128 aa7.92□□□□□ -1.14
POLR2A-209ENST00000617998 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms