RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 PKDREJQ9NTG1 2253 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 IGLV1-47P01700 117 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 Q6ZVQ6 151 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 ERG28Q9UKR5 140 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 FAM236AA0A1B0GUQ0 79 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 FAM236BA0A1B0GV22 79 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 NDUFC2O95298 119 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 Q6ZSR3 168 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 EGFEM1PQ0D2K5 195 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 DDTP30046 118 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 MALRD1Q5VYJ5 2156 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 EP300Q09472 2414 aaPredicted RBP2.49□□□□□ -2.01
LPP-220ENST00000617246 GVINP1Q7Z2Y8 2422 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 RPL37AP8A6NKH3 93 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 D6R8Y8 96 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 GATA1P15976 413 aaPredicted RBP2.49□□□□□ -2.01
LPP-220ENST00000617246 FOXA3P55318 350 aaPredicted RBP2.49□□□□□ -2.01
LPP-220ENST00000617246 GNG5P63218 68 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 PROK2Q9HC23 129 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 C10orf142B7Z368 130 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 K7EQG2 157 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 Q6ZS46 218 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 LINC00269Q8N2A0 174 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 LINC00614P0C842 121 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 KRTAP10-9P60411 292 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 LINC00476Q8WZB0 136 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 NOTCH3Q9UM47 2321 aa2.49□□□□□ -2.01
LPP-220ENST00000617246 MSMPQ1L6U9 139 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 BEAN1Q3B7T3 259 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 C2orf66Q6UXQ4 117 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 H0YGX0 51 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 COX17Q14061 63 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 EIF4EBP1Q13541 118 aaPredicted RBP2.48□□□□□ -2.01
LPP-220ENST00000617246 LECT2O14960 151 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 OPRPNQ99935 248 aaPredicted RBP2.48□□□□□ -2.01
LPP-220ENST00000617246 ABCA4P78363 2273 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 TRAV23DV6A0A075B6W5 121 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 COLCA2A8K830 154 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 GUSBP1Q15486 140 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 Q8N2B8 174 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 C20orf173Q96LM9 149 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 IGLV2-14P01704 120 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 TRBV10-2A0A0K0K1G8 114 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 C20orf197Q8N268 126 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 SSBP4Q9BWG4 385 aaPredicted RBP2.48□□□□□ -2.01
LPP-220ENST00000617246 DLEU1O43261 78 aa2.48□□□□□ -2.01
LPP-220ENST00000617246 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.47□□□□□ -2.01
LPP-220ENST00000617246 IGKV2-29A2NJV5 120 aaPredicted RBP2.47□□□□□ -2.01
LPP-220ENST00000617246 IGLC1P0CG04 106 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 PYY3Q5JQD4 70 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 DKK2Q9UBU2 259 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 IGKV1-9A0A0C4DH69 117 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 PLA2G10O15496 165 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 OXTP01178 125 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 A0A1W2PNU3 283 aaPredicted RBP2.47□□□□□ -2.01
LPP-220ENST00000617246 SPATA45Q537H7 98 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 PLP1P60201 277 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 EBI3Q14213 229 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 CHCHD10Q8WYQ3 142 aaPredicted RBP2.47□□□□□ -2.01
LPP-220ENST00000617246 PRR13Q9NZ81 148 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 PLA2G2DQ9UNK4 145 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 C5orf38Q86SI9 138 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 SYS1-DBNDD2H3BUS1 97 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 IFITM1P13164 125 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 SERTAD4-AS1Q5TG53 156 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 Q8N8P6 123 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 LRRK2Q5S007 2527 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 F8VRH5 84 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 TRBV6-8A0A0A6YYG3 113 aa2.47□□□□□ -2.01
LPP-220ENST00000617246 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.46□□□□□ -2.013e-6■■□□□ 12.1
LPP-220ENST00000617246 WNK1Q9H4A3 2382 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 IGLV1-40P01703 118 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 CXCL3P19876 107 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
LPP-220ENST00000617246 BRI3O95415 125 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 NREPQ16612 68 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 FXYD1O00168 92 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 PDE6GP18545 87 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 MT-ATP8P03928 68 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 HAMPP81172 84 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 NAV3Q8IVL0 2385 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 SMIM27A0A1W2PRY6 76 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 C22orf34Q6ZV56 151 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 RNASE7Q9H1E1 156 aaKnown RBP2.46□□□□□ -2.02
LPP-220ENST00000617246 VSIRQ9H7M9 311 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 SPANXB1Q9NS25 103 aaPredicted RBP2.46□□□□□ -2.02
LPP-220ENST00000617246 BAALC-AS2P0C853 105 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 Q8NBF4 154 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 RNASE8Q8TDE3 154 aaKnown RBP2.46□□□□□ -2.02
LPP-220ENST00000617246 TMEM256-PLSCR3K7ERE1 68 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 LINC00315P59091 139 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 CRYBA4P53673 196 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 SND1-IT1Q9HBX3 110 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 A0A0J9YXY3 114 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 GPHA2Q96T91 129 aa2.46□□□□□ -2.02
LPP-220ENST00000617246 TEN1Q86WV5 123 aa2.45□□□□□ -2.02
LPP-220ENST00000617246 TP73-AS1Q9UF72 201 aa2.45□□□□□ -2.02
LPP-220ENST00000617246 AVPP01185 164 aa2.45□□□□□ -2.02
LPP-220ENST00000617246 WFDC9Q8NEX5 89 aa2.45□□□□□ -2.02
LPP-220ENST00000617246 MRPL35Q9NZE8 188 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms