RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 AMELXQ99217 191 aa9.99□□□□□ -0.81
PCDHA11-202ENST00000616325 TIMM21Q9BVV7 248 aa9.99□□□□□ -0.81
PCDHA11-202ENST00000616325 ADAMTSL4-AS1Q5T5F5 129 aa9.99□□□□□ -0.81
PCDHA11-202ENST00000616325 C10orf99Q6UWK7 81 aa9.99□□□□□ -0.81
PCDHA11-202ENST00000616325 A0A0B4J2C4 111 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 P0DMU3 169 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 FAM231AP0DMU4 169 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 FAM231CP0DMU5 169 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 KLRB1Q12918 225 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 MOB4Q9Y3A3 225 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 IGHV1-69DA0A0B4J2H0 117 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 IGHV3-30-3P0DP02 117 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 EBI3Q14213 229 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 SPINK13Q1W4C9 94 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 TMEM223A0PJW6 202 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 CD28P10747 220 aa9.98□□□□□ -0.81
PCDHA11-202ENST00000616325 KNCNA6PVL3 124 aa9.97□□□□□ -0.81
PCDHA11-202ENST00000616325 NDUFA12Q9UI09 145 aa9.97□□□□□ -0.81
PCDHA11-202ENST00000616325 POLR2KP53803 58 aaKnown RBP9.97□□□□□ -0.81
PCDHA11-202ENST00000616325 Q6Q795 121 aa9.97□□□□□ -0.81
PCDHA11-202ENST00000616325 MDFICQ9P1T7 246 aa9.97□□□□□ -0.81
PCDHA11-202ENST00000616325 I3L3M4 83 aa9.97□□□□□ -0.81
PCDHA11-202ENST00000616325 LMO4P61968 165 aa9.96□□□□□ -0.81
PCDHA11-202ENST00000616325 TIMM17AQ99595 171 aa9.96□□□□□ -0.81
PCDHA11-202ENST00000616325 C19orf84I3L1E1 186 aa9.96□□□□□ -0.82
PCDHA11-202ENST00000616325 CFAP46Q8IYW2 2715 aa9.95□□□□□ -0.82
PCDHA11-202ENST00000616325 TRBV30A0A0K0K1B3 111 aa9.95□□□□□ -0.82
PCDHA11-202ENST00000616325 NRGNQ92686 78 aa9.95□□□□□ -0.82
PCDHA11-202ENST00000616325 FBN2P35556 2912 aa9.95□□□□□ -0.82
PCDHA11-202ENST00000616325 IGHV4-61A0A0C4DH41 118 aa9.95□□□□□ -0.82
PCDHA11-202ENST00000616325 OVOL1O14753 267 aa9.95□□□□□ -0.82
PCDHA11-202ENST00000616325 ANKRD17O75179 2603 aaKnown RBP9.94□□□□□ -0.82
PCDHA11-202ENST00000616325 HERVK_113P63121 156 aa9.94□□□□□ -0.82
PCDHA11-202ENST00000616325 LINC01587Q99440 93 aa9.94□□□□□ -0.82
PCDHA11-202ENST00000616325 TMEM126AQ9H061 195 aa9.94□□□□□ -0.82
PCDHA11-202ENST00000616325 PIEZO1Q92508 2521 aa9.94□□□□□ -0.82
PCDHA11-202ENST00000616325 FN1P02751 2386 aaKnown RBP9.94□□□□□ -0.82
PCDHA11-202ENST00000616325 MTORP42345 2549 aa9.93□□□□□ -0.82
PCDHA11-202ENST00000616325 KHDC1LQ5JSQ8 128 aa9.93□□□□□ -0.82
PCDHA11-202ENST00000616325 LINC00315P59091 139 aa9.93□□□□□ -0.82
PCDHA11-202ENST00000616325 RHOHQ15669 191 aa9.92□□□□□ -0.82
PCDHA11-202ENST00000616325 GAGE2AQ6NT46 116 aa9.92□□□□□ -0.82
PCDHA11-202ENST00000616325 ITLN2Q8WWU7 325 aaPredicted RBP9.92□□□□□ -0.82
PCDHA11-202ENST00000616325 DAZ1Q9NQZ3 744 aaKnown RBP9.92□□□□□ -0.82
PCDHA11-202ENST00000616325 H3BT86 120 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 IGHV1-69P01742 117 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 FBXL19-AS1Q494R0 122 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 MRPL53Q96EL3 112 aaKnown RBP9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 NF1P21359 2839 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 NDUFA4O00483 81 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 HOXD3P31249 432 aaPredicted RBP9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 SYNJ2BPP57105 145 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 PROK1P58294 105 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 KIF25-AS1Q9Y6Z4 181 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 CHD6Q8TD26 2715 aa9.91□□□□□ -0.82
PCDHA11-202ENST00000616325 IGHV3-38A0A0C4DH36 116 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 FAM223BA6NKX1 122 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 NXPH4O95158 308 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 GNLYP22749 145 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 FAM223AQ8IWN6 122 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 NDUFA7O95182 113 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 C20orf203Q8NBC4 194 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 LENEPQ9Y5L5 61 aa9.9□□□□□ -0.82
PCDHA11-202ENST00000616325 IGHV4OR15-8A0A075B7B6 117 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 A0A087WW49 117 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 CSDC2Q9Y534 153 aaKnown RBP9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 U3KQE9 123 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 IGHV3OR16-12A0A075B7B8 117 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 TRBV27A0A0K0K1C4 114 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 LST1O00453 97 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 NSUN5P1Q3KNT7 163 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 MXRA5Q9NR99 2828 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 C3orf22Q8N5N4 141 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 POM121L12Q8N7R1 296 aa9.89□□□□□ -0.83
PCDHA11-202ENST00000616325 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 IGHV3-16A0A0C4DH30 117 aa9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 IGKV2-29A2NJV5 120 aaPredicted RBP9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 NIPBLQ6KC79 2804 aaeCLIP9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 M0QY20 66 aa9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 DEFB136Q30KP8 78 aa9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 DGAT2L7PQ6IED9 249 aa9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 FAM19A5Q7Z5A7 132 aaPredicted RBP9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 Q9HAA7 133 aa9.88□□□□□ -0.83
PCDHA11-202ENST00000616325 DAZ2Q13117 558 aaKnown RBP9.87□□□□□ -0.83
PCDHA11-202ENST00000616325 DAZ4Q86SG3 579 aaKnown RBP9.87□□□□□ -0.83
PCDHA11-202ENST00000616325 SMCR5Q8TEV8 140 aa9.87□□□□□ -0.83
PCDHA11-202ENST00000616325 DAZ3Q9NR90 486 aaKnown RBP9.87□□□□□ -0.83
PCDHA11-202ENST00000616325 BAALC-AS2P0C853 105 aa9.87□□□□□ -0.83
PCDHA11-202ENST00000616325 TEX15Q9BXT5 2789 aa9.87□□□□□ -0.83
PCDHA11-202ENST00000616325 IGHV4-30-2A0A087WSY4 118 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 IGKV3D-7A0A0C4DH55 119 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 CCL19Q99731 98 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 SPANXA1Q9NS26 97 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 Q9UF83 564 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 MIAQ16674 131 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 TMEM61Q8N0U2 210 aa9.86□□□□□ -0.83
PCDHA11-202ENST00000616325 ACANP16112 2415 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms