RNA–Protein interactions for RNA: ENST00000613954.4

ATF3-211, Transcript of activating transcription factor 3, humanhuman

TSL 5 BASIC

Gene ATF3, Length 2,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-211ENST00000613954 IGHV3-16A0A0C4DH30 117 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 I3L3M4 83 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
ATF3-211ENST00000613954 GAGE5Q13069 117 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 GAGE6Q13070 117 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 C20orf203Q8NBC4 194 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 ZNF702PQ9H963 129 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 TNFRSF18Q9Y5U5 241 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 KRTAP1-1Q07627 177 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 MUSTN1Q8IVN3 82 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 DCANP1Q8TF63 244 aa8.29□□□□□ -1.08
ATF3-211ENST00000613954 CSMD1Q96PZ7 3565 aa8.28□□□□□ -1.08
ATF3-211ENST00000613954 ITPR3Q14573 2671 aa8.28□□□□□ -1.08
ATF3-211ENST00000613954 M0R2P5 195 aa8.28□□□□□ -1.08
ATF3-211ENST00000613954 PSMB8P28062 276 aa8.28□□□□□ -1.08
ATF3-211ENST00000613954 Q1RN00 199 aa8.28□□□□□ -1.08
ATF3-211ENST00000613954 ANAPC13Q9BS18 74 aa8.28□□□□□ -1.08
ATF3-211ENST00000613954 TRBV30A0A0K0K1B3 111 aa8.27□□□□□ -1.09
ATF3-211ENST00000613954 SRD5A1P18405 259 aa8.27□□□□□ -1.09
ATF3-211ENST00000613954 CITED2Q99967 270 aaPredicted RBP8.27□□□□□ -1.09
ATF3-211ENST00000613954 GCN1Q92616 2671 aaKnown RBP8.27□□□□□ -1.09
ATF3-211ENST00000613954 RPL13AP40429 203 aaKnown RBP8.27□□□□□ -1.09
ATF3-211ENST00000613954 SNRPD3P62318 126 aaKnown RBP8.27□□□□□ -1.09
ATF3-211ENST00000613954 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
ATF3-211ENST00000613954 CITED1Q99966 193 aa8.27□□□□□ -1.09
ATF3-211ENST00000613954 YAE1D1Q9NRH1 226 aa8.27□□□□□ -1.09
ATF3-211ENST00000613954 PYGO1Q9Y3Y4 419 aa8.27□□□□□ -1.09
ATF3-211ENST00000613954 IGLV4-3A0A075B6K6 122 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 IGHV1OR15-1A0A075B7D0 117 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 SNCGO76070 127 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 LINC01620Q4KN68 170 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 Q8N2B8 174 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 EDA2RQ9HAV5 297 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 UNC79Q9P2D8 2635 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 NBPF19A0A087WUL8 3843 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 TEX15Q9BXT5 2789 aa8.26□□□□□ -1.09
ATF3-211ENST00000613954 A0A0J9YXY3 114 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 TRBV10-2A0A0K0K1G8 114 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 EIF4EBP3O60516 100 aaPredicted RBP8.25□□□□□ -1.09
ATF3-211ENST00000613954 RNF183Q96D59 192 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 DUX5Q96PT3 197 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 OPRPNQ99935 248 aaPredicted RBP8.25□□□□□ -1.09
ATF3-211ENST00000613954 A0A0J9YXV3 536 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 H7C2G1 150 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 ELANEP08246 267 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 HERV-K104P63124 156 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 GAGE2BQ13066 116 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 GAGE2EQ4V326 116 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 Q6Q795 121 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 Q8N1Y9 231 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 TIMM21Q9BVV7 248 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 GAGE2DQ9UEU5 116 aa8.25□□□□□ -1.09
ATF3-211ENST00000613954 TRGV11A0A075B6L2 103 aa8.24□□□□□ -1.09
ATF3-211ENST00000613954 COX6CP09669 75 aa8.24□□□□□ -1.09
ATF3-211ENST00000613954 C10orf99Q6UWK7 81 aa8.24□□□□□ -1.09
ATF3-211ENST00000613954 NTN5Q8WTR8 489 aaPredicted RBP8.24□□□□□ -1.09
ATF3-211ENST00000613954 IGHV3-30-3P0DP02 117 aa8.24□□□□□ -1.09
ATF3-211ENST00000613954 MRPS36P82909 103 aaKnown RBP8.24□□□□□ -1.09
ATF3-211ENST00000613954 SPANXDQ9BXN6 97 aa8.24□□□□□ -1.09
ATF3-211ENST00000613954 SPANXCQ9NY87 97 aa8.24□□□□□ -1.09
ATF3-211ENST00000613954 IGHV3-64A0A075B6Q5 118 aa8.23□□□□□ -1.09
ATF3-211ENST00000613954 DNAJC9-AS1A6NH13 148 aa8.23□□□□□ -1.09
ATF3-211ENST00000613954 CD28P10747 220 aa8.23□□□□□ -1.09
ATF3-211ENST00000613954 RNF152Q8N8N0 203 aa8.23□□□□□ -1.09
ATF3-211ENST00000613954 CCDC168Q8NDH2 2452 aa8.23□□□□□ -1.09
ATF3-211ENST00000613954 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 IGHV1-58A0A0C4DH39 117 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 H3BMM0 161 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 UBE2WQ96B02 151 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 ITPR2Q14571 2701 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 FLNAP21333 2647 aaKnown RBP8.22□□□□□ -1.09
ATF3-211ENST00000613954 TRAV12-2A0A075B6T6 113 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 H3BT86 120 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 K7EQG2 157 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 TRIAP1O43715 76 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 LITAFQ99732 161 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 SS18L2Q9UHA2 77 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 ZFHX3Q15911 3703 aa8.22□□□□□ -1.09
ATF3-211ENST00000613954 MXRA5Q9NR99 2828 aa8.21□□□□□ -1.09
ATF3-211ENST00000613954 MRPL23Q16540 153 aaKnown RBP8.21□□□□□ -1.1
ATF3-211ENST00000613954 UBE2E2Q96LR5 201 aa8.21□□□□□ -1.1
ATF3-211ENST00000613954 ICOSQ9Y6W8 199 aa8.21□□□□□ -1.1
ATF3-211ENST00000613954 TINCRA0A1B0GVN0 87 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 EDN2P20800 178 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 SPINK13Q1W4C9 94 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 TTC32Q5I0X7 151 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 C2orf82Q6UX34 121 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 NDUFA12Q9UI09 145 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 IGKV3-20P01619 116 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 PRSS2P07478 247 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 NDUFV3P56181 108 aaKnown RBP8.2□□□□□ -1.1
ATF3-211ENST00000613954 MIAQ16674 131 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 ESM1Q9NQ30 184 aa8.2□□□□□ -1.1
ATF3-211ENST00000613954 TEX49A0A1B0GTD5 131 aa8.19□□□□□ -1.1
ATF3-211ENST00000613954 TIMM17BO60830 172 aa8.19□□□□□ -1.1
ATF3-211ENST00000613954 IFITM1P13164 125 aa8.19□□□□□ -1.1
ATF3-211ENST00000613954 PIK3CD-AS1Q5SR53 167 aa8.19□□□□□ -1.1
ATF3-211ENST00000613954 Q6ZSV7 163 aa8.19□□□□□ -1.1
ATF3-211ENST00000613954 TRAV4A0A0B4J268 109 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms