RNA–Protein interactions for RNA: ENST00000610359.4

MUC1-221, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-221ENST00000610359 IGHV1-58A0A0C4DH39 117 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 C17orf112F2Z3M2 114 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 F5H697 171 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 K7EQM0 130 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 FGF6P10767 208 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 CAMPP49913 170 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 PYDC2Q56P42 97 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 KRTAP7-1Q8IUC3 87 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 NUP35Q8NFH5 326 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 TYMSOSQ8TAI1 123 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 DEDD2Q8WXF8 326 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 MRPS26Q9BYN8 205 aaKnown RBP3.94□□□□□ -1.78
MUC1-221ENST00000610359 PPDPFQ9H3Y8 114 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 V9GYH0 126 aa3.94□□□□□ -1.78
MUC1-221ENST00000610359 IGLV4-69A0A075B6H9 119 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 MUC21A0A140T8X8 626 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 M0QY20 66 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 ARL14EPLP0DKL9 152 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 BTCP35070 178 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 XCL1P47992 114 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 DEFA3P59666 94 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
MUC1-221ENST00000610359 LINC00173Q6ZV60 143 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 Q86TA4 180 aa3.93□□□□□ -1.78
MUC1-221ENST00000610359 H3BMQ9 156 aa3.92□□□□□ -1.78
MUC1-221ENST00000610359 UBE2L6O14933 153 aa3.92□□□□□ -1.78
MUC1-221ENST00000610359 APOMO95445 188 aa3.92□□□□□ -1.78
MUC1-221ENST00000610359 NKX2-5P52952 324 aaPredicted RBP3.92□□□□□ -1.78
MUC1-221ENST00000610359 KRTAP13-2Q52LG2 175 aa3.92□□□□□ -1.78
MUC1-221ENST00000610359 COX8CQ7Z4L0 72 aa3.92□□□□□ -1.78
MUC1-221ENST00000610359 OPRPNQ99935 248 aaPredicted RBP3.92□□□□□ -1.78
MUC1-221ENST00000610359 RBM38Q9H0Z9 239 aaKnown RBP3.92□□□□□ -1.78
MUC1-221ENST00000610359 CCL25O15444 150 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 ZNF861PO60384 105 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 SUMO4Q6EEV6 95 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 PGLYRP4Q96LB8 373 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 MED28Q9H204 178 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 ANAPC11Q9NYG5 84 aa3.91□□□□□ -1.78
MUC1-221ENST00000610359 LINC00959A0A1B0GUT2 108 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 A0A1W2PPV4 95 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 H0YIZ8 118 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 SNAI2O43623 268 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 SCGB1D1O95968 90 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 TSHBP01222 138 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 STAG3L2P0CL84 134 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 STAG3L3P0CL85 134 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 GCHFRP30047 84 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 SSTP61278 116 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 RNF151Q2KHN1 245 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 KRTAP13-3Q3SY46 172 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 EIF5AL1Q6IS14 154 aaKnown RBP3.9□□□□□ -1.79
MUC1-221ENST00000610359 FAM19A5Q7Z5A7 132 aaPredicted RBP3.9□□□□□ -1.79
MUC1-221ENST00000610359 OR5A1Q8NGJ0 315 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 ISOC2Q96AB3 205 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 SEC22CQ9BRL7 303 aa3.9□□□□□ -1.79
MUC1-221ENST00000610359 MACF1Q9UPN3 7388 aaKnown RBP3.9□□□□□ -1.79
MUC1-221ENST00000610359 NAP1L6A6NFF2 107 aa3.89□□□□□ -1.79
MUC1-221ENST00000610359 SEC61BP60468 96 aaKnown RBP3.89□□□□□ -1.79
MUC1-221ENST00000610359 LINC00304Q8N9R0 145 aa3.89□□□□□ -1.79
MUC1-221ENST00000610359 TSKUQ8WUA8 353 aa3.89□□□□□ -1.79
MUC1-221ENST00000610359 CAMK2N2Q96S95 79 aa3.89□□□□□ -1.79
MUC1-221ENST00000610359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.88□□□□□ -1.79
MUC1-221ENST00000610359 IGKV2-29A2NJV5 120 aaPredicted RBP3.88□□□□□ -1.79
MUC1-221ENST00000610359 PEX7O00628 323 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 BCL2L11O43521 198 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 MGPP08493 103 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 CDC34P49427 236 aaPredicted RBP3.88□□□□□ -1.79
MUC1-221ENST00000610359 UBE2BP63146 152 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 COTL1Q14019 142 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 LCE4AQ5TA78 99 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 SPANXN1Q5VSR9 72 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 AMMECR1LQ6DCA0 310 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
MUC1-221ENST00000610359 LINC00337Q8N6G1 96 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 SMIM3Q9BZL3 60 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 WFDC1Q9HC57 220 aa3.88□□□□□ -1.79
MUC1-221ENST00000610359 M0QXV9 152 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 OR5AL1P0C617 328 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 SMIM17P0DL12 118 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 LINC00310P59036 64 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 RASL11AQ6T310 242 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 CD164L2Q6UWJ8 174 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 Q6ZNX1 250 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 SCGB1C1Q8TD33 95 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 C2orf48Q96LS8 159 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 ZFP30Q9Y2G7 519 aa3.87□□□□□ -1.79
MUC1-221ENST00000610359 A0A1W2PRE2 83 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 C19orf71A6NCJ1 209 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 CXCL1P09341 107 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 ESDP10768 282 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 NTF3P20783 257 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 SS18Q15532 418 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 LINC00242Q5T6M2 205 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 LCE1DQ5T752 114 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 AP1S3Q96PC3 154 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 NIT2Q9NQR4 276 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 HSPB11Q9Y547 144 aa3.86□□□□□ -1.79
MUC1-221ENST00000610359 SIX6O95475 246 aa3.85□□□□□ -1.79
MUC1-221ENST00000610359 LTAP01374 205 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms