RNA–Protein interactions for RNA: ENST00000608788.5

LINC01278-203, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 5 BASIC

Gene LINC01278, Length 820 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-203ENST00000608788 TNFSF18Q9UNG2 199 aa8.69□□□□□ -1.02
LINC01278-203ENST00000608788 GAGE12HA6NDE8 117 aa8.68□□□□□ -1.02
LINC01278-203ENST00000608788 F5H697 171 aa8.68□□□□□ -1.02
LINC01278-203ENST00000608788 M0QY20 66 aa8.68□□□□□ -1.02
LINC01278-203ENST00000608788 OR5AL1P0C617 328 aa8.68□□□□□ -1.02
LINC01278-203ENST00000608788 UBE2G2P60604 165 aa8.68□□□□□ -1.02
LINC01278-203ENST00000608788 SRSF3P84103 164 aaKnown RBP8.68□□□□□ -1.02
LINC01278-203ENST00000608788 NKX6-2Q9C056 277 aaPredicted RBP8.68□□□□□ -1.02
LINC01278-203ENST00000608788 LINC00474Q9P2X8 69 aa8.68□□□□□ -1.02
LINC01278-203ENST00000608788 FAM231BA6NCW3 169 aa8.67□□□□□ -1.02
LINC01278-203ENST00000608788 TMEM243Q9BU79 118 aa8.67□□□□□ -1.02
LINC01278-203ENST00000608788 A0A0U1RQV1 116 aa8.66□□□□□ -1.02
LINC01278-203ENST00000608788 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
LINC01278-203ENST00000608788 GIPP09681 153 aaPredicted RBP8.65□□□□□ -1.02
LINC01278-203ENST00000608788 ZNF664Q8N3J9 261 aa8.65□□□□□ -1.02
LINC01278-203ENST00000608788 PSORS1C2Q9UIG4 136 aa8.65□□□□□ -1.02
LINC01278-203ENST00000608788 SULT1A2P50226 295 aa8.64□□□□□ -1.03
LINC01278-203ENST00000608788 UBE2G1P62253 170 aa8.64□□□□□ -1.03
LINC01278-203ENST00000608788 SPANXN1Q5VSR9 72 aa8.64□□□□□ -1.03
LINC01278-203ENST00000608788 PGLYRP4Q96LB8 373 aa8.64□□□□□ -1.03
LINC01278-203ENST00000608788 CTXND1A0A1B0GTU2 59 aa8.63□□□□□ -1.03
LINC01278-203ENST00000608788 AP1S3Q96PC3 154 aa8.63□□□□□ -1.03
LINC01278-203ENST00000608788 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
LINC01278-203ENST00000608788 MLST8Q9BVC4 326 aa8.63□□□□□ -1.03
LINC01278-203ENST00000608788 SUMO4Q6EEV6 95 aa8.62□□□□□ -1.03
LINC01278-203ENST00000608788 PRR26Q8N8Z3 221 aa8.62□□□□□ -1.03
LINC01278-203ENST00000608788 CHCHD10Q8WYQ3 142 aaPredicted RBP8.62□□□□□ -1.03
LINC01278-203ENST00000608788 SMIM17P0DL12 118 aa8.61□□□□□ -1.03
LINC01278-203ENST00000608788 FHITP49789 147 aa8.61□□□□□ -1.03
LINC01278-203ENST00000608788 NKX2-5P52952 324 aaPredicted RBP8.61□□□□□ -1.03
LINC01278-203ENST00000608788 FOXI1Q12951 378 aa8.61□□□□□ -1.03
LINC01278-203ENST00000608788 ANKRD39Q53RE8 183 aa8.61□□□□□ -1.03
LINC01278-203ENST00000608788 SSTP61278 116 aa8.6□□□□□ -1.03
LINC01278-203ENST00000608788 Q6ZNX1 250 aa8.6□□□□□ -1.03
LINC01278-203ENST00000608788 PKIGQ9Y2B9 76 aa8.6□□□□□ -1.03
LINC01278-203ENST00000608788 FSIP2Q5CZC0 6907 aa8.6□□□□□ -1.03
LINC01278-203ENST00000608788 A0A1W2PNN7 141 aa8.59□□□□□ -1.03
LINC01278-203ENST00000608788 PTTG1IPP53801 180 aa8.59□□□□□ -1.03
LINC01278-203ENST00000608788 TRAV26-2A0A0B4J265 109 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 IGKV3OR2-268A0A0C4DH90 116 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 UBE2L6O14933 153 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 AKR1C3P42330 323 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 CACNG7P62955 275 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 RASL11AQ6T310 242 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 LINC00526Q96FQ7 95 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 CARD19Q96LW7 228 aa8.58□□□□□ -1.04
LINC01278-203ENST00000608788 MGPP08493 103 aa8.57□□□□□ -1.04
LINC01278-203ENST00000608788 AMTP48728 403 aa8.57□□□□□ -1.04
LINC01278-203ENST00000608788 RPL7L1Q6DKI1 246 aaKnown RBP8.57□□□□□ -1.04
LINC01278-203ENST00000608788 NIT2Q9NQR4 276 aa8.57□□□□□ -1.04
LINC01278-203ENST00000608788 IGLC6P0CF74 106 aa8.56□□□□□ -1.04
LINC01278-203ENST00000608788 COTL1Q14019 142 aa8.56□□□□□ -1.04
LINC01278-203ENST00000608788 MUC17Q685J3 4493 aa8.55□□□□□ -1.04
LINC01278-203ENST00000608788 MAP1LC3B2A6NCE7 125 aa8.55□□□□□ -1.04
LINC01278-203ENST00000608788 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
LINC01278-203ENST00000608788 PRR4Q16378 134 aa8.55□□□□□ -1.04
LINC01278-203ENST00000608788 CST9LP1Q5W188 147 aa8.55□□□□□ -1.04
LINC01278-203ENST00000608788 MAP1LC3BQ9GZQ8 125 aa8.55□□□□□ -1.04
LINC01278-203ENST00000608788 IGHV1-58A0A0C4DH39 117 aa8.54□□□□□ -1.04
LINC01278-203ENST00000608788 MT-ND6P03923 174 aa8.54□□□□□ -1.04
LINC01278-203ENST00000608788 KRTAP1-4P0C5Y4 121 aa8.54□□□□□ -1.04
LINC01278-203ENST00000608788 SYCNQ0VAF6 134 aa8.54□□□□□ -1.04
LINC01278-203ENST00000608788 BAGE2Q86Y30 109 aa8.54□□□□□ -1.04
LINC01278-203ENST00000608788 STOML3Q8TAV4 291 aa8.54□□□□□ -1.04
LINC01278-203ENST00000608788 IGLV1-50A0A075B6I6 118 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 FXYD6-FXYD2A0A087WZ82 144 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 NTF3P20783 257 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 Q5BKY6 102 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 C1orf137Q5JT78 98 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 FER1L6-AS1Q8NA97 138 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 DIRC1Q969H9 104 aa8.53□□□□□ -1.04
LINC01278-203ENST00000608788 HMSDA8MTL9 139 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 H0Y9J4 135 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 PAGE4O60829 102 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 IGLV7-43P04211 117 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 XCL1P47992 114 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 ZNF345Q14585 488 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
LINC01278-203ENST00000608788 AKR1C8PQ5T2L2 129 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 AKAP14Q86UN6 197 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 TCTE3Q8IZS6 198 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 OR5A1Q8NGJ0 315 aa8.52□□□□□ -1.05
LINC01278-203ENST00000608788 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
LINC01278-203ENST00000608788 H7C423 109 aa8.51□□□□□ -1.05
LINC01278-203ENST00000608788 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
LINC01278-203ENST00000608788 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.5□□□□□ -1.05
LINC01278-203ENST00000608788 BORCS7-ASMTA0A0B4J1R7 106 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 LINC00959A0A1B0GUT2 108 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 IGKV2-29A2NJV5 120 aaPredicted RBP8.5□□□□□ -1.05
LINC01278-203ENST00000608788 CCL25O15444 150 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 ARPC5O15511 151 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 FGF6P10767 208 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 CAMPP49913 170 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 AMMECR1LQ6DCA0 310 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 PHF5AQ7RTV0 110 aaKnown RBP8.5□□□□□ -1.05
LINC01278-203ENST00000608788 TPPP3Q9BW30 176 aa8.5□□□□□ -1.05
LINC01278-203ENST00000608788 NCR2O95944 276 aa8.49□□□□□ -1.05
LINC01278-203ENST00000608788 BCL2P10415 239 aa8.49□□□□□ -1.05
LINC01278-203ENST00000608788 RNASEKQ6P5S7 137 aaKnown RBP8.49□□□□□ -1.05
LINC01278-203ENST00000608788 KRTAP11-1Q8IUC1 163 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms