RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 FANCD2OSQ96PS1 177 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 POLEQ07864 2286 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 COX7A2LO14548 114 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 PPP1R17O96001 155 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 DNAL4O96015 105 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 IGHV1-8P0DP01 117 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 COX7A1P24310 79 aa9.31□□□□□ -0.92
CTCFL-218ENST00000608440 CLPSL1A2RUU4 121 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 HILS1P60008 231 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 CDSNQ15517 529 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 HOXD3P31249 432 aaPredicted RBP9.3□□□□□ -0.92
CTCFL-218ENST00000608440 DEFB1P60022 68 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 RNASE13Q5GAN3 156 aaKnown RBP9.3□□□□□ -0.92
CTCFL-218ENST00000608440 SUMO4Q6EEV6 95 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 Q8N2B8 174 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 NUP37Q8NFH4 326 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 ZFAND3Q9H8U3 227 aa9.3□□□□□ -0.92
CTCFL-218ENST00000608440 NDUFB3O43676 98 aa9.29□□□□□ -0.92
CTCFL-218ENST00000608440 CTSGP08311 255 aa9.29□□□□□ -0.92
CTCFL-218ENST00000608440 INAFM2P0DMQ5 153 aa9.29□□□□□ -0.92
CTCFL-218ENST00000608440 C22orf34Q6ZV56 151 aa9.29□□□□□ -0.92
CTCFL-218ENST00000608440 C14orf132Q9NPU4 83 aa9.29□□□□□ -0.92
CTCFL-218ENST00000608440 LINC00846Q9NV44 126 aa9.29□□□□□ -0.92
CTCFL-218ENST00000608440 FAM74A4Q5TZK3 123 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 WFDC9Q8NEX5 89 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 CCL17Q92583 94 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 FAM218AQ96MZ4 157 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 GHRHP01286 108 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 C9orf129Q5T035 196 aaKnown RBP9.28□□□□□ -0.92
CTCFL-218ENST00000608440 VMO1Q7Z5L0 202 aa9.28□□□□□ -0.92
CTCFL-218ENST00000608440 TRAV23DV6A0A075B6W5 121 aa9.27□□□□□ -0.92
CTCFL-218ENST00000608440 IGLV11-55A0A075B6I3 123 aa9.27□□□□□ -0.93
CTCFL-218ENST00000608440 NDUFC2O95298 119 aa9.27□□□□□ -0.93
CTCFL-218ENST00000608440 RPL11P62913 178 aaKnown RBP9.27□□□□□ -0.93
CTCFL-218ENST00000608440 C16orf95Q9H693 158 aa9.27□□□□□ -0.93
CTCFL-218ENST00000608440 PKDREJQ9NTG1 2253 aa9.27□□□□□ -0.93
CTCFL-218ENST00000608440 BUB3O43684 328 aa9.26□□□□□ -0.93
CTCFL-218ENST00000608440 LINC00315P59091 139 aa9.26□□□□□ -0.93
CTCFL-218ENST00000608440 BEAN1Q3B7T3 259 aa9.26□□□□□ -0.93
CTCFL-218ENST00000608440 FP248Q71RG6 208 aaPredicted RBP9.26□□□□□ -0.93
CTCFL-218ENST00000608440 PRIMA1Q86XR5 153 aa9.26□□□□□ -0.93
CTCFL-218ENST00000608440 ZNF625Q96I27 306 aaPredicted RBP9.26□□□□□ -0.93
CTCFL-218ENST00000608440 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 Q6JHZ5 121 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 SERP1Q9Y6X1 66 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 ABCA4P78363 2273 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 IGLV3-9A0A075B6K5 115 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RBMY1BA6NDE4 496 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RBMY1EA6NEQ0 496 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 IGHV1-69P01742 117 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RBMY1DP0C7P1 496 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RBMY1A1P0DJD3 496 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RBMY1CP0DJD4 496 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RNASE3P12724 160 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
CTCFL-218ENST00000608440 COL12A1Q99715 3063 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 IGLV4-3A0A075B6K6 122 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 IL17DQ8TAD2 202 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 LINC00474Q9P2X8 69 aa9.25□□□□□ -0.93
CTCFL-218ENST00000608440 CACNA1BQ00975 2339 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 IGHV4OR15-8A0A075B7B6 117 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 A0A087WW49 117 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 TRAV21A0A0B4J279 112 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 IGHV1-58A0A0C4DH39 117 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 CCL21O00585 134 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 TRBV12-3P01733 135 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 UBE2D4Q9Y2X8 147 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 KIF25-AS1Q9Y6Z4 181 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 MUC4Q99102 2169 aa9.24□□□□□ -0.93
CTCFL-218ENST00000608440 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 TMEM178BH3BS89 294 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 PSMB8P28062 276 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 RPL28P46779 137 aaKnown RBP9.23□□□□□ -0.93
CTCFL-218ENST00000608440 XCL1P47992 114 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 XCL2Q9UBD3 114 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 NDUFC2-KCTD14E9PQ53 114 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 IGLV1-47P01700 117 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 ZFAND2AQ8N6M9 145 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 LINC00482Q8N8I6 264 aa9.23□□□□□ -0.93
CTCFL-218ENST00000608440 IGHG2P01859 326 aa9.22□□□□□ -0.93
CTCFL-218ENST00000608440 CD28P10747 220 aa9.22□□□□□ -0.93
CTCFL-218ENST00000608440 RNASE6Q93091 150 aaKnown RBP9.22□□□□□ -0.93
CTCFL-218ENST00000608440 NBR2O15453 112 aa9.22□□□□□ -0.93
CTCFL-218ENST00000608440 BSPH1Q075Z2 132 aa9.21□□□□□ -0.93
CTCFL-218ENST00000608440 VSIG2Q96IQ7 327 aa9.21□□□□□ -0.93
CTCFL-218ENST00000608440 ANKHD1Q8IWZ3 2542 aaKnown RBP9.21□□□□□ -0.93
CTCFL-218ENST00000608440 USP24Q9UPU5 2620 aa9.21□□□□□ -0.93
CTCFL-218ENST00000608440 ZFYVE26Q68DK2 2539 aa9.21□□□□□ -0.94
CTCFL-218ENST00000608440 GRNP28799 593 aaKnown RBP9.21□□□□□ -0.94
CTCFL-218ENST00000608440 SS18Q15532 418 aa9.21□□□□□ -0.94
CTCFL-218ENST00000608440 C20orf203Q8NBC4 194 aa9.21□□□□□ -0.94
CTCFL-218ENST00000608440 LINC00308Q8TCZ7 52 aa9.21□□□□□ -0.94
CTCFL-218ENST00000608440 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
CTCFL-218ENST00000608440 LRBAP50851 2863 aa9.2□□□□□ -0.94
CTCFL-218ENST00000608440 KNCNA6PVL3 124 aa9.2□□□□□ -0.94
CTCFL-218ENST00000608440 EPM2AB3EWF7 344 aa9.2□□□□□ -0.94
CTCFL-218ENST00000608440 ADORA2A-AS1P86434 159 aa9.2□□□□□ -0.94
CTCFL-218ENST00000608440 FAM222AQ5U5X8 452 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms