RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 RPL23P62829 140 aaKnown RBP6.93□□□□□ -1.3
TUBE1-210ENST00000604967 ISOC2Q96AB3 205 aa6.93□□□□□ -1.3
TUBE1-210ENST00000604967 OSTCQ9NRP0 149 aa6.93□□□□□ -1.3
TUBE1-210ENST00000604967 IGLV10-54A0A075B6I4 117 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 A8MWL6 223 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 EPM2AB3EWF7 344 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 USP17L23D6RBM5 183 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 H7C1H1 209 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 ELOBQ15370 118 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 NUP35Q8NFH5 326 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 TSKUQ8WUA8 353 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 TMEM243Q9BU79 118 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 HERC1Q15751 4861 aa6.92□□□□□ -1.3
TUBE1-210ENST00000604967 SMKR1H3BMG3 65 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 PANO1I0J062 215 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 SLPIP03973 132 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 KRTAP10-4P60372 401 aaPredicted RBP6.91□□□□□ -1.3
TUBE1-210ENST00000604967 REG3AQ06141 175 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 Q0VG73 95 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 TMEM97Q5BJF2 176 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 RMI2Q96E14 147 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 C1orf43Q9BWL3 253 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
TUBE1-210ENST00000604967 FLG2Q5D862 2391 aaPredicted RBP6.91□□□□□ -1.3
TUBE1-210ENST00000604967 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.9□□□□□ -1.3
TUBE1-210ENST00000604967 A0A1B0GUT8 65 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 A0A1B0GUV1 79 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 IGKV2-29A2NJV5 120 aaPredicted RBP6.9□□□□□ -1.3
TUBE1-210ENST00000604967 SDHAF1A6NFY7 115 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 TSHBP01222 138 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 HLA-DQA1P01909 254 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 RAB4AP20338 218 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 MIAQ16674 131 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 SCXQ7RTU7 201 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 AMN1Q8IY45 258 aa6.9□□□□□ -1.3
TUBE1-210ENST00000604967 TRBV6-5A0A0K0K1A5 114 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 NCR2O95944 276 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 CRPP02741 224 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 AMTP48728 403 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 COTL1Q14019 142 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 TMEM241Q24JQ0 296 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 KCNIP4Q6PIL6 250 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 NRACQ8N912 160 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 FRZBQ92765 325 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 TMEM191AQ9H0A3 160 aa6.89□□□□□ -1.31
TUBE1-210ENST00000604967 PKHD1L1Q86WI1 4243 aa6.88□□□□□ -1.31
TUBE1-210ENST00000604967 ESDP10768 282 aa6.88□□□□□ -1.31
TUBE1-210ENST00000604967 POLR2KP53803 58 aaKnown RBP6.88□□□□□ -1.31
TUBE1-210ENST00000604967 ADIRFQ15847 76 aa6.88□□□□□ -1.31
TUBE1-210ENST00000604967 TMEM242Q9NWH2 141 aa6.88□□□□□ -1.31
TUBE1-210ENST00000604967 SMIM27A0A1W2PRY6 76 aa6.87□□□□□ -1.31
TUBE1-210ENST00000604967 INAFM2P0DMQ5 153 aa6.87□□□□□ -1.31
TUBE1-210ENST00000604967 PKIAP61925 76 aa6.87□□□□□ -1.31
TUBE1-210ENST00000604967 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
TUBE1-210ENST00000604967 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.87□□□□□ -1.31
TUBE1-210ENST00000604967 NAT8Q9UHE5 227 aa6.87□□□□□ -1.31
TUBE1-210ENST00000604967 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.87□□□□□ -1.31
TUBE1-210ENST00000604967 LRP1Q07954 4544 aaKnown RBP6.86□□□□□ -1.31
TUBE1-210ENST00000604967 FGF6P10767 208 aa6.86□□□□□ -1.31
TUBE1-210ENST00000604967 MRPL51Q4U2R6 128 aaKnown RBP6.86□□□□□ -1.31
TUBE1-210ENST00000604967 FAM74A3Q4VXF1 159 aa6.86□□□□□ -1.31
TUBE1-210ENST00000604967 CIRBP-AS1Q8TBR5 109 aa6.86□□□□□ -1.31
TUBE1-210ENST00000604967 CHAC1Q9BUX1 264 aa6.86□□□□□ -1.31
TUBE1-210ENST00000604967 A0A1B0GXF2 115 aa6.85□□□□□ -1.31
TUBE1-210ENST00000604967 I3L3M4 83 aa6.85□□□□□ -1.31
TUBE1-210ENST00000604967 SDIM1Q6ZPB5 146 aa6.85□□□□□ -1.31
TUBE1-210ENST00000604967 LINC00528Q8N1L1 170 aa6.85□□□□□ -1.31
TUBE1-210ENST00000604967 FAM104AQ969W3 186 aa6.85□□□□□ -1.31
TUBE1-210ENST00000604967 IGKV3OR2-268A0A0C4DH90 116 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 TRBV27A0A0K0K1C4 114 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 GAGE12HA6NDE8 117 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 APCSP02743 223 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 IFITM2Q01629 132 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 PEA15Q15121 130 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 FAM104BQ5XKR9 115 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 SMIM15Q7Z3B0 74 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 C9orf163Q8N9P6 203 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 MRAP2Q96G30 205 aa6.84□□□□□ -1.31
TUBE1-210ENST00000604967 TRAV8-4A0A0B4J246 113 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 UBE2L6O14933 153 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 PMCHP20382 165 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 CAMPP49913 170 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 FOXI1Q12951 378 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 RIGQ13278 110 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 CHCHD10Q8WYQ3 142 aaPredicted RBP6.83□□□□□ -1.32
TUBE1-210ENST00000604967 ST20Q9HBF5 79 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 NAT8BQ9UHF3 227 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 FAT3Q8TDW7 4589 aa6.83□□□□□ -1.32
TUBE1-210ENST00000604967 CHTF8P0CG12 524 aa6.82□□□□□ -1.32
TUBE1-210ENST00000604967 HNRNPA3P51991 378 aaKnown RBP6.82□□□□□ -1.32
TUBE1-210ENST00000604967 CNBPP62633 177 aaKnown RBP6.82□□□□□ -1.32
TUBE1-210ENST00000604967 C14orf177Q52M58 125 aa6.82□□□□□ -1.32
TUBE1-210ENST00000604967 MRPL54Q6P161 138 aaKnown RBP6.82□□□□□ -1.32
TUBE1-210ENST00000604967 RNASEKQ6P5S7 137 aaKnown RBP6.82□□□□□ -1.32
TUBE1-210ENST00000604967 SMDT1Q9H4I9 107 aa6.82□□□□□ -1.32
TUBE1-210ENST00000604967 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
TUBE1-210ENST00000604967 hDV102S1A0JD36 115 aa6.81□□□□□ -1.32
TUBE1-210ENST00000604967 FAM229AH3BQW9 127 aa6.81□□□□□ -1.32
TUBE1-210ENST00000604967 H7C423 109 aa6.81□□□□□ -1.32
TUBE1-210ENST00000604967 SUMO2P61956 95 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.2 ms