RNA–Protein interactions for RNA: ENST00000603722.1

TUBE1-206, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 613 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-206ENST00000603722 GATD1Q8NB37 220 aa10.65□□□□□ -0.7
TUBE1-206ENST00000603722 C20orf203Q8NBC4 194 aa10.65□□□□□ -0.7
TUBE1-206ENST00000603722 SRRM2Q9UQ35 2752 aaKnown RBP10.64□□□□□ -0.71
TUBE1-206ENST00000603722 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
TUBE1-206ENST00000603722 UBE2L6O14933 153 aa10.64□□□□□ -0.71
TUBE1-206ENST00000603722 FOXA3P55318 350 aaPredicted RBP10.64□□□□□ -0.71
TUBE1-206ENST00000603722 SMIM15Q7Z3B0 74 aa10.64□□□□□ -0.71
TUBE1-206ENST00000603722 CHAC1Q9BUX1 264 aa10.64□□□□□ -0.71
TUBE1-206ENST00000603722 PLA2G1BP04054 148 aaKnown RBP10.63□□□□□ -0.71
TUBE1-206ENST00000603722 PRSS1P07477 247 aa10.63□□□□□ -0.71
TUBE1-206ENST00000603722 FAM231DQ6ZW35 169 aa10.63□□□□□ -0.71
TUBE1-206ENST00000603722 CIRBP-AS1Q8TBR5 109 aa10.63□□□□□ -0.71
TUBE1-206ENST00000603722 EIF5A2Q9GZV4 153 aaKnown RBP10.63□□□□□ -0.71
TUBE1-206ENST00000603722 GFRA4Q9GZZ7 299 aa10.63□□□□□ -0.71
TUBE1-206ENST00000603722 A0A1B0GUV1 79 aa10.62□□□□□ -0.71
TUBE1-206ENST00000603722 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
TUBE1-206ENST00000603722 A8MWL6 223 aa10.61□□□□□ -0.71
TUBE1-206ENST00000603722 SMIM7Q9BQ49 75 aa10.61□□□□□ -0.71
TUBE1-206ENST00000603722 TRAV8-4A0A0B4J246 113 aa10.6□□□□□ -0.71
TUBE1-206ENST00000603722 CT83Q5H943 113 aa10.6□□□□□ -0.71
TUBE1-206ENST00000603722 LINC01551Q86U37 167 aa10.6□□□□□ -0.71
TUBE1-206ENST00000603722 FAM210AQ96ND0 272 aa10.6□□□□□ -0.71
TUBE1-206ENST00000603722 A0A1B0GVG6 124 aa10.59□□□□□ -0.71
TUBE1-206ENST00000603722 DGAT2L7PQ6IED9 249 aa10.59□□□□□ -0.71
TUBE1-206ENST00000603722 BORCS7Q96B45 105 aa10.59□□□□□ -0.71
TUBE1-206ENST00000603722 ZNF727A8MUV8 499 aa10.58□□□□□ -0.72
TUBE1-206ENST00000603722 TEX261Q6UWH6 196 aa10.58□□□□□ -0.72
TUBE1-206ENST00000603722 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.57□□□□□ -0.72
TUBE1-206ENST00000603722 hDV102S1A0JD36 115 aa10.57□□□□□ -0.72
TUBE1-206ENST00000603722 IGKV2-29A2NJV5 120 aaPredicted RBP10.57□□□□□ -0.72
TUBE1-206ENST00000603722 SDHAF1A6NFY7 115 aa10.57□□□□□ -0.72
TUBE1-206ENST00000603722 APCSP02743 223 aa10.57□□□□□ -0.72
TUBE1-206ENST00000603722 SRP19P09132 144 aaKnown RBP10.57□□□□□ -0.72
TUBE1-206ENST00000603722 C9orf163Q8N9P6 203 aa10.57□□□□□ -0.72
TUBE1-206ENST00000603722 CLRN3Q8NCR9 226 aa10.57□□□□□ -0.72
TUBE1-206ENST00000603722 IGKV3OR2-268A0A0C4DH90 116 aa10.56□□□□□ -0.72
TUBE1-206ENST00000603722 HIGD1CA8MV81 97 aa10.56□□□□□ -0.72
TUBE1-206ENST00000603722 NDUFS6O75380 124 aaKnown RBP10.56□□□□□ -0.72
TUBE1-206ENST00000603722 NCR2O95944 276 aa10.56□□□□□ -0.72
TUBE1-206ENST00000603722 AMMECR1LQ6DCA0 310 aa10.56□□□□□ -0.72
TUBE1-206ENST00000603722 TSKUQ8WUA8 353 aa10.56□□□□□ -0.72
TUBE1-206ENST00000603722 GAS8-AS1O95177 125 aa10.55□□□□□ -0.72
TUBE1-206ENST00000603722 RNASEKQ6P5S7 137 aaKnown RBP10.55□□□□□ -0.72
TUBE1-206ENST00000603722 OSTCQ9NRP0 149 aa10.55□□□□□ -0.72
TUBE1-206ENST00000603722 DMBT1Q9UGM3 2413 aaPredicted RBP10.55□□□□□ -0.72
TUBE1-206ENST00000603722 A0A1B0GUT8 65 aa10.54□□□□□ -0.72
TUBE1-206ENST00000603722 GAGE12HA6NDE8 117 aa10.54□□□□□ -0.72
TUBE1-206ENST00000603722 J3QL48 77 aa10.54□□□□□ -0.72
TUBE1-206ENST00000603722 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.54□□□□□ -0.72
TUBE1-206ENST00000603722 TRBV6-5A0A0K0K1A5 114 aa10.53□□□□□ -0.72
TUBE1-206ENST00000603722 PANO1I0J062 215 aa10.53□□□□□ -0.72
TUBE1-206ENST00000603722 I3L3M4 83 aa10.53□□□□□ -0.72
TUBE1-206ENST00000603722 FGF6P10767 208 aa10.53□□□□□ -0.72
TUBE1-206ENST00000603722 PMCHP20382 165 aa10.53□□□□□ -0.72
TUBE1-206ENST00000603722 KRTAP10-4P60372 401 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-206ENST00000603722 CNBPP62633 177 aaKnown RBP10.53□□□□□ -0.72
TUBE1-206ENST00000603722 TMEM191AQ9H0A3 160 aa10.53□□□□□ -0.72
TUBE1-206ENST00000603722 FLG2Q5D862 2391 aaPredicted RBP10.53□□□□□ -0.72
TUBE1-206ENST00000603722 FAM231BA6NCW3 169 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 H7C423 109 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 SDIM1Q6ZPB5 146 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 AMN1Q8IY45 258 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 ST20Q9HBF5 79 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 AP5S1Q9NUS5 200 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 TMEM242Q9NWH2 141 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 V9GYV3 84 aa10.52□□□□□ -0.73
TUBE1-206ENST00000603722 TSHBP01222 138 aa10.51□□□□□ -0.73
TUBE1-206ENST00000603722 C15orf56Q8N910 161 aa10.51□□□□□ -0.73
TUBE1-206ENST00000603722 ISOC2Q96AB3 205 aa10.51□□□□□ -0.73
TUBE1-206ENST00000603722 LRP1Q07954 4544 aaKnown RBP10.5□□□□□ -0.73
TUBE1-206ENST00000603722 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
TUBE1-206ENST00000603722 SLPIP03973 132 aa10.5□□□□□ -0.73
TUBE1-206ENST00000603722 RAB4AP20338 218 aa10.5□□□□□ -0.73
TUBE1-206ENST00000603722 RPS10P46783 165 aaKnown RBP10.5□□□□□ -0.73
TUBE1-206ENST00000603722 TMEM241Q24JQ0 296 aa10.5□□□□□ -0.73
TUBE1-206ENST00000603722 CHCHD10Q8WYQ3 142 aaPredicted RBP10.5□□□□□ -0.73
TUBE1-206ENST00000603722 MRAP2Q96G30 205 aa10.5□□□□□ -0.73
TUBE1-206ENST00000603722 FAT3Q8TDW7 4589 aa10.5□□□□□ -0.73
TUBE1-206ENST00000603722 IGHV3-64A0A075B6Q5 118 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 C9JQL5 133 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 ZNF25P17030 456 aaPredicted RBP10.49□□□□□ -0.73
TUBE1-206ENST00000603722 RPL37AP61513 92 aaKnown RBP10.49□□□□□ -0.73
TUBE1-206ENST00000603722 RPL23P62829 140 aaKnown RBP10.49□□□□□ -0.73
TUBE1-206ENST00000603722 RIGQ13278 110 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 ADIRFQ15847 76 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 HIGD2BQ4VC39 106 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 FAM74A3Q4VXF1 159 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 NUP35Q8NFH5 326 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 TMEM101Q96IK0 257 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 BTF3L4Q96K17 158 aa10.49□□□□□ -0.73
TUBE1-206ENST00000603722 KRTAP29-1A8MX34 341 aaPredicted RBP10.48□□□□□ -0.73
TUBE1-206ENST00000603722 SMKR1H3BMG3 65 aa10.48□□□□□ -0.73
TUBE1-206ENST00000603722 ESDP10768 282 aa10.48□□□□□ -0.73
TUBE1-206ENST00000603722 CFAP161Q6P656 301 aa10.48□□□□□ -0.73
TUBE1-206ENST00000603722 POLR2KP53803 58 aaKnown RBP10.47□□□□□ -0.73
TUBE1-206ENST00000603722 SRSF3P84103 164 aaKnown RBP10.47□□□□□ -0.73
TUBE1-206ENST00000603722 OR5A1Q8NGJ0 315 aa10.47□□□□□ -0.73
TUBE1-206ENST00000603722 NAT8Q9UHE5 227 aa10.47□□□□□ -0.73
TUBE1-206ENST00000603722 NAT8BQ9UHF3 227 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms