RNA–Protein interactions for RNA: ENST00000601983.1

GTPBP3-226, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-226ENST00000601983 COTL1Q14019 142 aa11.78□□□□□ -0.52
GTPBP3-226ENST00000601983 KRTAP26-1Q6PEX3 210 aa11.78□□□□□ -0.52
GTPBP3-226ENST00000601983 SMIM15Q7Z3B0 74 aa11.78□□□□□ -0.52
GTPBP3-226ENST00000601983 C20orf203Q8NBC4 194 aa11.78□□□□□ -0.52
GTPBP3-226ENST00000601983 CLRN3Q8NCR9 226 aa11.78□□□□□ -0.52
GTPBP3-226ENST00000601983 IGLV10-54A0A075B6I4 117 aa11.77□□□□□ -0.53
GTPBP3-226ENST00000601983 BLOC1S1P78537 153 aa11.77□□□□□ -0.53
GTPBP3-226ENST00000601983 C9orf163Q8N9P6 203 aa11.77□□□□□ -0.53
GTPBP3-226ENST00000601983 K7EN84 100 aa11.76□□□□□ -0.53
GTPBP3-226ENST00000601983 AMTP48728 403 aa11.76□□□□□ -0.53
GTPBP3-226ENST00000601983 IGLV4-60A0A075B6I1 120 aa11.75□□□□□ -0.53
GTPBP3-226ENST00000601983 TMEM250H0YL14 139 aa11.75□□□□□ -0.53
GTPBP3-226ENST00000601983 KRTAP29-1A8MX34 341 aaPredicted RBP11.74□□□□□ -0.53
GTPBP3-226ENST00000601983 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
GTPBP3-226ENST00000601983 ALKAL2Q6UX46 152 aa11.74□□□□□ -0.53
GTPBP3-226ENST00000601983 GATD1Q8NB37 220 aa11.74□□□□□ -0.53
GTPBP3-226ENST00000601983 TEX261Q6UWH6 196 aa11.73□□□□□ -0.53
GTPBP3-226ENST00000601983 TRAV26-2A0A0B4J265 109 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 hDV102S1A0JD36 115 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 A8MWL6 223 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 FAM231DQ6ZW35 169 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 GTSF1Q8WW33 167 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 GFRA4Q9GZZ7 299 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 AP5S1Q9NUS5 200 aa11.72□□□□□ -0.53
GTPBP3-226ENST00000601983 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.7□□□□□ -0.54
GTPBP3-226ENST00000601983 NCR2O95944 276 aa11.7□□□□□ -0.54
GTPBP3-226ENST00000601983 CEBPGP53567 150 aa11.7□□□□□ -0.54
GTPBP3-226ENST00000601983 KRTAP10-4P60372 401 aaPredicted RBP11.7□□□□□ -0.54
GTPBP3-226ENST00000601983 CNBPP62633 177 aaKnown RBP11.7□□□□□ -0.54
GTPBP3-226ENST00000601983 LYPD6BQ8NI32 183 aa11.7□□□□□ -0.54
GTPBP3-226ENST00000601983 AMMECR1LQ6DCA0 310 aa11.69□□□□□ -0.54
GTPBP3-226ENST00000601983 SDIM1Q6ZPB5 146 aa11.69□□□□□ -0.54
GTPBP3-226ENST00000601983 BORCS7Q96B45 105 aa11.69□□□□□ -0.54
GTPBP3-226ENST00000601983 RPL39LQ96EH5 51 aaKnown RBP11.69□□□□□ -0.54
GTPBP3-226ENST00000601983 H7C423 109 aa11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 APCSP02743 223 aa11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 FOXA3P55318 350 aaPredicted RBP11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 RPL37AP61513 92 aaKnown RBP11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 CT83Q5H943 113 aa11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 EIF5A2Q9GZV4 153 aaKnown RBP11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.68□□□□□ -0.54
GTPBP3-226ENST00000601983 IGKV3OR2-268A0A0C4DH90 116 aa11.67□□□□□ -0.54
GTPBP3-226ENST00000601983 SDHAF1A6NFY7 115 aa11.67□□□□□ -0.54
GTPBP3-226ENST00000601983 RNASEKQ6P5S7 137 aaKnown RBP11.67□□□□□ -0.54
GTPBP3-226ENST00000601983 CFAP161Q6P656 301 aa11.67□□□□□ -0.54
GTPBP3-226ENST00000601983 IGHV3-64A0A075B6Q5 118 aa11.66□□□□□ -0.54
GTPBP3-226ENST00000601983 GAGE12HA6NDE8 117 aa11.66□□□□□ -0.54
GTPBP3-226ENST00000601983 NDUFS6O75380 124 aaKnown RBP11.66□□□□□ -0.54
GTPBP3-226ENST00000601983 SMIM7Q9BQ49 75 aa11.66□□□□□ -0.54
GTPBP3-226ENST00000601983 I3L3M4 83 aa11.65□□□□□ -0.54
GTPBP3-226ENST00000601983 OXTP01178 125 aa11.65□□□□□ -0.54
GTPBP3-226ENST00000601983 PMCHP20382 165 aa11.65□□□□□ -0.54
GTPBP3-226ENST00000601983 DPH3Q96FX2 82 aa11.65□□□□□ -0.54
GTPBP3-226ENST00000601983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.64□□□□□ -0.55
GTPBP3-226ENST00000601983 IGKV2-29A2NJV5 120 aaPredicted RBP11.64□□□□□ -0.55
GTPBP3-226ENST00000601983 TRBV6-5A0A0K0K1A5 114 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 A0A1B0GUT8 65 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 ZNF727A8MUV8 499 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 PANO1I0J062 215 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 FGF6P10767 208 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 ZNF25P17030 456 aaPredicted RBP11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 BTF3L4Q96K17 158 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 FAM210AQ96ND0 272 aa11.63□□□□□ -0.55
GTPBP3-226ENST00000601983 FAM231BA6NCW3 169 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 HIGD1CA8MV81 97 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 SLPIP03973 132 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 CIRBPQ14011 172 aaKnown RBP11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 CHCHD10Q8WYQ3 142 aaPredicted RBP11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 RNF185Q96GF1 192 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 TMEM101Q96IK0 257 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 TMEM191AQ9H0A3 160 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 ST20Q9HBF5 79 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 OSTCQ9NRP0 149 aa11.62□□□□□ -0.55
GTPBP3-226ENST00000601983 C15orf56Q8N910 161 aa11.61□□□□□ -0.55
GTPBP3-226ENST00000601983 OR5A1Q8NGJ0 315 aa11.6□□□□□ -0.55
GTPBP3-226ENST00000601983 SRP19P09132 144 aaKnown RBP11.59□□□□□ -0.55
GTPBP3-226ENST00000601983 RPS10P46783 165 aaKnown RBP11.59□□□□□ -0.55
GTPBP3-226ENST00000601983 MRAP2Q96G30 205 aa11.59□□□□□ -0.55
GTPBP3-226ENST00000601983 A0A087WYN8 130 aa11.58□□□□□ -0.56
GTPBP3-226ENST00000601983 ESDP10768 282 aa11.58□□□□□ -0.56
GTPBP3-226ENST00000601983 RAB4AP20338 218 aa11.58□□□□□ -0.56
GTPBP3-226ENST00000601983 HIGD2BQ4VC39 106 aa11.58□□□□□ -0.56
GTPBP3-226ENST00000601983 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
GTPBP3-226ENST00000601983 LRP1Q07954 4544 aaKnown RBP11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 GAS8-AS1O95177 125 aa11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 TSHBP01222 138 aa11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 CHTF8P0CG12 524 aa11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 POLR2KP53803 58 aaKnown RBP11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 RIGQ13278 110 aa11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 SERTAD4-AS1Q5TG53 156 aa11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 SPACA4Q8TDM5 124 aa11.57□□□□□ -0.56
GTPBP3-226ENST00000601983 AMN1Q8IY45 258 aa11.56□□□□□ -0.56
GTPBP3-226ENST00000601983 GVQW2A0A096LPI5 108 aaPredicted RBP11.55□□□□□ -0.56
GTPBP3-226ENST00000601983 TRBV27A0A0K0K1C4 114 aa11.55□□□□□ -0.56
GTPBP3-226ENST00000601983 LINC00959A0A1B0GUT2 108 aa11.55□□□□□ -0.56
GTPBP3-226ENST00000601983 PPP1R17O96001 155 aa11.55□□□□□ -0.56
GTPBP3-226ENST00000601983 XCL1P47992 114 aa11.55□□□□□ -0.56
GTPBP3-226ENST00000601983 HNRNPA3P51991 378 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms