RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 MAP1LC3B2A6NCE7 125 aa9.71□□□□□ -0.86
SSBP4-211ENST00000601614 FHITP49789 147 aa9.71□□□□□ -0.86
SSBP4-211ENST00000601614 PTTG1IPP53801 180 aa9.71□□□□□ -0.86
SSBP4-211ENST00000601614 CACNG7P62955 275 aa9.71□□□□□ -0.86
SSBP4-211ENST00000601614 MAP1LC3BQ9GZQ8 125 aa9.71□□□□□ -0.86
SSBP4-211ENST00000601614 PRR4Q16378 134 aa9.7□□□□□ -0.86
SSBP4-211ENST00000601614 Q5BKY6 102 aa9.7□□□□□ -0.86
SSBP4-211ENST00000601614 LINC00299Q6ZSB3 139 aa9.7□□□□□ -0.86
SSBP4-211ENST00000601614 STOML3Q8TAV4 291 aa9.7□□□□□ -0.86
SSBP4-211ENST00000601614 TCEAL7Q9BRU2 100 aa9.7□□□□□ -0.86
SSBP4-211ENST00000601614 SCO2A0A1W2PP80 73 aa9.69□□□□□ -0.86
SSBP4-211ENST00000601614 IGLC6P0CF74 106 aa9.69□□□□□ -0.86
SSBP4-211ENST00000601614 COTL1Q14019 142 aa9.69□□□□□ -0.86
SSBP4-211ENST00000601614 NIT2Q9NQR4 276 aa9.69□□□□□ -0.86
SSBP4-211ENST00000601614 PAGE4O60829 102 aa9.68□□□□□ -0.86
SSBP4-211ENST00000601614 GAGE2BQ13066 116 aa9.68□□□□□ -0.86
SSBP4-211ENST00000601614 C1orf137Q5JT78 98 aa9.68□□□□□ -0.86
SSBP4-211ENST00000601614 BAGE2Q86Y30 109 aa9.68□□□□□ -0.86
SSBP4-211ENST00000601614 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
SSBP4-211ENST00000601614 TPPP3Q9BW30 176 aa9.68□□□□□ -0.86
SSBP4-211ENST00000601614 MT-ND6P03923 174 aa9.67□□□□□ -0.86
SSBP4-211ENST00000601614 XCL1P47992 114 aa9.67□□□□□ -0.86
SSBP4-211ENST00000601614 Q6ZNX1 250 aa9.67□□□□□ -0.86
SSBP4-211ENST00000601614 MED28Q9H204 178 aa9.67□□□□□ -0.86
SSBP4-211ENST00000601614 PKIGQ9Y2B9 76 aa9.67□□□□□ -0.86
SSBP4-211ENST00000601614 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.66□□□□□ -0.86
SSBP4-211ENST00000601614 IGHV1-58A0A0C4DH39 117 aa9.66□□□□□ -0.86
SSBP4-211ENST00000601614 IGKV2-29A2NJV5 120 aaPredicted RBP9.66□□□□□ -0.86
SSBP4-211ENST00000601614 SYCNQ0VAF6 134 aa9.66□□□□□ -0.86
SSBP4-211ENST00000601614 AKR1C8PQ5T2L2 129 aa9.66□□□□□ -0.86
SSBP4-211ENST00000601614 PHF5AQ7RTV0 110 aaKnown RBP9.66□□□□□ -0.86
SSBP4-211ENST00000601614 FER1L6-AS1Q8NA97 138 aa9.66□□□□□ -0.86
SSBP4-211ENST00000601614 NTF3P20783 257 aa9.65□□□□□ -0.86
SSBP4-211ENST00000601614 C9orf116Q5BN46 136 aaPredicted RBP9.65□□□□□ -0.86
SSBP4-211ENST00000601614 AMMECR1LQ6DCA0 310 aa9.65□□□□□ -0.86
SSBP4-211ENST00000601614 RNASEKQ6P5S7 137 aaKnown RBP9.65□□□□□ -0.86
SSBP4-211ENST00000601614 CCL25O15444 150 aa9.64□□□□□ -0.87
SSBP4-211ENST00000601614 S100A9P06702 114 aaKnown RBP9.64□□□□□ -0.87
SSBP4-211ENST00000601614 KRTAP1-4P0C5Y4 121 aa9.64□□□□□ -0.87
SSBP4-211ENST00000601614 BCL2P10415 239 aa9.64□□□□□ -0.87
SSBP4-211ENST00000601614 BORCS7-ASMTA0A0B4J1R7 106 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 LOC107984640A0A0U1RRK4 108 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 LINC00959A0A1B0GUT2 108 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 IGLV7-43P04211 117 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 FGF6P10767 208 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 DEFA1P59665 94 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 OR5A1Q8NGJ0 315 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 DIRC1Q969H9 104 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 ALG5Q9Y673 324 aa9.63□□□□□ -0.87
SSBP4-211ENST00000601614 H0Y9J4 135 aa9.62□□□□□ -0.87
SSBP4-211ENST00000601614 IGLV1-50A0A075B6I6 118 aa9.61□□□□□ -0.87
SSBP4-211ENST00000601614 ZNF561-AS1K7EIQ3 104 aa9.61□□□□□ -0.87
SSBP4-211ENST00000601614 CAMPP49913 170 aa9.61□□□□□ -0.87
SSBP4-211ENST00000601614 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
SSBP4-211ENST00000601614 IGLV4-69A0A075B6H9 119 aa9.6□□□□□ -0.87
SSBP4-211ENST00000601614 TRGC1P0CF51 173 aa9.6□□□□□ -0.87
SSBP4-211ENST00000601614 TMUB2Q71RG4 321 aa9.6□□□□□ -0.87
SSBP4-211ENST00000601614 NUP35Q8NFH5 326 aa9.6□□□□□ -0.87
SSBP4-211ENST00000601614 OR2D3Q8NGH3 330 aa9.6□□□□□ -0.87
SSBP4-211ENST00000601614 RPL39LQ96EH5 51 aaKnown RBP9.6□□□□□ -0.87
SSBP4-211ENST00000601614 A0A1B0GV50 99 aa9.59□□□□□ -0.87
SSBP4-211ENST00000601614 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.59□□□□□ -0.87
SSBP4-211ENST00000601614 H7C423 109 aa9.59□□□□□ -0.87
SSBP4-211ENST00000601614 RPL35P42766 123 aaKnown RBP9.59□□□□□ -0.87
SSBP4-211ENST00000601614 MEF2BQ02080 365 aaPredicted RBP9.59□□□□□ -0.87
SSBP4-211ENST00000601614 LYZL1Q6UWQ5 148 aa9.59□□□□□ -0.87
SSBP4-211ENST00000601614 CYTL1Q9NRR1 136 aa9.59□□□□□ -0.87
SSBP4-211ENST00000601614 C19orf71A6NCJ1 209 aa9.58□□□□□ -0.88
SSBP4-211ENST00000601614 NCR2O95944 276 aa9.58□□□□□ -0.88
SSBP4-211ENST00000601614 APCSP02743 223 aa9.58□□□□□ -0.88
SSBP4-211ENST00000601614 FXYD6-FXYD2A0A087WZ82 144 aa9.57□□□□□ -0.88
SSBP4-211ENST00000601614 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
SSBP4-211ENST00000601614 F2Z2F3 143 aa9.56□□□□□ -0.88
SSBP4-211ENST00000601614 PFDN1O60925 122 aa9.56□□□□□ -0.88
SSBP4-211ENST00000601614 APOMO95445 188 aa9.56□□□□□ -0.88
SSBP4-211ENST00000601614 ZNF25P17030 456 aaPredicted RBP9.56□□□□□ -0.88
SSBP4-211ENST00000601614 RPS20P60866 119 aaKnown RBP9.56□□□□□ -0.88
SSBP4-211ENST00000601614 RPL18AQ02543 176 aaKnown RBP9.56□□□□□ -0.88
SSBP4-211ENST00000601614 SFT2D1Q8WV19 159 aa9.55□□□□□ -0.88
SSBP4-211ENST00000601614 MBD3L1Q8WWY6 194 aa9.55□□□□□ -0.88
SSBP4-211ENST00000601614 ISOC2Q96AB3 205 aa9.55□□□□□ -0.88
SSBP4-211ENST00000601614 OPRPNQ99935 248 aaPredicted RBP9.55□□□□□ -0.88
SSBP4-211ENST00000601614 BATF3Q9NR55 127 aa9.55□□□□□ -0.88
SSBP4-211ENST00000601614 A0A087WZ39 114 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 FAM168BA1KXE4 195 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 SDHAF1A6NFY7 115 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 EIF5AP63241 154 aaKnown RBP9.54□□□□□ -0.88
SSBP4-211ENST00000601614 SS18Q15532 418 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 CENPWQ5EE01 88 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 CAMK2N2Q96S95 79 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 MUC17Q685J3 4493 aa9.54□□□□□ -0.88
SSBP4-211ENST00000601614 G3V3Q6 166 aa9.53□□□□□ -0.88
SSBP4-211ENST00000601614 GIPP09681 153 aaPredicted RBP9.53□□□□□ -0.88
SSBP4-211ENST00000601614 ESDP10768 282 aa9.53□□□□□ -0.88
SSBP4-211ENST00000601614 CTRLP40313 264 aa9.53□□□□□ -0.88
SSBP4-211ENST00000601614 KCNRGQ8N5I3 272 aa9.53□□□□□ -0.88
SSBP4-211ENST00000601614 BTF3L4Q96K17 158 aa9.53□□□□□ -0.88
SSBP4-211ENST00000601614 BCL2L11O43521 198 aa9.52□□□□□ -0.89
SSBP4-211ENST00000601614 IFNA1P01562 189 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms