RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 HYDINQ4G0P3 5121 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 C2orf66Q6UXQ4 117 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 LINC00173Q6ZV60 143 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 OR11H2Q8NH07 326 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 RPL36ALQ969Q0 106 aaKnown RBP8.16□□□□□ -1.1
ZNF548-211ENST00000600927 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 ZNF479Q96JC4 524 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 TIMM17AQ99595 171 aa8.16□□□□□ -1.1
ZNF548-211ENST00000600927 TRAV12-1A0A0B4J245 112 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 TSTD3H0UI37 97 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 GAGE7O76087 117 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 CRYBA4P53673 196 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 DAZ4Q86SG3 579 aaKnown RBP8.15□□□□□ -1.1
ZNF548-211ENST00000600927 Q8NAQ8 132 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 VAMP8Q9BV40 100 aa8.15□□□□□ -1.1
ZNF548-211ENST00000600927 DAZ3Q9NR90 486 aaKnown RBP8.15□□□□□ -1.1
ZNF548-211ENST00000600927 TRAV9-2A0A087WT02 112 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 IGHV3-73A0A0B4J1V6 119 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 Q6ZSN1 163 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 ZNF664Q8N3J9 261 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 SCGB3A1Q96QR1 104 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 PRADC1Q9BSG0 188 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 PYGO1Q9Y3Y4 419 aa8.14□□□□□ -1.11
ZNF548-211ENST00000600927 LCE6AA0A183 80 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 TSHBP01222 138 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 PRSS1P07477 247 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 SMAGPQ0VAQ4 97 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 FHL2Q14192 279 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 TMEM97Q5BJF2 176 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 PAPPA-AS1Q5QFB9 102 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 CDPF1Q6NVV7 123 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 Q6ZN92 141 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 C20orf203Q8NBC4 194 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 GTSF1LQ9H1H1 148 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 DKK2Q9UBU2 259 aa8.13□□□□□ -1.11
ZNF548-211ENST00000600927 NACAE9PAV3 2078 aa8.12□□□□□ -1.11
ZNF548-211ENST00000600927 TRGV4A0A0C4DH28 118 aa8.12□□□□□ -1.11
ZNF548-211ENST00000600927 IGIPA6NJ69 53 aa8.12□□□□□ -1.11
ZNF548-211ENST00000600927 SPART-AS1P0CW21 52 aa8.12□□□□□ -1.11
ZNF548-211ENST00000600927 COTL1Q14019 142 aa8.12□□□□□ -1.11
ZNF548-211ENST00000600927 SLC25A29Q8N8R3 303 aa8.12□□□□□ -1.11
ZNF548-211ENST00000600927 A0A087WX48 190 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 IGHV4-28A0A0C4DH34 117 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 HSBP1L1C9JCN9 74 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 P0DMU3 169 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 FAM231AP0DMU4 169 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 FAM231CP0DMU5 169 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 UBE2D3P61077 147 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 UBE2D2P62837 147 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 ODF1Q14990 250 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 ZNRF2Q8NHG8 242 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 TIMM21Q9BVV7 248 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 PRO0255Q9UI72 69 aa8.11□□□□□ -1.11
ZNF548-211ENST00000600927 NUPR2A6NF83 97 aa8.1□□□□□ -1.11
ZNF548-211ENST00000600927 H7C423 109 aa8.1□□□□□ -1.11
ZNF548-211ENST00000600927 FAM222AQ5U5X8 452 aa8.1□□□□□ -1.11
ZNF548-211ENST00000600927 SPANXA1Q9NS26 97 aa8.1□□□□□ -1.11
ZNF548-211ENST00000600927 HHLA3Q9XRX5 114 aa8.1□□□□□ -1.11
ZNF548-211ENST00000600927 DEFB4AO15263 64 aa8.09□□□□□ -1.11
ZNF548-211ENST00000600927 EMP1P54849 157 aa8.09□□□□□ -1.11
ZNF548-211ENST00000600927 DAD1P61803 113 aa8.09□□□□□ -1.11
ZNF548-211ENST00000600927 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
ZNF548-211ENST00000600927 NEGR1Q7Z3B1 354 aa8.09□□□□□ -1.11
ZNF548-211ENST00000600927 CSDC2Q9Y534 153 aaKnown RBP8.09□□□□□ -1.11
ZNF548-211ENST00000600927 F8VRH5 84 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 DPM2O94777 84 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 IGKCP01834 107 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 ATP5G1P05496 136 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 LINC00694P0DN24 101 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 DEFB130BP0DP73 79 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 DEFB130AP0DP74 79 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 PLNP26678 52 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 NANOS2P60321 138 aaKnown RBP8.08□□□□□ -1.12
ZNF548-211ENST00000600927 PMVKQ15126 192 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 SPATA45Q537H7 98 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 C11orf45Q8TAV5 145 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 BAALCQ8WXS3 180 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 CHCHD7Q9BUK0 85 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 PAM16Q9Y3D7 125 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 VPS13DQ5THJ4 4388 aa8.08□□□□□ -1.12
ZNF548-211ENST00000600927 MRPS36P82909 103 aaKnown RBP8.07□□□□□ -1.12
ZNF548-211ENST00000600927 SH2D6Q7Z4S9 175 aa8.07□□□□□ -1.12
ZNF548-211ENST00000600927 PHLDA1Q8WV24 401 aaPredicted RBP8.07□□□□□ -1.12
ZNF548-211ENST00000600927 MIEN1Q9BRT3 115 aa8.07□□□□□ -1.12
ZNF548-211ENST00000600927 Q9UF83 564 aa8.07□□□□□ -1.12
ZNF548-211ENST00000600927 KMT2AQ03164 3969 aa8.06□□□□□ -1.12
ZNF548-211ENST00000600927 PRSS29PA6NIE9 313 aa8.06□□□□□ -1.12
ZNF548-211ENST00000600927 H0Y8G0 127 aa8.06□□□□□ -1.12
ZNF548-211ENST00000600927 RPL39P62891 51 aaKnown RBP8.06□□□□□ -1.12
ZNF548-211ENST00000600927 MRPL52Q86TS9 123 aaKnown RBP8.06□□□□□ -1.12
ZNF548-211ENST00000600927 UQCR10Q9UDW1 63 aa8.06□□□□□ -1.12
ZNF548-211ENST00000600927 CELA1Q9UNI1 258 aa8.06□□□□□ -1.12
ZNF548-211ENST00000600927 CHTOPQ9Y3Y2 248 aaKnown RBP8.06□□□□□ -1.12
ZNF548-211ENST00000600927 TRAV26-1A0A087WT03 109 aa8.05□□□□□ -1.12
ZNF548-211ENST00000600927 GAGE12JA6NER3 117 aa8.05□□□□□ -1.12
ZNF548-211ENST00000600927 PCP4L1A6NKN8 68 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms