RNA–Protein interactions for RNA: ENST00000600778.3

SOX2-OT-233, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 762 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-233ENST00000600778 RASL11AQ6T310 242 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 UBE2WQ96B02 151 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 RMI2Q96E14 147 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 FAM30AQ9NZY2 134 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 COX11Q9Y6N1 276 aa7.65□□□□□ -1.18
SOX2-OT-233ENST00000600778 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 TRAV26-2A0A0B4J265 109 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 TMEM218A2RU14 115 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 FAM229AH3BQW9 127 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 PNRC1Q12796 327 aaPredicted RBP7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 COMMD7Q86VX2 200 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 CHCHD7Q9BUK0 85 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 NIT2Q9NQR4 276 aa7.64□□□□□ -1.19
SOX2-OT-233ENST00000600778 PPP1R2P9O14990 202 aa7.63□□□□□ -1.19
SOX2-OT-233ENST00000600778 TMEM191AQ9H0A3 160 aa7.63□□□□□ -1.19
SOX2-OT-233ENST00000600778 SRRM2Q9UQ35 2752 aaKnown RBP7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 LINC00862A6NCI5 91 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 MT-ND4LP03901 98 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 Q0VG73 95 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 TMEM97Q5BJF2 176 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 NTM-AS1Q6ZSK4 140 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 Q8N976 141 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 RNF185Q96GF1 192 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 CHCHD5Q9BSY4 110 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 HERC1Q15751 4861 aa7.62□□□□□ -1.19
SOX2-OT-233ENST00000600778 ADCYAP1P18509 176 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 RAB4AP20338 218 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 LINC01620Q4KN68 170 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 MPV17L2Q567V2 206 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 ENHOQ6UWT2 76 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 ANAPC16Q96DE5 110 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 RPL39LQ96EH5 51 aaKnown RBP7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 MYCBP2O75592 4640 aa7.61□□□□□ -1.19
SOX2-OT-233ENST00000600778 F8W036 122 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 GAS8-AS1O95177 125 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 CRPP02741 224 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 ANGP03950 147 aaKnown RBP7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 CAMPP49913 170 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 ATRAIDQ6UW56 229 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 AMN1Q8IY45 258 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 C1orf43Q9BWL3 253 aa7.6□□□□□ -1.19
SOX2-OT-233ENST00000600778 A0A1B0GW15 77 aa7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 PKIAP61925 76 aa7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 GAGE6Q13070 117 aa7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 IQCJQ1A5X6 159 aa7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 MRPL54Q6P161 138 aaKnown RBP7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 MRAP2Q96G30 205 aa7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 SEC11CQ9BY50 192 aa7.59□□□□□ -1.19
SOX2-OT-233ENST00000600778 TRBV25-1A0A075B6N4 114 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 IGHV1-24A0A0C4DH33 117 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 TRBV6-5A0A0K0K1A5 114 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 A0A1B0GXF2 115 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 S100A8P05109 93 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 HBBP68871 147 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 FAM104BQ5XKR9 115 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 Q6ZSA8 131 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
SOX2-OT-233ENST00000600778 RPS10P46783 165 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-233ENST00000600778 COTL1Q14019 142 aa7.57□□□□□ -1.2
SOX2-OT-233ENST00000600778 MRPL51Q4U2R6 128 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-233ENST00000600778 CLPSL2Q6UWE3 100 aa7.57□□□□□ -1.2
SOX2-OT-233ENST00000600778 DEFB104AQ8WTQ1 72 aa7.57□□□□□ -1.2
SOX2-OT-233ENST00000600778 ST20Q9HBF5 79 aa7.57□□□□□ -1.2
SOX2-OT-233ENST00000600778 SDHAF1A6NFY7 115 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 SMKR1H3BMG3 65 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 I3L3M4 83 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 HLA-DQA1P01909 254 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 RBX1P62877 108 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 MIAQ16674 131 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 C14orf177Q52M58 125 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 C10orf91Q5T1B1 145 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 LCE2CQ5TA81 110 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 ATP5L2Q7Z4Y8 100 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 LINC00269Q8N2A0 174 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 TMEM243Q9BU79 118 aa7.56□□□□□ -1.2
SOX2-OT-233ENST00000600778 NCR2O95944 276 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 PPP1R17O96001 155 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 PMCHP20382 165 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 AMTP48728 403 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 POLR2KP53803 58 aaKnown RBP7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 NRACQ8N912 160 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 IMMP2LQ96T52 175 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 CTDSP1Q9GZU7 261 aa7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 CARHSP1Q9Y2V2 147 aaKnown RBP7.55□□□□□ -1.2
SOX2-OT-233ENST00000600778 USP17L23D6RBM5 183 aa7.54□□□□□ -1.2
SOX2-OT-233ENST00000600778 SCXQ7RTU7 201 aa7.54□□□□□ -1.2
SOX2-OT-233ENST00000600778 PRR34Q9NV39 138 aa7.54□□□□□ -1.2
SOX2-OT-233ENST00000600778 C7orf77A4D0Y5 90 aa7.53□□□□□ -1.2
SOX2-OT-233ENST00000600778 VCYO14598 125 aa7.53□□□□□ -1.2
SOX2-OT-233ENST00000600778 PLA2G1BP04054 148 aaKnown RBP7.53□□□□□ -1.2
SOX2-OT-233ENST00000600778 CKS2P33552 79 aa7.53□□□□□ -1.2
SOX2-OT-233ENST00000600778 BTF3L4Q96K17 158 aa7.53□□□□□ -1.2
SOX2-OT-233ENST00000600778 CHAC1Q9BUX1 264 aa7.53□□□□□ -1.2
SOX2-OT-233ENST00000600778 IGLV4-60A0A075B6I1 120 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 IGLV10-54A0A075B6I4 117 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 TRBV24-1A0A075B6N3 115 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 TRBV27A0A0K0K1C4 114 aa7.52□□□□□ -1.21
SOX2-OT-233ENST00000600778 A0A1B0GUV1 79 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms