RNA–Protein interactions for RNA: ENST00000600573.5

PNKP-214, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,602 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-214ENST00000600573 COX8AP10176 69 aa14.3□□□□□ -0.12
PNKP-214ENST00000600573 ZNF479Q96JC4 524 aa14.3□□□□□ -0.12
PNKP-214ENST00000600573 SNHG12Q9BXW3 62 aa14.3□□□□□ -0.12
PNKP-214ENST00000600573 MRPS16Q9Y3D3 137 aaKnown RBP14.3□□□□□ -0.12
PNKP-214ENST00000600573 CHTOPQ9Y3Y2 248 aaKnown RBP14.3□□□□□ -0.12
PNKP-214ENST00000600573 IGIPA6NJ69 53 aa14.29□□□□□ -0.12
PNKP-214ENST00000600573 STPG4Q8N801 248 aa14.29□□□□□ -0.12
PNKP-214ENST00000600573 TRBV6-4A0A1B0GX49 114 aa14.28□□□□□ -0.12
PNKP-214ENST00000600573 K7EQD1 137 aa14.28□□□□□ -0.12
PNKP-214ENST00000600573 RPL39P62891 51 aaKnown RBP14.28□□□□□ -0.12
PNKP-214ENST00000600573 C20orf203Q8NBC4 194 aa14.28□□□□□ -0.12
PNKP-214ENST00000600573 DEFB104AQ8WTQ1 72 aa14.28□□□□□ -0.12
PNKP-214ENST00000600573 C2orf88Q9BSF0 95 aa14.28□□□□□ -0.12
PNKP-214ENST00000600573 COL6A5A8TX70 2615 aa14.28□□□□□ -0.12
PNKP-214ENST00000600573 RPL36AP83881 106 aaKnown RBP14.27□□□□□ -0.12
PNKP-214ENST00000600573 KRTAP21-3Q3LHN1 58 aa14.27□□□□□ -0.12
PNKP-214ENST00000600573 RPL36ALQ969Q0 106 aaKnown RBP14.27□□□□□ -0.12
PNKP-214ENST00000600573 G3V4G9 280 aa14.26□□□□□ -0.13
PNKP-214ENST00000600573 EMP1P54849 157 aa14.26□□□□□ -0.13
PNKP-214ENST00000600573 TRBV7-3A0A075B6L6 115 aa14.26□□□□□ -0.13
PNKP-214ENST00000600573 STAB1Q9NY15 2570 aa14.25□□□□□ -0.13
PNKP-214ENST00000600573 TRGV4A0A0C4DH28 118 aa14.25□□□□□ -0.13
PNKP-214ENST00000600573 TEX48A0A1B0GUV7 120 aa14.25□□□□□ -0.13
PNKP-214ENST00000600573 PRSS29PA6NIE9 313 aa14.25□□□□□ -0.13
PNKP-214ENST00000600573 HHLA3Q9XRX5 114 aa14.25□□□□□ -0.13
PNKP-214ENST00000600573 PMVKQ15126 192 aa14.24□□□□□ -0.13
PNKP-214ENST00000600573 DAZ4Q86SG3 579 aaKnown RBP14.24□□□□□ -0.13
PNKP-214ENST00000600573 DAZ3Q9NR90 486 aaKnown RBP14.24□□□□□ -0.13
PNKP-214ENST00000600573 IGHV4-28A0A0C4DH34 117 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 FGF6P10767 208 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 ZC2HC1BQ5TFG8 222 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 SLC25A29Q8N8R3 303 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 Q8NAQ8 132 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 PRADC1Q9BSG0 188 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 TP73-AS1Q9UF72 201 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 NMUP48645 174 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 COTL1Q14019 142 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 FHL2Q14192 279 aa14.23□□□□□ -0.13
PNKP-214ENST00000600573 DNHD1Q96M86 4753 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 DLEU1O43261 78 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 DEFB130BP0DP73 79 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 DEFB130AP0DP74 79 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 FAM222AQ5U5X8 452 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 ZNRF2Q8NHG8 242 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 Q9UF83 564 aa14.22□□□□□ -0.13
PNKP-214ENST00000600573 NPSP0C0P6 89 aa14.21□□□□□ -0.13
PNKP-214ENST00000600573 SPART-AS1P0CW21 52 aa14.21□□□□□ -0.13
PNKP-214ENST00000600573 PAPPA-AS1Q5QFB9 102 aa14.21□□□□□ -0.13
PNKP-214ENST00000600573 BOD1L2Q8IYS8 172 aa14.21□□□□□ -0.13
PNKP-214ENST00000600573 CST9LQ9H4G1 147 aa14.21□□□□□ -0.13
PNKP-214ENST00000600573 TCTAP57738 103 aa14.2□□□□□ -0.14
PNKP-214ENST00000600573 BATFQ16520 125 aa14.2□□□□□ -0.14
PNKP-214ENST00000600573 PYGO1Q9Y3Y4 419 aa14.2□□□□□ -0.14
PNKP-214ENST00000600573 CMYA5Q8N3K9 4069 aa14.19□□□□□ -0.14
PNKP-214ENST00000600573 UBE2D3P61077 147 aa14.19□□□□□ -0.14
PNKP-214ENST00000600573 UBE2D2P62837 147 aa14.19□□□□□ -0.14
PNKP-214ENST00000600573 PHLDA1Q8WV24 401 aaPredicted RBP14.19□□□□□ -0.14
PNKP-214ENST00000600573 ANK2Q01484 3957 aa14.19□□□□□ -0.14
PNKP-214ENST00000600573 KPRPQ5T749 579 aaPredicted RBP14.19□□□□□ -0.14
PNKP-214ENST00000600573 CHCHD7Q9BUK0 85 aa14.19□□□□□ -0.14
PNKP-214ENST00000600573 C2orf91Q6ZV80 131 aa14.18□□□□□ -0.14
PNKP-214ENST00000600573 SPANXA1Q9NS26 97 aa14.18□□□□□ -0.14
PNKP-214ENST00000600573 IGLV4-69A0A075B6H9 119 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 IGLV4-3A0A075B6K6 122 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 IGKV2D-26A0A0A0MRZ7 120 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 IGHV3-38A0A0C4DH36 116 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 DAD1P61803 113 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 SMAGPQ0VAQ4 97 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 TMEM97Q5BJF2 176 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 GTSF1LQ9H1H1 148 aa14.17□□□□□ -0.14
PNKP-214ENST00000600573 SIVA1O15304 175 aa14.16□□□□□ -0.14
PNKP-214ENST00000600573 HINT1P49773 126 aaPredicted RBP14.16□□□□□ -0.14
PNKP-214ENST00000600573 CRYBA4P53673 196 aa14.16□□□□□ -0.14
PNKP-214ENST00000600573 PCP2Q8IVA1 136 aa14.16□□□□□ -0.14
PNKP-214ENST00000600573 PRO0255Q9UI72 69 aa14.16□□□□□ -0.14
PNKP-214ENST00000600573 COL5A1-AS1Q5SY13 56 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 GAGE12JA6NER3 117 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 C11orf86A6NJI1 115 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 GAGE1Q13065 139 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 GAGE4Q13068 117 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 GAGE5Q13069 117 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 GAGE13Q4V321 117 aa14.15□□□□□ -0.14
PNKP-214ENST00000600573 HERVK_113P61574 105 aa14.14□□□□□ -0.15
PNKP-214ENST00000600573 VCX2Q9H322 139 aa14.14□□□□□ -0.15
PNKP-214ENST00000600573 ATP5G1P05496 136 aa14.13□□□□□ -0.15
PNKP-214ENST00000600573 OPRPNQ99935 248 aaPredicted RBP14.13□□□□□ -0.15
PNKP-214ENST00000600573 C11orf68Q9H3H3 251 aaKnown RBP14.13□□□□□ -0.15
PNKP-214ENST00000600573 UBE2D4Q9Y2X8 147 aa14.13□□□□□ -0.15
PNKP-214ENST00000600573 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.12□□□□□ -0.15
PNKP-214ENST00000600573 IGKV2-29A2NJV5 120 aaPredicted RBP14.12□□□□□ -0.15
PNKP-214ENST00000600573 NFE4Q86UQ8 179 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 TIMM21Q9BVV7 248 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 A0A1B0GV90 55 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 E9PLD3 99 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 DEFB4AO15263 64 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 MPV17L2Q567V2 206 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 AMELXQ99217 191 aa14.12□□□□□ -0.15
PNKP-214ENST00000600573 H7C423 109 aa14.11□□□□□ -0.15
PNKP-214ENST00000600573 LINC00694P0DN24 101 aa14.11□□□□□ -0.15
PNKP-214ENST00000600573 CHAC1Q9BUX1 264 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms