RNA–Protein interactions for RNA: ENST00000599642.1

KHSRP-211, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 2

Gene KHSRP, Length 428 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-211ENST00000599642 C1orf196B1AJZ1 125 aa12.8□□□□□ -0.36
KHSRP-211ENST00000599642 FCER1GP30273 86 aa12.8□□□□□ -0.36
KHSRP-211ENST00000599642 LGALS9CQ6DKI2 356 aa12.8□□□□□ -0.36
KHSRP-211ENST00000599642 CHCHD7Q9BUK0 85 aa12.8□□□□□ -0.36
KHSRP-211ENST00000599642 IGHV3-38A0A0C4DH36 116 aa12.78□□□□□ -0.36
KHSRP-211ENST00000599642 TSHBP01222 138 aa12.78□□□□□ -0.36
KHSRP-211ENST00000599642 LINC00614P0C842 121 aa12.78□□□□□ -0.36
KHSRP-211ENST00000599642 ESDP10768 282 aa12.78□□□□□ -0.36
KHSRP-211ENST00000599642 IFI27P40305 119 aaPredicted RBP12.78□□□□□ -0.36
KHSRP-211ENST00000599642 NTM-AS1Q6ZSK4 140 aa12.78□□□□□ -0.36
KHSRP-211ENST00000599642 CHCHD1Q96BP2 118 aaKnown RBP12.78□□□□□ -0.36
KHSRP-211ENST00000599642 LOC389332A0A1B0GUA5 103 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 AMTP48728 403 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 LAGE3Q14657 143 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 FA2HQ7L5A8 372 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 TMEM243Q9BU79 118 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 AP5S1Q9NUS5 200 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 LINC00588Q9Y4M8 146 aa12.77□□□□□ -0.37
KHSRP-211ENST00000599642 CSMD3Q7Z407 3707 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BKO60814 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BJP06899 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 ZNF25P17030 456 aaPredicted RBP12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BOP23527 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BBP33778 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BDP58876 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BCP62807 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST2H2BEQ16778 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.75□□□□□ -0.37
KHSRP-211ENST00000599642 UBE2DNLQ8IWF7 75 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 DYNC2H1Q8NCM8 4307 aaKnown RBP12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BHQ93079 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BNQ99877 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 HIST1H2BMQ99879 126 aa12.75□□□□□ -0.37
KHSRP-211ENST00000599642 A0A1B0GUV1 79 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 UBE2L6O14933 153 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 NPSP0C0P6 89 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 NIT1Q86X76 327 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 C20orf203Q8NBC4 194 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 TIMM21Q9BVV7 248 aa12.74□□□□□ -0.37
KHSRP-211ENST00000599642 CSDC2Q9Y534 153 aaKnown RBP12.74□□□□□ -0.37
KHSRP-211ENST00000599642 MRPL52Q86TS9 123 aaKnown RBP12.73□□□□□ -0.37
KHSRP-211ENST00000599642 SIVA1O15304 175 aa12.72□□□□□ -0.37
KHSRP-211ENST00000599642 DNAH10OSP0CZ25 163 aa12.72□□□□□ -0.37
KHSRP-211ENST00000599642 LINC01556Q5JQF7 62 aa12.72□□□□□ -0.37
KHSRP-211ENST00000599642 COA6Q5JTJ3 125 aaKnown RBP12.72□□□□□ -0.37
KHSRP-211ENST00000599642 CHCHD5Q9BSY4 110 aa12.71□□□□□ -0.37
KHSRP-211ENST00000599642 PYGO1Q9Y3Y4 419 aa12.71□□□□□ -0.37
KHSRP-211ENST00000599642 TRAV9-2A0A087WT02 112 aa12.7□□□□□ -0.38
KHSRP-211ENST00000599642 BTF3P20290 206 aaKnown RBP12.7□□□□□ -0.38
KHSRP-211ENST00000599642 C10orf126Q8N4M7 172 aa12.7□□□□□ -0.38
KHSRP-211ENST00000599642 Q9H8V8 135 aa12.7□□□□□ -0.38
KHSRP-211ENST00000599642 CYSLTR1Q9Y271 337 aa12.7□□□□□ -0.38
KHSRP-211ENST00000599642 A0A087WX48 190 aa12.69□□□□□ -0.38
KHSRP-211ENST00000599642 URB1-AS1Q96HZ7 61 aa12.69□□□□□ -0.38
KHSRP-211ENST00000599642 SPANXA1Q9NS26 97 aa12.69□□□□□ -0.38
KHSRP-211ENST00000599642 HSBP1O75506 76 aa12.68□□□□□ -0.38
KHSRP-211ENST00000599642 RNASEKQ6P5S7 137 aaKnown RBP12.68□□□□□ -0.38
KHSRP-211ENST00000599642 LINC00476Q8WZB0 136 aa12.68□□□□□ -0.38
KHSRP-211ENST00000599642 TOMM6Q96B49 74 aa12.68□□□□□ -0.38
KHSRP-211ENST00000599642 HBDP02042 147 aa12.67□□□□□ -0.38
KHSRP-211ENST00000599642 TTC32Q5I0X7 151 aa12.67□□□□□ -0.38
KHSRP-211ENST00000599642 PAPPA-AS1Q5QFB9 102 aa12.67□□□□□ -0.38
KHSRP-211ENST00000599642 C2orf66Q6UXQ4 117 aa12.67□□□□□ -0.38
KHSRP-211ENST00000599642 TMEM101Q96IK0 257 aa12.67□□□□□ -0.38
KHSRP-211ENST00000599642 TMEM262E9PQX1 116 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 FGF6P10767 208 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 MRPS36P82909 103 aaKnown RBP12.66□□□□□ -0.38
KHSRP-211ENST00000599642 AMMECR1LQ6DCA0 310 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 WFDC10BQ8IUB3 73 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 TIMM17AQ99595 171 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 UBE2D4Q9Y2X8 147 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 STARD9Q9P2P6 4700 aa12.66□□□□□ -0.38
KHSRP-211ENST00000599642 SERF1AO75920 110 aa12.65□□□□□ -0.38
KHSRP-211ENST00000599642 PACRGQ96M98 296 aaPredicted RBP12.65□□□□□ -0.38
KHSRP-211ENST00000599642 GAGE6Q13070 117 aa12.64□□□□□ -0.39
KHSRP-211ENST00000599642 DGAT2L7PQ6IED9 249 aa12.64□□□□□ -0.39
KHSRP-211ENST00000599642 ERASQ7Z444 233 aa12.64□□□□□ -0.39
KHSRP-211ENST00000599642 TMEM141Q96I45 108 aa12.64□□□□□ -0.39
KHSRP-211ENST00000599642 TENM2Q9NT68 2774 aa12.64□□□□□ -0.39
KHSRP-211ENST00000599642 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.63□□□□□ -0.39
KHSRP-211ENST00000599642 IGKV2-29A2NJV5 120 aaPredicted RBP12.63□□□□□ -0.39
KHSRP-211ENST00000599642 RBX1P62877 108 aa12.63□□□□□ -0.39
KHSRP-211ENST00000599642 OR5A1Q8NGJ0 315 aa12.63□□□□□ -0.39
KHSRP-211ENST00000599642 CCL25O15444 150 aa12.62□□□□□ -0.39
KHSRP-211ENST00000599642 ATP5LO75964 103 aa12.62□□□□□ -0.39
KHSRP-211ENST00000599642 S100A6P06703 90 aa12.62□□□□□ -0.39
KHSRP-211ENST00000599642 LINC00310P59036 64 aa12.62□□□□□ -0.39
KHSRP-211ENST00000599642 MPV17L2Q567V2 206 aa12.62□□□□□ -0.39
KHSRP-211ENST00000599642 IGIPA6NJ69 53 aa12.61□□□□□ -0.39
KHSRP-211ENST00000599642 LY6G6CO95867 125 aa12.61□□□□□ -0.39
KHSRP-211ENST00000599642 NDUFA6P56556 154 aa12.61□□□□□ -0.39
KHSRP-211ENST00000599642 RPL39P62891 51 aaKnown RBP12.61□□□□□ -0.39
KHSRP-211ENST00000599642 PDZD11Q5EBL8 140 aa12.61□□□□□ -0.39
KHSRP-211ENST00000599642 CDC42SE2Q9NRR3 84 aa12.61□□□□□ -0.39
KHSRP-211ENST00000599642 A0A096LNJ9 63 aa12.6□□□□□ -0.39
KHSRP-211ENST00000599642 IBA57-AS1B1ANH7 110 aa12.6□□□□□ -0.39
KHSRP-211ENST00000599642 ZNF664Q8N3J9 261 aa12.6□□□□□ -0.39
KHSRP-211ENST00000599642 DEFB104AQ8WTQ1 72 aa12.6□□□□□ -0.39
KHSRP-211ENST00000599642 SCGB3A1Q96QR1 104 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms