RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 GAGE12JA6NER3 117 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BKO60814 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BJP06899 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 OR5AL1P0C617 328 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BOP23527 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BBP33778 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BDP58876 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BCP62807 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 GAGE1Q13065 139 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 GAGE4Q13068 117 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 GAGE5Q13069 117 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST2H2BEQ16778 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 GAGE13Q4V321 117 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.7□□□□□ -0.86
IRF3-223ENST00000599223 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 DAZ4Q86SG3 579 aaKnown RBP9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BHQ93079 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 PTH2Q96A98 100 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 DNAJC30Q96LL9 226 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BNQ99877 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 HIST1H2BMQ99879 126 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 JPT2Q9H910 190 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 DAZ3Q9NR90 486 aaKnown RBP9.7□□□□□ -0.86
IRF3-223ENST00000599223 PHLDA3Q9Y5J5 127 aa9.7□□□□□ -0.86
IRF3-223ENST00000599223 H3BVH4 76 aa9.69□□□□□ -0.86
IRF3-223ENST00000599223 CIDEAO60543 219 aa9.69□□□□□ -0.86
IRF3-223ENST00000599223 NDUFA6P56556 154 aa9.69□□□□□ -0.86
IRF3-223ENST00000599223 LINC01620Q4KN68 170 aa9.69□□□□□ -0.86
IRF3-223ENST00000599223 UFSP1Q6NVU6 142 aa9.69□□□□□ -0.86
IRF3-223ENST00000599223 SAMD10Q9BYL1 202 aa9.69□□□□□ -0.86
IRF3-223ENST00000599223 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.68□□□□□ -0.86
IRF3-223ENST00000599223 SSTP61278 116 aa9.68□□□□□ -0.86
IRF3-223ENST00000599223 DNLZQ5SXM8 178 aa9.68□□□□□ -0.86
IRF3-223ENST00000599223 LINC00528Q8N1L1 170 aa9.68□□□□□ -0.86
IRF3-223ENST00000599223 C14orf178Q8N769 122 aaPredicted RBP9.68□□□□□ -0.86
IRF3-223ENST00000599223 CNFNQ9BYD5 112 aa9.68□□□□□ -0.86
IRF3-223ENST00000599223 SNAI2O43623 268 aa9.67□□□□□ -0.86
IRF3-223ENST00000599223 NTF3P20783 257 aa9.67□□□□□ -0.86
IRF3-223ENST00000599223 GATD1Q8NB37 220 aa9.67□□□□□ -0.86
IRF3-223ENST00000599223 SYT8Q8NBV8 401 aa9.67□□□□□ -0.86
IRF3-223ENST00000599223 SSBP4Q9BWG4 385 aaPredicted RBP9.67□□□□□ -0.86
IRF3-223ENST00000599223 FAT3Q8TDW7 4589 aa9.66□□□□□ -0.86
IRF3-223ENST00000599223 PHOX2AO14813 284 aa9.66□□□□□ -0.86
IRF3-223ENST00000599223 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
IRF3-223ENST00000599223 TM2D2Q9BX73 214 aa9.66□□□□□ -0.86
IRF3-223ENST00000599223 TMEM191AQ9H0A3 160 aa9.66□□□□□ -0.86
IRF3-223ENST00000599223 PKHD1L1Q86WI1 4243 aa9.66□□□□□ -0.86
IRF3-223ENST00000599223 MUC21A0A0G2JKD1 596 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 MUC21A0A140T8X8 626 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 A8MWV9 139 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 S100A2P29034 98 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 SNRPEP62304 92 aaKnown RBP9.65□□□□□ -0.86
IRF3-223ENST00000599223 KIAA1644Q3SXP7 199 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 SCXQ7RTU7 201 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 BAGE3Q86Y29 109 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 OR10AG1Q8NH19 301 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 BAALCQ8WXS3 180 aa9.65□□□□□ -0.86
IRF3-223ENST00000599223 TRAV8-3A0A0A6YYJ7 113 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 J3QL48 77 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 M0R381 172 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 SMIM17P0DL12 118 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 DMRTA1Q5VZB9 504 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 AP1S3Q96PC3 154 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 HMCN2Q8NDA2 5059 aa9.64□□□□□ -0.87
IRF3-223ENST00000599223 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
IRF3-223ENST00000599223 KRTAP10-4P60372 401 aaPredicted RBP9.63□□□□□ -0.87
IRF3-223ENST00000599223 Q0VG73 95 aa9.63□□□□□ -0.87
IRF3-223ENST00000599223 PIK3CD-AS1Q5SR53 167 aa9.63□□□□□ -0.87
IRF3-223ENST00000599223 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
IRF3-223ENST00000599223 PPBPP02775 128 aa9.62□□□□□ -0.87
IRF3-223ENST00000599223 PLA2G1BP04054 148 aaKnown RBP9.62□□□□□ -0.87
IRF3-223ENST00000599223 NIT1Q86X76 327 aa9.62□□□□□ -0.87
IRF3-223ENST00000599223 A0A087WWL8 130 aa9.61□□□□□ -0.87
IRF3-223ENST00000599223 CKS2P33552 79 aa9.61□□□□□ -0.87
IRF3-223ENST00000599223 COA6Q5JTJ3 125 aaKnown RBP9.61□□□□□ -0.87
IRF3-223ENST00000599223 FAM74A4Q5TZK3 123 aa9.61□□□□□ -0.87
IRF3-223ENST00000599223 AMN1Q8IY45 258 aa9.61□□□□□ -0.87
IRF3-223ENST00000599223 ORMDL3Q8N138 153 aa9.61□□□□□ -0.87
IRF3-223ENST00000599223 ALKBH7Q9BT30 221 aaPredicted RBP9.61□□□□□ -0.87
IRF3-223ENST00000599223 LOC105371267A0A1B0GV96 52 aa9.6□□□□□ -0.87
IRF3-223ENST00000599223 KRTAP29-1A8MX34 341 aaPredicted RBP9.6□□□□□ -0.87
IRF3-223ENST00000599223 DPH3P1Q9H4G8 78 aa9.6□□□□□ -0.87
IRF3-223ENST00000599223 KLK12Q9UKR0 248 aa9.6□□□□□ -0.87
IRF3-223ENST00000599223 IGKV2D-24A0A075B6R9 120 aa9.59□□□□□ -0.87
IRF3-223ENST00000599223 RHODO00212 210 aa9.59□□□□□ -0.87
IRF3-223ENST00000599223 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
IRF3-223ENST00000599223 LAMTOR2Q9Y2Q5 125 aa9.59□□□□□ -0.87
IRF3-223ENST00000599223 D6R8Y8 96 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 PPP1R17O96001 155 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 RAB4AP20338 218 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 AKR1D1P51857 326 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
IRF3-223ENST00000599223 C18orf32Q8TCD1 76 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 TMEM18Q96B42 140 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 MRAP2Q96G30 205 aa9.58□□□□□ -0.88
IRF3-223ENST00000599223 MGPP08493 103 aa9.57□□□□□ -0.88
IRF3-223ENST00000599223 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
IRF3-223ENST00000599223 DEFB104AQ8WTQ1 72 aa9.57□□□□□ -0.88
IRF3-223ENST00000599223 UBE2WQ96B02 151 aa9.57□□□□□ -0.88
IRF3-223ENST00000599223 CHAC1Q9BUX1 264 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms