RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 DNAH9Q9NYC9 4486 aa16.35■□□□□ 0.21
SYMPK-212ENST00000598896 F5H768 121 aa16.35■□□□□ 0.21
SYMPK-212ENST00000598896 C2orf66Q6UXQ4 117 aa16.35■□□□□ 0.21
SYMPK-212ENST00000598896 Q6ZTC4 211 aa16.35■□□□□ 0.21
SYMPK-212ENST00000598896 ZMAT4Q9H898 229 aa16.35■□□□□ 0.21
SYMPK-212ENST00000598896 COL7A1Q02388 2944 aa16.35■□□□□ 0.21
SYMPK-212ENST00000598896 TOMM6Q96B49 74 aa16.34■□□□□ 0.21
SYMPK-212ENST00000598896 A0A0J9YY99 117 aa16.33■□□□□ 0.21
SYMPK-212ENST00000598896 GYPEP15421 78 aa16.33■□□□□ 0.21
SYMPK-212ENST00000598896 RPL39P62891 51 aaKnown RBP16.33■□□□□ 0.21
SYMPK-212ENST00000598896 MEGF8Q7Z7M0 2845 aa16.33■□□□□ 0.2
SYMPK-212ENST00000598896 PAX4O43316 350 aa16.33■□□□□ 0.2
SYMPK-212ENST00000598896 JOSD1Q15040 202 aaPredicted RBP16.33■□□□□ 0.2
SYMPK-212ENST00000598896 DAZ4Q86SG3 579 aaKnown RBP16.33■□□□□ 0.2
SYMPK-212ENST00000598896 DAZ3Q9NR90 486 aaKnown RBP16.33■□□□□ 0.2
SYMPK-212ENST00000598896 TRAV26-1A0A087WT03 109 aa16.32■□□□□ 0.2
SYMPK-212ENST00000598896 NANOS2P60321 138 aaKnown RBP16.32■□□□□ 0.2
SYMPK-212ENST00000598896 COTL1Q14019 142 aa16.32■□□□□ 0.2
SYMPK-212ENST00000598896 SPATA12Q7Z6I5 190 aa16.32■□□□□ 0.2
SYMPK-212ENST00000598896 C11orf45Q8TAV5 145 aa16.32■□□□□ 0.2
SYMPK-212ENST00000598896 Q8N976 141 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 DEFA6Q01524 100 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 CDPF1Q6NVV7 123 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 NTM-AS1Q6ZSK4 140 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 IFI27L1Q96BM0 104 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 CHCHD7Q9BUK0 85 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 CYSLTR1Q9Y271 337 aa16.31■□□□□ 0.2
SYMPK-212ENST00000598896 SYS1-DBNDD2H3BUS1 97 aa16.3■□□□□ 0.2
SYMPK-212ENST00000598896 C20orf203Q8NBC4 194 aa16.3■□□□□ 0.2
SYMPK-212ENST00000598896 SMIM6P0DI80 62 aa16.29■□□□□ 0.2
SYMPK-212ENST00000598896 MAP1LC3CQ9BXW4 147 aa16.29■□□□□ 0.2
SYMPK-212ENST00000598896 H0Y8G0 127 aa16.29■□□□□ 0.2
SYMPK-212ENST00000598896 PRKDCP78527 4128 aaKnown RBP16.28■□□□□ 0.2
SYMPK-212ENST00000598896 SCGB1D1O95968 90 aa16.27■□□□□ 0.2
SYMPK-212ENST00000598896 SCGB3A1Q96QR1 104 aa16.27■□□□□ 0.2
SYMPK-212ENST00000598896 G0S2P27469 103 aa16.27■□□□□ 0.19
SYMPK-212ENST00000598896 IGIPA6NJ69 53 aa16.26■□□□□ 0.19
SYMPK-212ENST00000598896 ATP5LO75964 103 aa16.26■□□□□ 0.19
SYMPK-212ENST00000598896 LINC00518Q8N0U6 118 aa16.26■□□□□ 0.19
SYMPK-212ENST00000598896 A0A096LPF7 62 aa16.25■□□□□ 0.19
SYMPK-212ENST00000598896 ERASQ7Z444 233 aa16.25■□□□□ 0.19
SYMPK-212ENST00000598896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-212ENST00000598896 IGKV2-29A2NJV5 120 aaPredicted RBP16.25■□□□□ 0.19
SYMPK-212ENST00000598896 ATP6V0E2Q8NHE4 81 aa16.25■□□□□ 0.19
SYMPK-212ENST00000598896 GTSF1LQ9H1H1 148 aa16.25■□□□□ 0.19
SYMPK-212ENST00000598896 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.24■□□□□ 0.19
SYMPK-212ENST00000598896 C12orf57Q99622 126 aa16.24■□□□□ 0.19
SYMPK-212ENST00000598896 PET117Q6UWS5 81 aa16.22■□□□□ 0.19
SYMPK-212ENST00000598896 LINC01549A6NIU2 74 aa16.22■□□□□ 0.19
SYMPK-212ENST00000598896 PMCHL2Q9BQD1 86 aa16.22■□□□□ 0.19
SYMPK-212ENST00000598896 DEFB131BA0A096LNP1 70 aa16.21■□□□□ 0.19
SYMPK-212ENST00000598896 CEMP1Q6PRD7 247 aaPredicted RBP16.21■□□□□ 0.19
SYMPK-212ENST00000598896 TIMM17AQ99595 171 aa16.21■□□□□ 0.19
SYMPK-212ENST00000598896 PRSS1P07477 247 aa16.2■□□□□ 0.18
SYMPK-212ENST00000598896 LINC01545Q5VT33 79 aa16.2■□□□□ 0.18
SYMPK-212ENST00000598896 OPRPNQ99935 248 aaPredicted RBP16.2■□□□□ 0.18
SYMPK-212ENST00000598896 STAB2Q8WWQ8 2551 aa16.2■□□□□ 0.18
SYMPK-212ENST00000598896 TRBV6-8A0A0A6YYG3 113 aa16.2■□□□□ 0.18
SYMPK-212ENST00000598896 BAALCQ8WXS3 180 aa16.2■□□□□ 0.18
SYMPK-212ENST00000598896 UBE2D4Q9Y2X8 147 aa16.2■□□□□ 0.18
SYMPK-212ENST00000598896 Q6ZN92 141 aa16.19■□□□□ 0.18
SYMPK-212ENST00000598896 FAM104AQ969W3 186 aa16.19■□□□□ 0.18
SYMPK-212ENST00000598896 ICOSQ9Y6W8 199 aa16.19■□□□□ 0.18
SYMPK-212ENST00000598896 TRBV25-1A0A075B6N4 114 aa16.18■□□□□ 0.18
SYMPK-212ENST00000598896 MRPL23Q16540 153 aaKnown RBP16.18■□□□□ 0.18
SYMPK-212ENST00000598896 ATOH7Q8N100 152 aa16.18■□□□□ 0.18
SYMPK-212ENST00000598896 TMEM141Q96I45 108 aa16.18■□□□□ 0.18
SYMPK-212ENST00000598896 H3BNG1 76 aa16.17■□□□□ 0.18
SYMPK-212ENST00000598896 ZC2HC1BQ5TFG8 222 aa16.17■□□□□ 0.18
SYMPK-212ENST00000598896 TMEM243Q9BU79 118 aa16.17■□□□□ 0.18
SYMPK-212ENST00000598896 PYGO1Q9Y3Y4 419 aa16.17■□□□□ 0.18
SYMPK-212ENST00000598896 IGLV4-3A0A075B6K6 122 aa16.16■□□□□ 0.18
SYMPK-212ENST00000598896 NHLRC4P0CG21 123 aaPredicted RBP16.16■□□□□ 0.18
SYMPK-212ENST00000598896 ODF1Q14990 250 aa16.16■□□□□ 0.18
SYMPK-212ENST00000598896 LGALS9CQ6DKI2 356 aa16.16■□□□□ 0.18
SYMPK-212ENST00000598896 C20orf202A1L168 122 aa16.15■□□□□ 0.18
SYMPK-212ENST00000598896 TMEM97Q5BJF2 176 aa16.15■□□□□ 0.18
SYMPK-212ENST00000598896 TEX43Q6ZNM6 134 aa16.15■□□□□ 0.18
SYMPK-212ENST00000598896 TRAV10A0A0B4J240 114 aa16.14■□□□□ 0.17
SYMPK-212ENST00000598896 SPANXA1Q9NS26 97 aa16.14■□□□□ 0.17
SYMPK-212ENST00000598896 FGF6P10767 208 aa16.14■□□□□ 0.17
SYMPK-212ENST00000598896 TRAV12-1A0A0B4J245 112 aa16.13■□□□□ 0.17
SYMPK-212ENST00000598896 A0A087WX48 190 aa16.12■□□□□ 0.17
SYMPK-212ENST00000598896 PRSS29PA6NIE9 313 aa16.12■□□□□ 0.17
SYMPK-212ENST00000598896 MRPL52Q86TS9 123 aaKnown RBP16.12■□□□□ 0.17
SYMPK-212ENST00000598896 RNASE13Q5GAN3 156 aaKnown RBP16.12■□□□□ 0.17
SYMPK-212ENST00000598896 Q6ZUT4 128 aa16.12■□□□□ 0.17
SYMPK-212ENST00000598896 TIMM21Q9BVV7 248 aa16.12■□□□□ 0.17
SYMPK-212ENST00000598896 MRPL35Q9NZE8 188 aaKnown RBP16.12■□□□□ 0.17
SYMPK-212ENST00000598896 UBE2L6O14933 153 aa16.11■□□□□ 0.17
SYMPK-212ENST00000598896 PMVKQ15126 192 aa16.11■□□□□ 0.17
SYMPK-212ENST00000598896 MAJINQ3KP22 176 aa16.11■□□□□ 0.17
SYMPK-212ENST00000598896 SH2D6Q7Z4S9 175 aa16.11■□□□□ 0.17
SYMPK-212ENST00000598896 CHCHD5Q9BSY4 110 aa16.11■□□□□ 0.17
SYMPK-212ENST00000598896 CST9LQ9H4G1 147 aa16.11■□□□□ 0.17
SYMPK-212ENST00000598896 GAGE6Q13070 117 aa16.1■□□□□ 0.17
SYMPK-212ENST00000598896 H7C423 109 aa16.09■□□□□ 0.17
SYMPK-212ENST00000598896 NPSP0C0P6 89 aa16.09■□□□□ 0.17
SYMPK-212ENST00000598896 CSDC2Q9Y534 153 aaKnown RBP16.09■□□□□ 0.17
SYMPK-212ENST00000598896 AMELXQ99217 191 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms