RNA–Protein interactions for RNA: ENST00000596398.5

LINC00343-204, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 809 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-204ENST00000596398 SYNE2Q8WXH0 6885 aaKnown RBP4.32□□□□□ -1.72
LINC00343-204ENST00000596398 A0A087X002 238 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 PAGE4O60829 102 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 CFC1BP0CG36 223 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 BCL2P10415 239 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 PCP4P48539 62 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 ASB16-AS1Q495Z4 193 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 TMEM97Q5BJF2 176 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 CST9LP1Q5W188 147 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 CHCHD10Q8WYQ3 142 aaPredicted RBP4.32□□□□□ -1.72
LINC00343-204ENST00000596398 SLC25A21Q9BQT8 299 aaPredicted RBP4.32□□□□□ -1.72
LINC00343-204ENST00000596398 FLVCR2Q9UPI3 526 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 PKIGQ9Y2B9 76 aa4.32□□□□□ -1.72
LINC00343-204ENST00000596398 IGLV5-37A0A075B6J1 123 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 LOC107984640A0A0U1RRK4 108 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 KRBOX1C9JBD0 128 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 FAUP35544 74 aaKnown RBP4.31□□□□□ -1.72
LINC00343-204ENST00000596398 HBG1P69891 147 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 HBG2P69892 147 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 FLI1Q01543 452 aaPredicted RBP4.31□□□□□ -1.72
LINC00343-204ENST00000596398 SYCNQ0VAF6 134 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 KRTAP19-2Q3LHN2 52 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 KHDC3LQ587J8 217 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 TMEM252Q8N6L7 170 aa4.31□□□□□ -1.72
LINC00343-204ENST00000596398 TMSB15BA0A087X1C1 80 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 FAM168BA1KXE4 195 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 FABP5P3A8MUU1 101 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 TCRAP04437 139 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 TPT1P13693 172 aaKnown RBP4.3□□□□□ -1.72
LINC00343-204ENST00000596398 DEFA3P59666 94 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 DNLZQ5SXM8 178 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 FAM162BQ5T6X4 162 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 LINC00173Q6ZV60 143 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 STX12Q86Y82 276 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 OR5C1Q8NGR4 320 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 TYMSOSQ8TAI1 123 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 TMEM243Q9BU79 118 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 PPDPFQ9H3Y8 114 aa4.3□□□□□ -1.72
LINC00343-204ENST00000596398 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
LINC00343-204ENST00000596398 TRAV6A0A075B6T7 132 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 FAM25EA8MYX2 175 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 HMGB3O15347 200 aaKnown RBP4.29□□□□□ -1.72
LINC00343-204ENST00000596398 NOL3O60936 208 aaKnown RBP4.29□□□□□ -1.72
LINC00343-204ENST00000596398 CAMPP49913 170 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 CRIP1P50238 77 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 ATP6V1FQ16864 119 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 ZFP82Q8N141 532 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 TOMM5Q8N4H5 51 aa4.29□□□□□ -1.72
LINC00343-204ENST00000596398 RSL24D1Q9UHA3 163 aaKnown RBP4.29□□□□□ -1.72
LINC00343-204ENST00000596398 MUC21A0A140T8X8 626 aa4.28□□□□□ -1.72
LINC00343-204ENST00000596398 FGF6P10767 208 aa4.28□□□□□ -1.72
LINC00343-204ENST00000596398 XCL1P47992 114 aa4.28□□□□□ -1.72
LINC00343-204ENST00000596398 TAS2R45P59539 299 aa4.28□□□□□ -1.72
LINC00343-204ENST00000596398 RPL18AQ02543 176 aaKnown RBP4.28□□□□□ -1.72
LINC00343-204ENST00000596398 ZNF471Q9BX82 626 aaPredicted RBP4.28□□□□□ -1.72
LINC00343-204ENST00000596398 Q9H521 79 aa4.28□□□□□ -1.72
LINC00343-204ENST00000596398 VCX3AQ9NNX9 186 aa4.28□□□□□ -1.72
LINC00343-204ENST00000596398 IGHV1-58A0A0C4DH39 117 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 SERTM2A0A1B0GWG4 89 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.27□□□□□ -1.73
LINC00343-204ENST00000596398 K7EQM0 130 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 UBE2L6O14933 153 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 SH2D1AO60880 128 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 PVALBP20472 110 aaPredicted RBP4.27□□□□□ -1.73
LINC00343-204ENST00000596398 RPL12P30050 165 aaKnown RBP4.27□□□□□ -1.73
LINC00343-204ENST00000596398 TMBIM6P55061 237 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 SSTP61278 116 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 MEF2BQ02080 365 aaPredicted RBP4.27□□□□□ -1.73
LINC00343-204ENST00000596398 SAPCD1Q5SSQ6 148 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 C5orf17Q8NAS9 161 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 OR10AG1Q8NH19 301 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 OPRPNQ99935 248 aaPredicted RBP4.27□□□□□ -1.73
LINC00343-204ENST00000596398 WDR61Q9GZS3 305 aaKnown RBP4.27□□□□□ -1.73
LINC00343-204ENST00000596398 ANAPC11Q9NYG5 84 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 ARL2-SNX15V9GYD0 113 aa4.27□□□□□ -1.73
LINC00343-204ENST00000596398 IGLV4-69A0A075B6H9 119 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 APOMO95445 188 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 CFC1P0CG37 223 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 AP3S2P59780 193 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 SPCS2Q15005 226 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 EIF5AL1Q6IS14 154 aaKnown RBP4.26□□□□□ -1.73
LINC00343-204ENST00000596398 FAM19A5Q7Z5A7 132 aaPredicted RBP4.26□□□□□ -1.73
LINC00343-204ENST00000596398 LINC00337Q8N6G1 96 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 NUP35Q8NFH5 326 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 KCNIP2Q9NS61 270 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 EPDR1Q9UM22 224 aa4.26□□□□□ -1.73
LINC00343-204ENST00000596398 A0A087WXM4 84 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 C17orf112F2Z3M2 114 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 CCL25O15444 150 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 NDUFB6O95139 128 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 TSHBP01222 138 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 NKX2-5P52952 324 aaPredicted RBP4.25□□□□□ -1.73
LINC00343-204ENST00000596398 KRTAP13-2Q52LG2 175 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 PYDC2Q56P42 97 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 PQLC2Q6ZP29 291 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 KRTAP7-1Q8IUC3 87 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 TMEM18Q96B42 140 aa4.25□□□□□ -1.73
LINC00343-204ENST00000596398 FLGP20930 4061 aaPredicted RBP4.25□□□□□ -1.73
LINC00343-204ENST00000596398 A0A0A0MQY5 61 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms