RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 Q9UF83 564 aa9.18□□□□□ -0.94
SHKBP1-209ENST00000595803 TRBV27A0A0K0K1C4 114 aa9.17□□□□□ -0.94
SHKBP1-209ENST00000595803 K7EMI3 77 aa9.17□□□□□ -0.94
SHKBP1-209ENST00000595803 FCER1GP30273 86 aa9.17□□□□□ -0.94
SHKBP1-209ENST00000595803 LINC00310P59036 64 aa9.17□□□□□ -0.94
SHKBP1-209ENST00000595803 LAGE3Q14657 143 aa9.17□□□□□ -0.94
SHKBP1-209ENST00000595803 A0A0J9YY99 117 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 LOC100131303A0A0U1RQF7 123 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 GYPEP15421 78 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 AMTP48728 403 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 ORMDL2Q53FV1 153 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 Q6ZTC4 211 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 FAM19A2Q8N3H0 131 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 PHLDA1Q8WV24 401 aaPredicted RBP9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 TMEM18Q96B42 140 aa9.16□□□□□ -0.94
SHKBP1-209ENST00000595803 TRAV26-1A0A087WT03 109 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 IGHV3-38A0A0C4DH36 116 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 NUDT3O95989 172 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 G0S2P27469 103 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 UBE2D3P61077 147 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 UBE2D2P62837 147 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 DAZ4Q86SG3 579 aaKnown RBP9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 DEFB104AQ8WTQ1 72 aa9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 DAZ3Q9NR90 486 aaKnown RBP9.15□□□□□ -0.94
SHKBP1-209ENST00000595803 DEFB131BA0A096LNP1 70 aa9.14□□□□□ -0.95
SHKBP1-209ENST00000595803 COTL1Q14019 142 aa9.14□□□□□ -0.95
SHKBP1-209ENST00000595803 PMCHL1Q16048 86 aa9.14□□□□□ -0.95
SHKBP1-209ENST00000595803 VSIG2Q96IQ7 327 aa9.14□□□□□ -0.95
SHKBP1-209ENST00000595803 TRAV10A0A0B4J240 114 aa9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 IGHV1-24A0A0C4DH33 117 aa9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 TSHBP01222 138 aa9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 HBDP02042 147 aa9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 FABP4P15090 132 aa9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 BTF3P20290 206 aaKnown RBP9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 ATP6V0E2Q8NHE4 81 aa9.13□□□□□ -0.95
SHKBP1-209ENST00000595803 MRPL23Q16540 153 aaKnown RBP9.12□□□□□ -0.95
SHKBP1-209ENST00000595803 TMEM97Q5BJF2 176 aa9.12□□□□□ -0.95
SHKBP1-209ENST00000595803 PACRGQ96M98 296 aaPredicted RBP9.12□□□□□ -0.95
SHKBP1-209ENST00000595803 HIST1H2BLQ99880 126 aa9.12□□□□□ -0.95
SHKBP1-209ENST00000595803 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
SHKBP1-209ENST00000595803 H3BNG1 76 aa9.11□□□□□ -0.95
SHKBP1-209ENST00000595803 LEPROTL1O95214 131 aa9.11□□□□□ -0.95
SHKBP1-209ENST00000595803 SH2D6Q7Z4S9 175 aa9.11□□□□□ -0.95
SHKBP1-209ENST00000595803 LOC105371267A0A1B0GV96 52 aa9.1□□□□□ -0.95
SHKBP1-209ENST00000595803 IFITM10A6NMD0 228 aa9.1□□□□□ -0.95
SHKBP1-209ENST00000595803 GTSF1LQ9H1H1 148 aa9.1□□□□□ -0.95
SHKBP1-209ENST00000595803 HSPB8Q9UJY1 196 aa9.1□□□□□ -0.95
SHKBP1-209ENST00000595803 A0A096LPF7 62 aa9.09□□□□□ -0.95
SHKBP1-209ENST00000595803 LINC01549A6NIU2 74 aa9.09□□□□□ -0.95
SHKBP1-209ENST00000595803 LINC00694P0DN24 101 aa9.09□□□□□ -0.95
SHKBP1-209ENST00000595803 C2orf66Q6UXQ4 117 aa9.09□□□□□ -0.95
SHKBP1-209ENST00000595803 OR10D4PQ8NGN7 298 aa9.09□□□□□ -0.95
SHKBP1-209ENST00000595803 CYSLTR1Q9Y271 337 aa9.09□□□□□ -0.95
SHKBP1-209ENST00000595803 A0A096LNJ9 63 aa9.08□□□□□ -0.96
SHKBP1-209ENST00000595803 AKR1D1P51857 326 aa9.08□□□□□ -0.96
SHKBP1-209ENST00000595803 C20orf203Q8NBC4 194 aa9.08□□□□□ -0.96
SHKBP1-209ENST00000595803 TOMM6Q96B49 74 aa9.08□□□□□ -0.96
SHKBP1-209ENST00000595803 SCGB3A1Q96QR1 104 aa9.08□□□□□ -0.96
SHKBP1-209ENST00000595803 ALMS1Q8TCU4 4167 aa9.08□□□□□ -0.96
SHKBP1-209ENST00000595803 KIAA1109Q2LD37 5005 aa9.07□□□□□ -0.96
SHKBP1-209ENST00000595803 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
SHKBP1-209ENST00000595803 ATP5LO75964 103 aa9.07□□□□□ -0.96
SHKBP1-209ENST00000595803 NTM-AS1Q6ZSK4 140 aa9.07□□□□□ -0.96
SHKBP1-209ENST00000595803 CHCHD7Q9BUK0 85 aa9.07□□□□□ -0.96
SHKBP1-209ENST00000595803 TRBV6-8A0A0A6YYG3 113 aa9.06□□□□□ -0.96
SHKBP1-209ENST00000595803 KRTDAPP60985 99 aa9.06□□□□□ -0.96
SHKBP1-209ENST00000595803 IFI27L1Q96BM0 104 aa9.06□□□□□ -0.96
SHKBP1-209ENST00000595803 TMEM243Q9BU79 118 aa9.06□□□□□ -0.96
SHKBP1-209ENST00000595803 MAP1LC3CQ9BXW4 147 aa9.06□□□□□ -0.96
SHKBP1-209ENST00000595803 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 IGKV2-29A2NJV5 120 aaPredicted RBP9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 UBE2L6O14933 153 aa9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 RPL39P62891 51 aaKnown RBP9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 SMAGPQ0VAQ4 97 aa9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 LINC00173Q6ZV60 143 aa9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 ERASQ7Z444 233 aa9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 C15orf53Q8NAA6 179 aa9.05□□□□□ -0.96
SHKBP1-209ENST00000595803 IGLL5B9A064 214 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 PRSS1P07477 247 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 LYPD5Q6UWN5 251 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 Q6ZN92 141 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 TMEM141Q96I45 108 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 CHCHD5Q9BSY4 110 aa9.04□□□□□ -0.96
SHKBP1-209ENST00000595803 H7C423 109 aa9.03□□□□□ -0.96
SHKBP1-209ENST00000595803 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
SHKBP1-209ENST00000595803 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 TMEM262E9PQX1 116 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 TIRAPP58753 221 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 GAGE6Q13070 117 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 LELP1Q5T871 98 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 AMMECR1LQ6DCA0 310 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 CEMP1Q6PRD7 247 aaPredicted RBP9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 TMEM101Q96IK0 257 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 TIMM17AQ99595 171 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.97
SHKBP1-209ENST00000595803 PLECQ15149 4684 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms